BLASTX nr result

ID: Coptis23_contig00018376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018376
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305604.1| predicted protein [Populus trichocarpa] gi|2...   139   1e-30
ref|XP_002266933.1| PREDICTED: uncharacterized protein LOC100258...   134   2e-29
ref|XP_004145101.1| PREDICTED: uncharacterized protein LOC101211...   132   2e-28
ref|XP_002518522.1| conserved hypothetical protein [Ricinus comm...   128   2e-27
ref|XP_003536549.1| PREDICTED: uncharacterized protein LOC100788...   126   6e-27

>ref|XP_002305604.1| predicted protein [Populus trichocarpa] gi|222848568|gb|EEE86115.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  139 bits (349), Expect = 1e-30
 Identities = 67/92 (72%), Positives = 76/92 (82%)
 Frame = -1

Query: 843 MATKIKGIYKGFKCISQIFVVKERELEIGYPTDVKHVAHIGWDGQSDNAPSWMKEFKTAP 664
           MATKIKGIYKGFK ISQIFVVKERE+EIGYPTDVKHVAHIGWDG S +APSWM EFKT P
Sbjct: 1   MATKIKGIYKGFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGSAPSWMNEFKTPP 60

Query: 663 DFSTVSVSDKSASRNSNGVTAPSWSSRDFDQN 568
           DFST +V++    R+S+ V    WSS+DFD +
Sbjct: 61  DFSTTTVAN---PRDSSSVILSPWSSQDFDHS 89


>ref|XP_002266933.1| PREDICTED: uncharacterized protein LOC100258839 [Vitis vinifera]
           gi|302144074|emb|CBI23179.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  134 bits (338), Expect = 2e-29
 Identities = 68/111 (61%), Positives = 86/111 (77%), Gaps = 7/111 (6%)
 Frame = -1

Query: 843 MATKIKGIYKGFKCISQIFVVKERELEIGYPTDVKHVAHIGWDGQSDNAPSWMKEFKTAP 664
           MATK+KGIYKGFK ISQIFVVKERE+EIGYPTDVKHVAHIGWDG S +APSWM E+K+  
Sbjct: 1   MATKMKGIYKGFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNEYKSTH 60

Query: 663 DFSTVSVSDKSASRNSNGVTAPS-WSSRDFDQN------SDIYKESPSPTE 532
           DFS+ S+      R++N + A S WSS+DF+Q+      S+++K+ P PT+
Sbjct: 61  DFSSSSLGSFIEPRDTNNIVARSTWSSQDFEQSMGQHPVSEMFKDCP-PTD 110


>ref|XP_004145101.1| PREDICTED: uncharacterized protein LOC101211354 [Cucumis sativus]
           gi|449472647|ref|XP_004153657.1| PREDICTED:
           uncharacterized protein LOC101222050 [Cucumis sativus]
           gi|449526766|ref|XP_004170384.1| PREDICTED:
           uncharacterized LOC101222050 [Cucumis sativus]
          Length = 159

 Score =  132 bits (331), Expect = 2e-28
 Identities = 72/110 (65%), Positives = 80/110 (72%), Gaps = 10/110 (9%)
 Frame = -1

Query: 843 MATKIKGIYKGFKCISQIFVVKERELEIGYPTDVKHVAHIGWDGQSDNAPSWMKEFKTAP 664
           M+ K+KGIYK FK ISQIFVVKERE+EIGYPTDVKHVAHIGWDG S  APSWM EFKTAP
Sbjct: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGTAPSWMNEFKTAP 60

Query: 663 D-FSTVSVSDKSASRNSN--GVTAP-SWSSRDFD------QNSDIYKESP 544
           + FS  S  D S  R+S+   VTAP +WSS DFD      Q SD + E P
Sbjct: 61  EHFSAASFGDISDRRDSSSTAVTAPTTWSSLDFDQAMLRQQTSDFFGELP 110


>ref|XP_002518522.1| conserved hypothetical protein [Ricinus communis]
           gi|223542367|gb|EEF43909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score =  128 bits (322), Expect = 2e-27
 Identities = 65/94 (69%), Positives = 79/94 (84%), Gaps = 2/94 (2%)
 Frame = -1

Query: 843 MATKIKGIYKG-FKCISQIFVVKERELEIGYPTDVKHVAHIGWDGQSDNAPSWMKEFKTA 667
           MATKIKGIYKG FK ISQIFVVKERE+EIGYPTDVKHVAHIGWDG S +APSWM +FKT 
Sbjct: 1   MATKIKGIYKGSFKFISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNDFKTP 60

Query: 666 PDFSTVSVSDKSASRNSNGVTAPS-WSSRDFDQN 568
           PDFS+ ++++   +R+S+ +   S WSS+DFDQ+
Sbjct: 61  PDFSSTTLAN---TRDSDSIANFSPWSSQDFDQS 91


>ref|XP_003536549.1| PREDICTED: uncharacterized protein LOC100788423 [Glycine max]
          Length = 186

 Score =  126 bits (317), Expect = 6e-27
 Identities = 67/108 (62%), Positives = 78/108 (72%), Gaps = 7/108 (6%)
 Frame = -1

Query: 843 MATKIKGIYKGFKCISQIFVVKERELEIGYPTDVKHVAHIGWDGQSDNAPSWMKEFKTAP 664
           MAT +KGIYK FK I+QIFVVKERE+EIGYPTDVKHVAHIGWDG S   PSWM +FKTAP
Sbjct: 1   MATTLKGIYKSFKYITQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGTGPSWMNDFKTAP 60

Query: 663 DFST-VSVSDKSASRNSNGVTAPSWSSRDFD------QNSDIYKESPS 541
           DFST +    + +  N+  VT  SWSS+DF+        S+IYK  PS
Sbjct: 61  DFSTSLGNLGELSDPNAMAVTT-SWSSQDFEVSTGSQPTSNIYKGIPS 107


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