BLASTX nr result

ID: Coptis23_contig00018372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018372
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG52024.1|AC022456_5 Tam1 transposon protein TNP2, putative;...   115   5e-24
ref|XP_003633421.1| PREDICTED: uncharacterized protein LOC100853...   108   3e-22
ref|XP_003632018.1| PREDICTED: uncharacterized protein LOC100853...   108   6e-22
emb|CAN80203.1| hypothetical protein VITISV_030059 [Vitis vinifera]   105   5e-21
ref|XP_003634239.1| PREDICTED: uncharacterized protein LOC100854...   104   6e-21

>gb|AAG52024.1|AC022456_5 Tam1 transposon protein TNP2, putative; 12762-16371 [Arabidopsis
            thaliana]
          Length = 887

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/145 (38%), Positives = 89/145 (61%)
 Frame = +1

Query: 1    LEGRPTSKERPVSLTDEMLESAHRYVLFNMVVVEPYVKLHLDELKHLEPRLSKNESLLWA 180
            LEGRP S    ++L++     AH  V+ NM  ++ YV +HL  L+   PR  ++ S LW+
Sbjct: 694  LEGRPISAGTSITLSEMDKNIAHLAVIQNMAALDQYVDMHLQHLQDSNPRCRRDASHLWS 753

Query: 181  RHVASFSSWLRQKVTDEEKKTKISNLLKWLAYGPRNQAMSCSCYIIKGQRFHTKDGEKST 360
             H  +++SWL++++      T+  +++KW+AYGPR  A S + YI+ G RFHT   ++ +
Sbjct: 754  MHAKNYASWLKEQIP--LGSTEHEDIIKWIAYGPRCSARSFTGYIVNGHRFHTSSLQRQS 811

Query: 361  QDSGICINSKTLC*SSSKDTNQVFD 435
            Q+SGI   S  +C SS+KD +QV D
Sbjct: 812  QNSGIYYESTAMCRSSAKDNSQVVD 836


>ref|XP_003633421.1| PREDICTED: uncharacterized protein LOC100853694 [Vitis vinifera]
          Length = 1019

 Score =  108 bits (271), Expect = 3e-22
 Identities = 62/145 (42%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
 Frame = +1

Query: 7    GRPTSKERPVSLTD-EMLESAHRYVLFNMVVVEPYVKLHLDELKHLEPRLSKNESLLWAR 183
            G P    R +++ D +++E AH YVL N ++V+P+++ H+  LK   PR SK    L   
Sbjct: 734  GEPLLGGRAITIHDYKLVEQAHHYVLQNTIIVQPFIEEHMKYLKTKYPRQSKRVKWLEDE 793

Query: 184  HVASFSSWLRQKVTDE-EKKTKISNLLKWLAYGPRNQAMSCSCYIIKGQRFHTK--DGEK 354
            HV +FS WLR+KV+D+  KK  I   LKWLA GPR Q ++   YII G R+H K  D  +
Sbjct: 794  HVRTFSHWLRKKVSDDISKKEPIEKELKWLAQGPRQQVLTYPGYIIHGCRYHIKNRDEAR 853

Query: 355  STQDSGICINSKTLC*SSSKDTNQV 429
              Q+SG+ I + T+   SSKD N V
Sbjct: 854  VNQNSGVSIVASTMQIESSKDKNPV 878


>ref|XP_003632018.1| PREDICTED: uncharacterized protein LOC100853148 [Vitis vinifera]
          Length = 989

 Score =  108 bits (269), Expect = 6e-22
 Identities = 62/145 (42%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
 Frame = +1

Query: 7    GRPTSKERPVSLTD-EMLESAHRYVLFNMVVVEPYVKLHLDELKHLEPRLSKNESLLWAR 183
            G+P    R +++ D +++E AH YVL N  +V+P++  H+  LK   PR SK    L   
Sbjct: 704  GKPLLGGRAITIHDYKLVEQAHHYVLQNTTIVQPFIDEHMKYLKTKYPRQSKRVKWLEDE 763

Query: 184  HVASFSSWLRQKVTDE-EKKTKISNLLKWLAYGPRNQAMSCSCYIIKGQRFHTK--DGEK 354
            HV +FS WLR+KV+D+  KK  I   LKWLA GPR Q ++   YII G R+H K  D  +
Sbjct: 764  HVRTFSHWLRKKVSDDISKKEPIEKELKWLAQGPRQQVLTYPGYIIHGCRYHIKNRDEAR 823

Query: 355  STQDSGICINSKTLC*SSSKDTNQV 429
              Q+SG+ I + T+  +SSKD N V
Sbjct: 824  VNQNSGVSIVASTMQIASSKDKNPV 848


>emb|CAN80203.1| hypothetical protein VITISV_030059 [Vitis vinifera]
          Length = 772

 Score =  105 bits (261), Expect = 5e-21
 Identities = 58/145 (40%), Positives = 86/145 (59%), Gaps = 3/145 (2%)
 Frame = +1

Query: 7   GRPTSKERPVSLTDEMLESAHRYVLFNMVVVEPYVKLHLDELKHLEPRLSKNESLLWARH 186
           GRP +  R  ++  +    AH YVL N  +V+PY++ H++ LK   PR SK +  L   H
Sbjct: 487 GRPITXGRSTNIDHKSWLQAHHYVLENTTIVQPYIEEHMNWLKSQYPRQSKRQIWLQEEH 546

Query: 187 VASFSSWLRQKVTDE-EKKTKISNLLKWLAYGPRNQAMSCSCYIIKGQRFHTKDGEKS-- 357
           +  F+ WL+ KV +       ISN L+WLA+GP +Q +    YII G R+HTK+ + +  
Sbjct: 547 MRCFTYWLKGKVEEAIHNGQDISNTLRWLAHGPTHQVVKYPGYIINGCRYHTKERDMTCV 606

Query: 358 TQDSGICINSKTLC*SSSKDTNQVF 432
           TQ+SG+ I + T+  +SSKD N VF
Sbjct: 607 TQNSGVSILAGTMQIASSKDKNPVF 631


>ref|XP_003634239.1| PREDICTED: uncharacterized protein LOC100854961 [Vitis vinifera]
          Length = 982

 Score =  104 bits (260), Expect = 6e-21
 Identities = 61/145 (42%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
 Frame = +1

Query: 7    GRPTSKERPVSLTD-EMLESAHRYVLFNMVVVEPYVKLHLDELKHLEPRLSKNESLLWAR 183
            G+P    R +++ D +++E AH YVL N  +V+P++  H+  LK   PR SK    L   
Sbjct: 697  GKPLLGGRAITIHDYKLVEQAHHYVLQNTTIVQPFIDEHMKYLKTKYPRQSKRVKWLEDE 756

Query: 184  HVASFSSWLRQKVTDE-EKKTKISNLLKWLAYGPRNQAMSCSCYIIKGQRFHTK--DGEK 354
            HV +FS WLR+KV+D+  KK  I   LKWLA GPR Q ++   YII G  +H K  D  +
Sbjct: 757  HVLTFSHWLRKKVSDDISKKEPIEKELKWLAQGPRQQVLTYLGYIIHGCCYHIKNRDEAR 816

Query: 355  STQDSGICINSKTLC*SSSKDTNQV 429
              Q+SG+ I + T+  +SSKD N V
Sbjct: 817  VNQNSGVSIVASTMQIASSKDKNPV 841


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