BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018370
         (3817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-contain...  1110   0.0  
emb|CBI32139.3| unnamed protein product [Vitis vinifera]             1107   0.0  
emb|CBI34941.3| unnamed protein product [Vitis vinifera]             1014   0.0  
ref|XP_002525350.1| DNA binding protein, putative [Ricinus commu...  1014   0.0  
ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyr...   966   0.0  

>ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2060

 Score = 1110 bits (2872), Expect = 0.0
 Identities = 608/1168 (52%), Positives = 783/1168 (67%), Gaps = 25/1168 (2%)
 Frame = -2

Query: 3465 FGDNARSAEAGADGNGGSLSQQLNDMVPVQYEDFFVLQLGKIDMRPSYHIRTQIWPVGYQ 3286
            F +N R   A  +  GG   Q  N+  PVQ+EDF++L LGKID RPSYH  + IWPVGY+
Sbjct: 154  FRNNLRVTAAEPEEMGGCDFQYANNEFPVQFEDFYILSLGKIDSRPSYHNSSLIWPVGYK 213

Query: 3285 SSWHDKFTGSIFTCVVLDGGDNGPVFKVRRYPCSTALISSGSTIL----FTTTGRLEAYN 3118
            SSWHDK TGS F C VLD GD+GPVFKVRR+PCS   I + ST+L    FT     +  N
Sbjct: 214  SSWHDKITGSFFVCDVLDDGDSGPVFKVRRFPCSMQPIINASTVLSMPNFTQN---DVKN 270

Query: 3117 KVESDAVSTSNIGREEDDTVQMYLSDPDPRG--QDLLSC----LGSDKNEAYNWDGMPXX 2956
            KV SD  ++  +  ++D ++QM  S+ DP     D+LSC    L  D +           
Sbjct: 271  KVGSDNSASFGMDDDDDSSIQMIFSENDPPNLDYDVLSCSQNGLNEDCDVQTKSSSQTES 330

Query: 2955 XXXXXXXXXXXLPENIGSRDEIGEYCVEGRSTSMVWAEVTEKLVGACCEVFNKSGSLQLY 2776
                       +  N+   D IGE+ VE  S+S  W++V++ +V ACCE + ++G LQ  
Sbjct: 331  NCRLLQSSGKLVLSNLRVEDNIGEFLVEASSSSSAWSKVSQTVVHACCEAYKQTGVLQFC 390

Query: 2775 CKHELGR--RDSGSMNNNSEGMLGALTKFCSMSGPVNIPHVIQNVNELDTSCKALSKWLE 2602
            CKH+L +      ++N ++   +G+L KFC+  GP+NIP  IQN + LDTSC AL KWL+
Sbjct: 391  CKHDLDQIWTPYATLNADAAASIGSLAKFCNFCGPINIPCCIQNDSVLDTSCDALIKWLD 450

Query: 2601 QDRFGLDVEFVQELIVQLPGSHSCSAYEFPYKKKNHS---------ILQKRKSGIHGEDV 2449
            QDRFGLDVEFVQE+I  LPG H+CS YEF  ++ ++S         +L KRKS + G + 
Sbjct: 451  QDRFGLDVEFVQEIIEHLPGVHACSEYEFLNRRTHNSTPQTFRSGFLLAKRKSEVQGGEK 510

Query: 2448 LAFDNLLKDYKRPRRQGSLQTHEKDVQFPPPGKSLSAKLSAELVSDILQICEFLWRFYEI 2269
                NL K  KRPR+Q       +D    PPGK LS  L A+L+ D+LQI E LWRF E+
Sbjct: 511  AG--NLFK-CKRPRKQVVESPVIRDCC--PPGKPLSLTLPADLIGDVLQIWESLWRFSEV 565

Query: 2268 LGMSEPISFXXXXXXLVNPWSDGSKYLEKIEKEIQDTKIFSRGNDDTIIRSLSAKGESTA 2089
            LG+ EPISF                  E++E+E+ D  +         + S SA G S  
Sbjct: 566  LGLEEPISF------------------EELEEELLDCNLS--------LCSASASGVS-- 597

Query: 2088 AGPGENITSFITVETGSAKEATQARQASRTYYKCTGVALTNVHSSLLKVLVGELQAKVAP 1909
               G+N  +  T+ET S +EA+QAR AS  Y +  GVALT  HS+LLKVLVGEL +KVA 
Sbjct: 598  ---GKNAQALNTMETESKREASQARLASHNYGRFIGVALTKAHSALLKVLVGELLSKVAA 654

Query: 1908 LADPNFDAGESKSKRGRKKDVDSSFLLKTSKIEMLPVNELTWPELARRYVLAVLSMDSNF 1729
             ADPNFDAGESKS+RGRKKD D+   +K  K++ LP+NELTWPELARRY+L + S++  F
Sbjct: 655  FADPNFDAGESKSRRGRKKDADNLIPVKKMKVDKLPINELTWPELARRYILTISSLEGKF 714

Query: 1728 DSSETSNQEGGKVFRCLQGDGGVLCGALTGVAGMEADALLLAEATKQICGSLKRENDVWP 1549
            D +E +++EG KVFRCLQGDGG LCG+LTGVAGMEADALLLAEAT +I GS+K +ND+  
Sbjct: 715  DCAEINSREGWKVFRCLQGDGGTLCGSLTGVAGMEADALLLAEATIKIFGSVKSKNDILR 774

Query: 1548 IVEETDTEAIDTCETAGGDGSSMPEWALPLEPVRKLPTNVGTRIRKCVYEALDKDPPEWA 1369
            I +   ++A+   +TA  +   +P+WA  LEPVRKLPTNVG RIRKCVY+ALD DPPEWA
Sbjct: 775  I-DCIKSDAVGAYKTAELNDGEIPKWAQVLEPVRKLPTNVGARIRKCVYDALDNDPPEWA 833

Query: 1368 RKILEHSISKQVYKGNASGPTKKAVVSVLADARTKCVERKPEKQKKEKGFITVSDIITKQ 1189
            +KIL+HSISK+VYKGNASGPTKKAV+++LAD  +  V+R+P+K++K K   + SD+I KQ
Sbjct: 834  KKILKHSISKEVYKGNASGPTKKAVIALLADVHSGNVQRRPDKKRKGKRVRSASDLIMKQ 893

Query: 1188 CRSVLRRAAAADESRTFCNLLGTTSLHPNDNEDEGFLGSPAMVSRPLDFRTIDLRLAVGY 1009
            CR+VLRR A+ D+ + FCNLLG   + PNDN+D+G LG PAMVSRPLDFRTIDLRLAVG 
Sbjct: 894  CRTVLRRVASTDKEKVFCNLLGRI-MDPNDNDDKGLLGFPAMVSRPLDFRTIDLRLAVGA 952

Query: 1008 YGGSHEAFQEDVHEVWHNIRIAYGDRPELMQLAETLSQNFESLYEKEVLTLVQKCREQAN 829
            YGGS+EAF EDV EVWHNI IAY D  ++  LAE LS++FESLY KEVLTLVQK    AN
Sbjct: 953  YGGSNEAFLEDVQEVWHNICIAYRDSDDI-SLAEALSKDFESLYSKEVLTLVQKFMSYAN 1011

Query: 828  PESSSLEAKKELIETLNGANGIPKAPWDEGVCKVCGIDKDDESVLLCDTCDSEYHTYCLV 649
             E  + EAKKEL +T+  A+ IPKAPWDEG+CKVCG+DKDD++VLLCD CDSEYHTYCL 
Sbjct: 1012 VEFLNAEAKKELEDTIACADEIPKAPWDEGLCKVCGVDKDDDNVLLCDACDSEYHTYCLN 1071

Query: 648  PPLARIPEGNWYCPSCVASKCKAQHASKRPKASGRRRQRRYQGENSRAFSEALSRLAITM 469
            PPLARIPEGNWYCPSCVA++  +Q  S+  +   R R++RYQGE +R + E L+ LA  M
Sbjct: 1072 PPLARIPEGNWYCPSCVAAQRLSQGTSRSAEVFSRCRRKRYQGEFTRTYLETLTHLATIM 1131

Query: 468  GEKEYWEFNVEERIFLLKFLCDEVLNSVIIRDHLDQCADMSSDLQQKLRSLSGDLRNLKF 289
              KEY E ++EER+FLLKF C+EVLNS IIR+HL+QCA +S+DLQQKLR+LS + RNLK 
Sbjct: 1132 EIKEYCELSIEERVFLLKFFCEEVLNSAIIREHLEQCASLSADLQQKLRTLSLERRNLKL 1191

Query: 288  REENLASRSMKDNIITFNGV-LDAGRDKPATVLTNHGRCIGQQQTFNNKCNGYVPPTGHL 112
            REE LA +  K N +  +GV  +AG +  A +L N+ + + Q    +N    +      L
Sbjct: 1192 REEILAVKVEKANSVGLDGVGGEAGTEAVAMMLKNYSKLMVQPLNKSNYFASFPSNLVSL 1251

Query: 111  PETQDVTEESNL---PSLFYSKVISENH 37
             + Q   E+++    P  F +K   E H
Sbjct: 1252 EDGQQENEQNDFNKPPYWFNAKGFLEKH 1279


>emb|CBI32139.3| unnamed protein product [Vitis vinifera]
          Length = 1789

 Score = 1107 bits (2864), Expect = 0.0
 Identities = 601/1127 (53%), Positives = 769/1127 (68%), Gaps = 25/1127 (2%)
 Frame = -2

Query: 3408 SQQLNDMVPVQYEDFFVLQLGKIDMRPSYHIRTQIWPVGYQSSWHDKFTGSIFTCVVLDG 3229
            S +  +  PVQ+EDF++L LGKID RPSYH  + IWPVGY+SSWHDK TGS F C VLD 
Sbjct: 40   SYRFENEFPVQFEDFYILSLGKIDSRPSYHNSSLIWPVGYKSSWHDKITGSFFVCDVLDD 99

Query: 3228 GDNGPVFKVRRYPCSTALISSGSTIL----FTTTGRLEAYNKVESDAVSTSNIGREEDDT 3061
            GD+GPVFKVRR+PCS   I + ST+L    FT     +  NKV SD  ++  +  ++D +
Sbjct: 100  GDSGPVFKVRRFPCSMQPIINASTVLSMPNFTQN---DVKNKVGSDNSASFGMDDDDDSS 156

Query: 3060 VQMYLSDPDPRG--QDLLSC----LGSDKNEAYNWDGMPXXXXXXXXXXXXXLPENIGSR 2899
            +QM  S+ DP     D+LSC    L  D +                      +  N+   
Sbjct: 157  IQMIFSENDPPNLDYDVLSCSQNGLNEDCDVQTKSSSQTESNCRLLQSSGKLVLSNLRVE 216

Query: 2898 DEIGEYCVEGRSTSMVWAEVTEKLVGACCEVFNKSGSLQLYCKHELGR--RDSGSMNNNS 2725
            D IGE+ VE  S+S  W++V++ +V ACCE + ++G LQ  CKH+L +      ++N ++
Sbjct: 217  DNIGEFLVEASSSSSAWSKVSQTVVHACCEAYKQTGVLQFCCKHDLDQIWTPYATLNADA 276

Query: 2724 EGMLGALTKFCSMSGPVNIPHVIQNVNELDTSCKALSKWLEQDRFGLDVEFVQELIVQLP 2545
               +G+L KFC+  GP+NIP  IQN + LDTSC AL KWL+QDRFGLDVEFVQE+I  LP
Sbjct: 277  AASIGSLAKFCNFCGPINIPCCIQNDSVLDTSCDALIKWLDQDRFGLDVEFVQEIIEHLP 336

Query: 2544 GSHSCSAYEFPYKKKNHS---------ILQKRKSGIHGEDVLAFDNLLKDYKRPRRQGSL 2392
            G H+CS YEF  ++ ++S         +L KRKS + G +     NL K  KRPR+Q   
Sbjct: 337  GVHACSEYEFLNRRTHNSTPQTFRSGFLLAKRKSEVQGGEKAG--NLFK-CKRPRKQVVE 393

Query: 2391 QTHEKDVQFPPPGKSLSAKLSAELVSDILQICEFLWRFYEILGMSEPISFXXXXXXLVNP 2212
                +D    PPGK LS  L A+L+ D+LQI E LWRF E+LG+ EPISF      L++P
Sbjct: 394  SPVIRDCC--PPGKPLSLTLPADLIGDVLQIWESLWRFSEVLGLEEPISFEELEEELLDP 451

Query: 2211 WSDGSKYLEKIEKEIQDTKIFSRGNDDTIIRSLSAKGESTAAGPGENITSFITVETGSAK 2032
              DG   LE  E   Q  +   R +D T   +LS    S +   G+N  +  T+ET S +
Sbjct: 452  CFDGLNSLENKENGTQGGRDLCR-SDGTNGCNLSLCSASASGVSGKNAQALNTMETESKR 510

Query: 2031 EATQARQASRTYYKCTGVALTNVHSSLLKVLVGELQAKVAPLADPNFDAGESKSKRGRKK 1852
            EA+QAR AS  Y +  GVALT  HS+LLKVLVGEL +KVA  ADPNFDAGESKS+RGRKK
Sbjct: 511  EASQARLASHNYGRFIGVALTKAHSALLKVLVGELLSKVAAFADPNFDAGESKSRRGRKK 570

Query: 1851 DVDSSFLLKTSKIEMLPVNELTWPELARRYVLAVLSMDSNFDSSETSNQEGGKVFRCLQG 1672
            D D+   +K  K++ LP+NELTWPELARRY+L + S++  FD +E +++EG KVFRCLQG
Sbjct: 571  DADNLIPVKKMKVDKLPINELTWPELARRYILTISSLEGKFDCAEINSREGWKVFRCLQG 630

Query: 1671 DGGVLCGALTGVAGMEADALLLAEATKQICGSLKRENDVWPIVEETDTEAIDTCETAGGD 1492
            DGG LCG+LTGVAGMEADALLLAEAT +I GS+K +ND+  I +   ++A+   +TA  +
Sbjct: 631  DGGTLCGSLTGVAGMEADALLLAEATIKIFGSVKSKNDILRI-DCIKSDAVGAYKTAELN 689

Query: 1491 GSSMPEWALPLEPVRKLPTNVGTRIRKCVYEALDKDPPEWARKILEHSISKQVYKGNASG 1312
               +P+WA  LEPVRKLPTNVG RIRKCVY+ALD DPPEWA+KIL+HSISK+VYKGNASG
Sbjct: 690  DGEIPKWAQVLEPVRKLPTNVGARIRKCVYDALDNDPPEWAKKILKHSISKEVYKGNASG 749

Query: 1311 PTKKAVVSVLADARTKCVERKPEKQKKEKGFITVSDIITKQCRSVLRRAAAADESRTFCN 1132
            PTKKAV+++LAD  +  V+R+P+K++K K   + SD+I KQCR+VLRR A+ D+ + FCN
Sbjct: 750  PTKKAVIALLADVHSGNVQRRPDKKRKGKRVRSASDLIMKQCRTVLRRVASTDKEKVFCN 809

Query: 1131 LLGTTSLHPNDNEDEGFLGSPAMVSRPLDFRTIDLRLAVGYYGGSHEAFQEDVHEVWHNI 952
            LLG   + PNDN+D+G LG PAMVSRPLDFRTIDLRLAVG YGGS+EAF EDV EVWHNI
Sbjct: 810  LLGRI-MDPNDNDDKGLLGFPAMVSRPLDFRTIDLRLAVGAYGGSNEAFLEDVQEVWHNI 868

Query: 951  RIAYGDRPELMQLAETLSQNFESLYEKEVLTLVQKCREQANPESSSLEAKKELIETLNGA 772
             IAY D  ++  LAE LS++FESLY KEVLTLVQK    AN E  + EAKKEL +T+  A
Sbjct: 869  CIAYRDSDDI-SLAEALSKDFESLYSKEVLTLVQKFMSYANVEFLNAEAKKELEDTIACA 927

Query: 771  NGIPKAPWDEGVCKVCGIDKDDESVLLCDTCDSEYHTYCLVPPLARIPEGNWYCPSCVAS 592
            + IPKAPWDEG+CKVCG+DKDD++VLLCD CDSEYHTYCL PPLARIPEGNWYCPSCVA+
Sbjct: 928  DEIPKAPWDEGLCKVCGVDKDDDNVLLCDACDSEYHTYCLNPPLARIPEGNWYCPSCVAA 987

Query: 591  KCKAQHASKRPKASGRRRQRRYQGENSRAFSEALSRLAITMGEKEYWEFNVEERIFLLKF 412
            +  +Q  S+  +   R R++RYQGE +R + E L+ LA  M  KEY E ++EER+FLLKF
Sbjct: 988  QRLSQGTSRSAEVFSRCRRKRYQGEFTRTYLETLTHLATIMEIKEYCELSIEERVFLLKF 1047

Query: 411  LCDEVLNSVIIRDHLDQCADMSSDLQQKLRSLSGDLRNLKFREENLASRSMKDNIITFNG 232
             C+EVLNS IIR+HL+QCA +S+DLQQKLR+LS + RNLK REE LA +  K N +  +G
Sbjct: 1048 FCEEVLNSAIIREHLEQCASLSADLQQKLRTLSLERRNLKLREEILAVKVEKANSVGLDG 1107

Query: 231  VLDAGR---DKPATVLT-NHGRCIGQQQTFNNKCNGYVPPTGHLPET 103
             L+        P+ +++   G+   +Q  F NK    VP   H   T
Sbjct: 1108 PLNKSNYFASFPSNLVSLEDGQQENEQNDF-NKPPYCVPHENHFSST 1153


>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score = 1014 bits (2623), Expect = 0.0
 Identities = 573/1225 (46%), Positives = 761/1225 (62%), Gaps = 27/1225 (2%)
 Frame = -2

Query: 3762 YSNLWNASNGYDM--GSGMMTHPINLGCEGIMSNSLTMSRSFEEGDMSSQHGGTRRSSNA 3589
            YSN   A NG+     SG++TH + LG E I+ ++                         
Sbjct: 176  YSNFRCAGNGFGFPKASGILTHAVKLGLEDILHHTN------------------------ 211

Query: 3588 NTKLRKKELARMSRANCSKEKLEVYRSSRAGEFPEVVMEPAFGDNARSAEAGADGNGGSL 3409
                R +   R  +++  K+ +E +R                    +  EA  + NGG+ 
Sbjct: 212  ----RTRCYFRPLKSSFRKD-MEYWRKVGV---------------VKVTEAAPEENGGTG 251

Query: 3408 SQQLNDMVPVQYEDFFVLQLGKIDMRPSYHIRTQIWPVGYQSSWHDKFTGSIFTCVVLDG 3229
             QQ N+ +PVQ+EDFFVL LG++D+RPSYH   Q+WPVGY+S WHDK TGS+F C V DG
Sbjct: 252  LQQHNNGLPVQFEDFFVLSLGEVDVRPSYHDVNQLWPVGYKSCWHDKLTGSLFMCDVSDG 311

Query: 3228 GDNGPVFKVRRYPCSTALISSGSTILFTTT-GRLEAYNKVESDAVSTSNIGREEDDTVQM 3052
            GD+GP+FKV+R  CS   + +GST+L     G+    +K +S+ + + ++  +ED ++Q 
Sbjct: 312  GDSGPIFKVKRCACSAIPLPNGSTVLCRPNLGQSNGQDKEKSNDMISLSMDYDEDGSLQT 371

Query: 3051 YLSDPDPRGQ-DLLSCLGSDKNEA---YNWDGMPXXXXXXXXXXXXXLPENIGSRDEIGE 2884
             L+DP P  + D+LSC+ S  N +      + +              L ++   +DEIGE
Sbjct: 372  LLADPSPPMENDILSCIRSSSNGSCCVQTLNSLLLEDNSLHESSGEFLSDHSRLKDEIGE 431

Query: 2883 YCVEGRSTSMVWAEVTEKLVGACCEVFNKSGSLQLYCKH-ELGRRDS--GSMNNNSEGML 2713
            + ++GRS+S VW  V++K + ACCE + ++GSL+ +C+H +LG        M+ +S+G  
Sbjct: 432  FSLQGRSSSSVWNLVSQKFIDACCETYKRTGSLRFFCEHVKLGASTLPWDIMDESSKGSY 491

Query: 2712 GALTKFCSMSGPVNIPHVIQNVNELDTSCKALSKWLEQDRFGLDVEFVQELIVQLPGSHS 2533
             +L KFCS  G V +P VIQ  NEL T C+ L+KWL+QDRFGLDVEFVQE++ QLPG  +
Sbjct: 492  TSLDKFCSSPGSVCMPSVIQGENELQTQCEVLAKWLDQDRFGLDVEFVQEMLEQLPGVCA 551

Query: 2532 CSAYEFPYKKKNHS---------ILQKRKSGIHGEDVLAFDNLLKDYKRPRRQGSLQTHE 2380
            CS Y+    +  HS         +L + ++G+  +   A D L    KR R+  ++    
Sbjct: 552  CSQYKLLNNRSYHSTLLTVGNGLLLAETENGVQSKGEEALDCLFGGSKRARKY-TVGDPL 610

Query: 2379 KDVQFPPPGKSLSAKLSAELVSDILQICEFLWRFYEILGMSEPISFXXXXXXLVNPWSDG 2200
             D   PPPG  L ++L  +LV D++Q+ E LWRFYEILG+ EP S       L+ PWSD 
Sbjct: 611  MDDFCPPPGNPLGSRLPPDLVGDVIQVWESLWRFYEILGLKEPFSIEELEEELICPWSDD 670

Query: 2199 SKYLEKIEKEIQDTKIFSRGNDDTIIRSLSAKGE----STAAGPGE---NITSFITVETG 2041
               LEK   E Q+ +      D T  R   A G     ST +GP     N  +FI +ETG
Sbjct: 671  LNLLEKFGTETQENR------DITPTRPSGASGHIPSSSTDSGPEVSTGNPHAFIQMETG 724

Query: 2040 SAKEATQARQASRTYYKCTGVALTNVHSSLLKVLVGELQAKVAPLADPNFDAGESKSKRG 1861
              KEA QA+ AS TY +C+GV LT  H+SLLKVLV ELQ KVA L DPNFD+GESKS+RG
Sbjct: 725  QKKEAAQAKLASVTYSRCSGVTLTKAHNSLLKVLVSELQFKVAALVDPNFDSGESKSRRG 784

Query: 1860 RKKDVDSSFLLKTSKIEMLPVNELTWPELARRYVLAVLSMDSNFDSSETSNQEGGKVFRC 1681
            RKKD D++   K +K+ MLP+NELTWPELARRY+L VLSMD N DS+E + +E GKVFRC
Sbjct: 785  RKKDADNAIPTKKTKLNMLPINELTWPELARRYILCVLSMDGNLDSAEITIRESGKVFRC 844

Query: 1680 LQGDGGVLCGALTGVAGMEADALLLAEATKQICGSLKRENDVWPIVEETDTEAIDTCETA 1501
            LQGDGGVLC +LTGVAGM+ADALL AEA KQI GSL RE+D+  I E+      D     
Sbjct: 845  LQGDGGVLCDSLTGVAGMQADALLFAEARKQIFGSLNREDDILTIEEKGSDATGDHDRIV 904

Query: 1500 GGDGSSMPEWALPLEPVRKLPTNVGTRIRKCVYEALDKDPPEWARKILEHSISKQVYKGN 1321
              DG+ +PEWA  LEPVRKLPTNVGTRIRKC+YEAL+KDPPEWA+KIL HSISK+VYKGN
Sbjct: 905  VNDGN-IPEWAQVLEPVRKLPTNVGTRIRKCIYEALEKDPPEWAKKILAHSISKEVYKGN 963

Query: 1320 ASGPTKKAVVSVLADARTKCVERKPEKQKKEKGFITVSDIITKQCRSVLRRAAAADESRT 1141
            ASGPTKKAV+SVL     + ++ KP+K++K K  I++ DII KQCR  LRR AAAD+++ 
Sbjct: 964  ASGPTKKAVLSVLGIVHDEGLKSKPDKERKRKRVISIPDIIMKQCRITLRRGAAADDAKV 1023

Query: 1140 FCNLLGTTSLHPNDNEDEGFLGSPAMVSRPLDFRTIDLRLAVGYYGGSHEAFQEDVHEVW 961
            FC LLG+  ++  DN+DEG LG+PAMVSRPLDFRTIDLRLAVG YGGS E F EDV E+W
Sbjct: 1024 FCTLLGSKLINSIDNDDEGLLGTPAMVSRPLDFRTIDLRLAVGAYGGSWETFLEDVRELW 1083

Query: 960  HNIRIAYGDRPELMQLAETLSQNFESLYEKEVLTLVQKCREQANPESSSLEAKKELIETL 781
            +NI  AY D+P+ ++LA TLSQNFES++EKEVL LVQK  E A  E  S E +KE+ + L
Sbjct: 1084 NNIHTAYADQPDSVELARTLSQNFESMFEKEVLPLVQKFTEYAKSECLSAETEKEIDDFL 1143

Query: 780  NGANGIPKAPWDEGVCKVCGIDKDDESVLLCDTCDSEYHTYCLVPPLARIPEGNWYCPSC 601
              A+ IPKAPWDEGVCKVCGIDKDD+S                                 
Sbjct: 1144 VSASEIPKAPWDEGVCKVCGIDKDDDS--------------------------------- 1170

Query: 600  VASKCKAQHASKRPKASGRRRQRRYQGENSRAFSEALSRLAITMGEKEYWEFNVEERIFL 421
                               R+ +  QG+ + A+ E+L+ LA  M EKEYWE +V++R FL
Sbjct: 1171 -------------------RQGKNCQGDFTHAYLESLAHLAAAMEEKEYWELSVDQRTFL 1211

Query: 420  LKFLCDEVLNSVIIRDHLDQCADMSSDLQQKLRSLSGDLRNLKFREENLASRSMKDNIIT 241
             KFLCDE+LN+ +IR HL+QCA+ S++LQQKLRS+S + +NLK +EENLA+R+ K +   
Sbjct: 1212 FKFLCDELLNTALIRQHLEQCAESSAELQQKLRSISVEWKNLKLKEENLAARAPKVDSGM 1271

Query: 240  FNGVLDAGRDKP-ATVLTNHGRCIG 169
                 + G +   ++ LTN+G+  G
Sbjct: 1272 IYVAGEVGTEGGLSSALTNNGKLEG 1296


>ref|XP_002525350.1| DNA binding protein, putative [Ricinus communis]
            gi|223535313|gb|EEF36988.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 1794

 Score = 1014 bits (2623), Expect = 0.0
 Identities = 565/1146 (49%), Positives = 723/1146 (63%), Gaps = 22/1146 (1%)
 Frame = -2

Query: 3459 DNARSAEAGADGNGGSLSQQLNDMVPVQYEDFFVLQLGKIDMRPSYHIRTQIWPVGYQSS 3280
            D  RS   G        S    D  PVQ+EDF+VL  G+ID RPSYH  +QIWPVGY+SS
Sbjct: 40   DPRRSVFIGRQWAASDYSANTTDGFPVQFEDFYVLSAGEIDPRPSYHCTSQIWPVGYKSS 99

Query: 3279 WHDKFTGSIFTCVVLDGGDNGPVFKVRRYPCSTALISSGSTILFTTTGRLEAYNKVESDA 3100
            WHDK TGS+F C + DGGD GP+FKV+RYPCST     GSTILF        +      +
Sbjct: 100  WHDKITGSLFVCDISDGGDCGPIFKVQRYPCSTTPFPIGSTILFRP-----GFGTDNKKS 154

Query: 3099 VSTSNIGREEDDTVQMYLSDPDPRGQD--LLSCLGSDKNEAYN---WDGMPXXXXXXXXX 2935
             STS+    ED  VQM LSD  P   D  L + +G+  +E  N    DG+          
Sbjct: 155  DSTSHTDNNEDIDVQMILSDHSPPHLDFKLSTDVGTSFDEISNSQPTDGLGKNLNSISRN 214

Query: 2934 XXXXLPENIGSRDEIGEYCVEGRSTSMVWAEVTEKLVGACCEVFNKSGSLQLYCKHELGR 2755
                   N    D+IGE+ VEGRS+S VW  V+EKLV +C EV+ + G  +  C+H    
Sbjct: 215  LGKFSSANRRIGDDIGEFLVEGRSSSSVWRMVSEKLVHSCREVYKQIGICKFCCRHAFEC 274

Query: 2754 RDSGSMNNNSEGMLG--ALTKFCSMSGPVNIPHVIQNVNELDTSCKALSKWLEQDRFGLD 2581
              S  ++   E  +   +L KFC +SGP N+ H +++ ++L  SC+AL +WL QDRFGLD
Sbjct: 275  WSSCLIHETLEANISPDSLAKFCHLSGPFNVLHHVESNDDLANSCEALVEWLGQDRFGLD 334

Query: 2580 VEFVQELIVQLPGSHSCSAYEFPYKKKNHSILQ---------KRKSGIHGEDVLAFDNLL 2428
            ++FVQE+I QLPG  SCS Y F  K+ N S LQ         KRK   HGE      N+L
Sbjct: 335  IDFVQEIIEQLPGVQSCSDYTFLDKRSNQSKLQTVQNGYLLVKRKEEAHGEKETY--NML 392

Query: 2427 KDYKRPRRQGSLQTHEKDVQFPPPGKSLSAKLSAELVSDILQICEFLWRFYEILGMSEPI 2248
            K  + P++Q     H  D    PPGK LS+KL   LV D+LQ  E LWRF E+LG+  P+
Sbjct: 393  KGCRNPKKQ-----HLNDSC--PPGKPLSSKLPTVLVGDVLQSWELLWRFSEVLGLDRPL 445

Query: 2247 SFXXXXXXLVNPWSDGSKYLEKIEKEIQDTKIFSRGNDDTIIRSLSAKGESTAAGPGENI 2068
            SF                  +++E+E+ D   F+  N             S ++G  +++
Sbjct: 446  SF------------------KELEEELTDCNSFTLMNSPV----------SKSSGNSQHV 477

Query: 2067 TSFITVETGSAKEATQARQASRTYYKCTGVALTNVHSSLLKVLVGELQAKVAPLADPNFD 1888
             +    ET   +E  + RQA  T   C G  L   H SLLK+L+ EL++K+A   DP+ +
Sbjct: 478  LTADDNET--PEECAEVRQAPDTLCCCAGETLYKAHCSLLKILLEELESKLAVFVDPSLE 535

Query: 1887 AGESKSKRGRKKDVDSSFLLKTSKIEMLPVNELTWPELARRYVLAVLSMDSNFDSSETSN 1708
            +GES+S++ RKK+ DS    +   +++LP+NELTWPELARRY+L V SM+ N DS+E  N
Sbjct: 536  SGESRSRKRRKKEADSLIYARKLMLDLLPINELTWPELARRYLLTVSSMEGNLDSAEVMN 595

Query: 1707 QEGGKVFRCLQGDGGVLCGALTGVAGMEADALLLAEATKQICGSLKRENDVWPIVEETDT 1528
            +E  KVF CLQGD G L G+L GVA MEADALLLAEA KQI G+ K  N     V+ +D+
Sbjct: 596  RESCKVFHCLQGDSGALYGSLPGVALMEADALLLAEAIKQIFGTSKNVNSNLN-VDSSDS 654

Query: 1527 EAIDTCETAGGDGSSMPEWALPLEPVRKLPTNVGTRIRKCVYEALDKDPPEWARKILEHS 1348
             A  + +        +PEWA  LEPVRKLPTNVG RIR+C+Y AL+ +PPEWA KIL+HS
Sbjct: 655  VAPSSSKEVKLKDGEVPEWAKVLEPVRKLPTNVGARIRRCIYNALELNPPEWATKILKHS 714

Query: 1347 ISKQVYKGNASGPTKKAVVSVLADARTKCVERKPEKQKKEKGFITVSDIITKQCRSVLRR 1168
            IS++VYKGNASGPTKKAV+SVLAD   +  ++KP +++K K   T+ D+I KQCR VLRR
Sbjct: 715  ISREVYKGNASGPTKKAVLSVLADVCGETPQQKPNRKRKGKHIDTLPDVIMKQCRKVLRR 774

Query: 1167 AAAADESRTFCNLLGTTSLHPNDNEDEGFLGSPAMVSRPLDFRTIDLRLAVGYYGGSHEA 988
            AAAADE + FCNLLG T L+ +DN+DEG LG P MVSRPLDFRTIDLRLA G YGGSHEA
Sbjct: 775  AAAADEEKIFCNLLGRTLLNTSDNDDEGLLGFPTMVSRPLDFRTIDLRLAFGAYGGSHEA 834

Query: 987  FQEDVHEVWHNIRIAYGDRPELMQLAETLSQNFESLYEKEVLTLVQKCREQANPESSSLE 808
            F EDV EVWH+IR AY D+ +L+ LAE LSQNFE+LY+ EVLTLVQK  + A  E S+ E
Sbjct: 835  FLEDVREVWHHIRTAYADQSDLVHLAEKLSQNFEALYKNEVLTLVQKLTDYAAVECSNSE 894

Query: 807  AKKELIETLNGANGIPKAPWDEGVCKVCGIDKDDESVLLCDTCDSEYHTYCLVPPLARIP 628
            AKKE+ + L  A+ +PKAPWDEGVCKVCG+DKDD++VLLCD CDS YHTYCL PPLARIP
Sbjct: 895  AKKEMEDILEHASQMPKAPWDEGVCKVCGVDKDDDNVLLCDKCDSGYHTYCLNPPLARIP 954

Query: 627  EGNWYCPSCVASKCKAQHASKRPKASGRRRQRRYQGENSRAFSEALSRLAITMGEKEYWE 448
            EGNWYCPSC+      Q AS+ P+     R++R QGE +    EAL+ L  TM   +YW+
Sbjct: 955  EGNWYCPSCI-----TQGASQVPQFVSHCRKKRRQGEFTHGVLEALAHLGTTMEITDYWD 1009

Query: 447  FNVEERIFLLKFLCDEVLNSVIIRDHLDQCADMSSDLQQKLRSLSGDLRNLKFREENLAS 268
            ++VEERIFLLKFL DEVLNS  IR+HLDQCA +S+DLQQKLRSLS + RNLKF+EE    
Sbjct: 1010 YSVEERIFLLKFLGDEVLNSANIREHLDQCASVSADLQQKLRSLSMEWRNLKFKEE---- 1065

Query: 267  RSMKDNIITFNGVLDAGRDKPATVLTNHGRCIGQQQTFNNKCNGYVPPTGHL------PE 106
                   +  NGV  +G++   TVL N+ + +GQ  + ++ C+       HL      P 
Sbjct: 1066 -------LMLNGVGKSGKEGTTTVLPNYDKLLGQTHSRSSLCSTSFIDLEHLKDGPRFPR 1118

Query: 105  TQDVTE 88
            T D T+
Sbjct: 1119 TNDFTK 1124


>ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyrata subsp. lyrata]
            gi|297330119|gb|EFH60538.1| methyl-CpG-binding domain 9
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2183

 Score =  966 bits (2497), Expect = 0.0
 Identities = 529/1096 (48%), Positives = 715/1096 (65%), Gaps = 17/1096 (1%)
 Frame = -2

Query: 3492 FPEVVMEPAFGDNARSAEAGADGNGGSLSQQLNDMVPVQYEDFFVLQLGKIDMRPSYHIR 3313
            FP VV     G + ++ ++   GN G   ++ N+ +P+QYEDFFVL LG+ID+R SYH  
Sbjct: 372  FPFVVKS---GTHLQAGDSLNSGNNGCGCEEANNGLPMQYEDFFVLSLGRIDIRQSYHNV 428

Query: 3312 TQIWPVGYQSSWHDKFTGSIFTCVVLDGGDNGPVFKVRRYPCSTALISSGSTILFTTTGR 3133
              I+P+GY+S WHDK TGS+FTC V DG  +GPVFKV R PCS + I  GST+   +  +
Sbjct: 429  NVIYPIGYKSCWHDKITGSLFTCEVSDG-TSGPVFKVTRSPCSKSFIPVGSTVF--SCPK 485

Query: 3132 LEAYNKVESDAVST---SNIGREEDDTVQMYLSDPDPR-GQDLLSCLGSDKNEAYNWDGM 2965
            ++   +   D  S    S +  ++D  ++  LSD  P  G D+LSCL  +KN +  ++ +
Sbjct: 486  IDEMVEQNIDKQSDRRDSTLEHDDDANIETLLSDHSPPLGDDILSCL-REKNFSKTFNCL 544

Query: 2964 PXXXXXXXXXXXXXLPENIGSRDEIGEYCVEGRSTSMVWAEVTEKLVGACCEVFNKSGSL 2785
                          L  N     EIGE  VE  S S  W +V++KLV AC  V  + G+ 
Sbjct: 545  RSEVGSSQVESDKVLSYNQDRGVEIGEIVVEEDSLSAAWNKVSQKLVDACSIVMKQKGTF 604

Query: 2784 QLYCKHELGRRDSGSMN----NNSEGMLGALTKFCSMSGPVNIPHVIQNVNELDTSCKAL 2617
               CKH    R++  +N    N  + +  +L++FC   GP ++    ++ +E+ T   AL
Sbjct: 605  NFLCKHV--DRETREINWDTMNEKDNVFLSLSRFCCTLGPHSVTCGEKDKSEIATLVDAL 662

Query: 2616 SKWLEQDRFGLDVEFVQELIVQLPGSHSCSAYEFPYKKKNHSI---------LQKRKSGI 2464
            S+WL+Q+RFGLD +FVQE+I  +PG+ SC+ Y     + + S+         + K K G 
Sbjct: 663  SRWLDQNRFGLDADFVQEMIEHMPGAESCTNYRTLKSRSSSSVPVTVAEGALVVKPKGGE 722

Query: 2463 HGEDVLAFDNLLKDYKRPRRQGSLQTHEKDVQFPPPGKSLSAKLSAELVSDILQICEFLW 2284
            + ++ + F  + +  K+P+  G           PPPG+ +  +L   LV D LQ+ E  W
Sbjct: 723  NVKEEV-FGEISRKSKKPKLNGDFGVRNLH---PPPGRPMCLRLPPGLVGDFLQVSEVFW 778

Query: 2283 RFYEILGMSEPISFXXXXXXLVNPWSDGSKYLEKIEKEIQDTKIFSRGNDDTIIRSLSAK 2104
            RF+EILG  E  S       L+NP  DG  +L+K  K+ + +++     D +     S  
Sbjct: 779  RFHEILGFEEAFSSEKLEQELINPVFDGL-FLDKPGKDDKRSEMNFTNKDCSGTEFFSLF 837

Query: 2103 GESTAAGPGENITSFITVETGSAKEATQARQASRTYYKCTGVALTNVHSSLLKVLVGELQ 1924
             ES    P +N ++ +  ET  A++++    +  ++  C G  LT  H SLL+VL+ ELQ
Sbjct: 838  DESRQPFPAKNTSASVLKET-KAEDSSDFAISYSSHGPCVGALLTRTHISLLQVLICELQ 896

Query: 1923 AKVAPLADPNFDAGESKSKRGRKKDVDSSFLLKTSKIEMLPVNELTWPELARRYVLAVLS 1744
            +KVA   DPNFD+GES+S+RGRKKD DS+   K +K+ MLPVNE TWPELARRY+L++LS
Sbjct: 897  SKVAAFVDPNFDSGESRSRRGRKKD-DSTLSAKRNKLHMLPVNEFTWPELARRYILSLLS 955

Query: 1743 MDSNFDSSETSNQEGGKVFRCLQGDGGVLCGALTGVAGMEADALLLAEATKQICGSLKRE 1564
            MD N +S+E S +E GKVFRCLQGDGG+LCG+LTGVAGMEAD++LLAEA K+I GSL  E
Sbjct: 956  MDGNLESAEISARESGKVFRCLQGDGGLLCGSLTGVAGMEADSMLLAEAIKKISGSLTSE 1015

Query: 1563 NDVWPIVEETDTEAIDTCETAGGDGSSMPEWALPLEPVRKLPTNVGTRIRKCVYEALDKD 1384
            +DV   VE+ D++ +D  ET   +G  +PEWA  LEPV+KLPTNVGTRIRKCVYEAL+++
Sbjct: 1016 HDVLS-VEDDDSDGLDATETNTCNGD-IPEWAQVLEPVKKLPTNVGTRIRKCVYEALERN 1073

Query: 1383 PPEWARKILEHSISKQVYKGNASGPTKKAVVSVLADARTKCVERKPEKQKKEKGFITVSD 1204
            PPEWA+KILEHSISK+VYKGNASGPTKKAV+S+LAD R   + ++  K  K++  I VSD
Sbjct: 1074 PPEWAKKILEHSISKEVYKGNASGPTKKAVLSLLADVRGGDLVQRSVKGTKKRTSIGVSD 1133

Query: 1203 IITKQCRSVLRRAAAADESRTFCNLLGTTSLHPNDNEDEGFLGSPAMVSRPLDFRTIDLR 1024
            +I K+CR+VLR  AAADE + FC LLG   L+ +DN+D+G LG+PAMVSRPLDFRTIDLR
Sbjct: 1134 VIMKKCRAVLRGVAAADEDKVFCTLLGRKLLNSSDNDDDGLLGTPAMVSRPLDFRTIDLR 1193

Query: 1023 LAVGYYGGSHEAFQEDVHEVWHNIRIAYGDRPELMQLAETLSQNFESLYEKEVLTLVQKC 844
            LA G Y GS EAF EDV E+W +IR+ Y D+P+ ++L  TLS+ F+SLYE EVL LVQK 
Sbjct: 1194 LAAGAYDGSTEAFLEDVLELWSSIRVMYADQPDYVELVATLSEKFKSLYEAEVLPLVQKL 1253

Query: 843  REQANPESSSLEAKKELIETLNGANGIPKAPWDEGVCKVCGIDKDDESVLLCDTCDSEYH 664
             E    E  S E KKE+ + +   N +PKAPWDEGVCKVCG+DKDD+SVLLCDTCD+EYH
Sbjct: 1254 MEYRKLECLSAEMKKEIKDIVVSVNKLPKAPWDEGVCKVCGVDKDDDSVLLCDTCDAEYH 1313

Query: 663  TYCLVPPLARIPEGNWYCPSCVASKCKAQHASKRPKASGRRRQRRYQGENSRAFSEALSR 484
            TYCL PPL RIPEGNWYCPSCV +K  AQ A +  K   RR+ R+YQG+ +R   E  + 
Sbjct: 1314 TYCLNPPLIRIPEGNWYCPSCVIAKRMAQEALESYKLVRRRKGRKYQGQLTRTSMEMTAH 1373

Query: 483  LAITMGEKEYWEFNVEERIFLLKFLCDEVLNSVIIRDHLDQCADMSSDLQQKLRSLSGDL 304
            LA  M EK+YWEF+ EERI LLK LCDE+L+S ++  HL+QCA+   ++QQKLRSLS + 
Sbjct: 1374 LADVMEEKDYWEFSAEERILLLKLLCDELLSSSLVHQHLEQCAEAIIEMQQKLRSLSSEW 1433

Query: 303  RNLKFREENLASRSMK 256
            +N K R+E L ++  K
Sbjct: 1434 KNAKMRQEFLTAKLAK 1449