BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018363
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...   489   e-136
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   484   e-134
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]         477   e-132
ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   474   e-131
ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   474   e-131

>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
           gi|297739063|emb|CBI28552.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score =  489 bits (1259), Expect = e-136
 Identities = 229/281 (81%), Positives = 251/281 (89%), Gaps = 6/281 (2%)
 Frame = +3

Query: 33  TTPQNPAFNSFHRKTKYYKPVSDGVISTDGDRSVVIGESGVSYLLPGAPFEFQYSYSETP 212
           T P  PAF + H ++KYYKPVSDGVI++DGDRSVVIGESGVSYLLPGAPFEFQ+SYSETP
Sbjct: 55  TKPPTPAFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVSYLLPGAPFEFQFSYSETP 114

Query: 213 KVKPLAIREPAFLPFSPPTMPRPWTGKAPLKKSKKNIQLFDSFN------NGVKRVEMAT 374
           K KPLAIREPAFLPF+PPTMPRPWTGKAPLKKSKK I LFDSFN       GVKRVEM  
Sbjct: 115 KAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPG 174

Query: 375 TFPLGNLTKDGKTREEILGVPLTKPEVRMLIKPHLSHNRQVNLGRDGLTHNMLELIHSHW 554
            FPLG    +G+TREEILG PL+K E+RML+KP+LSHNRQVNLGRDGLTHNMLELIHSHW
Sbjct: 175 PFPLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHW 234

Query: 555 KRDEVCKIKCKGVPTVDMDNVCHHVEEKTGGKIIHRVGGVLYLFRGRNYNYRNRPQYPVM 734
           KR  VCK++CKGVPT+DMDNVCHH+EEKTGGKIIHRVGGV+YLFRGRNYNYR RPQYPVM
Sbjct: 235 KRQRVCKVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVM 294

Query: 735 LWKPATPVYPKLIQEAPEGLTKFEADNLRMKGESLLPICKL 857
           LWKPA PVYPKLIQEAPEGLTKFEAD LRMKG++L+PIC+L
Sbjct: 295 LWKPAAPVYPKLIQEAPEGLTKFEADELRMKGKNLIPICRL 335


>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
           chloroplastic-like [Vitis vinifera]
          Length = 560

 Score =  484 bits (1246), Expect = e-134
 Identities = 231/291 (79%), Positives = 251/291 (86%), Gaps = 6/291 (2%)
 Frame = +3

Query: 3   KYPHKPLIKKTTPQNPAFNSFHRKTKYYKPVSDGVISTDGDRSVVIGESGVSYLLPGAPF 182
           K P  P    T P  PAF + H ++KYYKPVSDGVI++DGDRSVVIGESGVSYLL GAPF
Sbjct: 49  KSPRPP----TKPSTPAFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVSYLLAGAPF 104

Query: 183 EFQYSYSETPKVKPLAIREPAFLPFSPPTMPRPWTGKAPLKKSKKNIQLFDSFN------ 344
           EFQ+SYSETPK KPLAIREPAFLPF+PPTMPRPWTGKAPLKKSKK I LFDSFN      
Sbjct: 105 EFQFSYSETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGT 164

Query: 345 NGVKRVEMATTFPLGNLTKDGKTREEILGVPLTKPEVRMLIKPHLSHNRQVNLGRDGLTH 524
            GVKRVEM   FPLG    +G+TREEILG PL+K E+RML+KP+LSHNRQVNLGRDGLTH
Sbjct: 165 KGVKRVEMPGPFPLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTH 224

Query: 525 NMLELIHSHWKRDEVCKIKCKGVPTVDMDNVCHHVEEKTGGKIIHRVGGVLYLFRGRNYN 704
           NMLELIHSHWKR  VCK+ CKGVPT+DMDNVCHH+EEKTGGKIIHRVGGV+YLFRGRNYN
Sbjct: 225 NMLELIHSHWKRQRVCKVWCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYN 284

Query: 705 YRNRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEADNLRMKGESLLPICKL 857
           YR RPQYPVMLWKPA PVYPKLIQEAPEGLTKFEAD LRMKG +L+PIC+L
Sbjct: 285 YRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKFEADELRMKGXNLIPICRL 335


>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
          Length = 603

 Score =  477 bits (1228), Expect = e-132
 Identities = 223/277 (80%), Positives = 247/277 (89%), Gaps = 6/277 (2%)
 Frame = +3

Query: 45  NPAFNSFHRKTKYYKPVSDGVISTDGDRSVVIGESGVSYLLPGAPFEFQYSYSETPKVKP 224
           NPA  +FHR++KYYKPV DGVIS++G+R+VVIG+SGVSYLLPGAPFEFQYSYSETP VKP
Sbjct: 105 NPALKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKP 164

Query: 225 LAIREPAFLPFSPPTMPRPWTGKAPLKKSKKNIQLFDSFN------NGVKRVEMATTFPL 386
           +AIREPAFLPF+PPTMPRPWTGKAPLK SKK I LFDSFN       GVK+V++   FPL
Sbjct: 165 IAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPL 224

Query: 387 GNLTKDGKTREEILGVPLTKPEVRMLIKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRDE 566
           G   K+GK+REEILG PL   E+RML+KPHLSHNRQVNLGRDGLTHNMLELIHSHWKR  
Sbjct: 225 GQYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQR 284

Query: 567 VCKIKCKGVPTVDMDNVCHHVEEKTGGKIIHRVGGVLYLFRGRNYNYRNRPQYPVMLWKP 746
           VCK++CKGVPTVDMDN+CHH+EEKTGGKIIHRVGGVLYLFRGRNYNYR RPQYPVMLWKP
Sbjct: 285 VCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKP 344

Query: 747 ATPVYPKLIQEAPEGLTKFEADNLRMKGESLLPICKL 857
           A PVYPKLIQEAPEGLTK EA+ LRMKG++LLPICKL
Sbjct: 345 AAPVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKL 381


>ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
           chloroplastic-like [Cucumis sativus]
          Length = 603

 Score =  474 bits (1219), Expect = e-131
 Identities = 223/279 (79%), Positives = 246/279 (88%), Gaps = 6/279 (2%)
 Frame = +3

Query: 39  PQNPAFNSFHRKTKYYKPVSDGVISTDGDRSVVIGESGVSYLLPGAPFEFQYSYSETPKV 218
           P NPA  +FH ++KYYKPV DGVIS++G+R+VVIG+SGVSY LPGAPFEFQYSYSETPKV
Sbjct: 103 PPNPALKTFHHRSKYYKPVKDGVISSNGERAVVIGDSGVSYHLPGAPFEFQYSYSETPKV 162

Query: 219 KPLAIREPAFLPFSPPTMPRPWTGKAPLKKSKKNIQLFDSFN------NGVKRVEMATTF 380
           KP+AIREPAFLPF+PPTMPRPWTGKAPLK SKK I LFDSFN       GVK V++   F
Sbjct: 163 KPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKLVQLPGPF 222

Query: 381 PLGNLTKDGKTREEILGVPLTKPEVRMLIKPHLSHNRQVNLGRDGLTHNMLELIHSHWKR 560
           PLG   K+GK+REEILG PL   E+RML+KPHLSHNRQVNLGRDGLTHNMLELIHSHWKR
Sbjct: 223 PLGQHPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKR 282

Query: 561 DEVCKIKCKGVPTVDMDNVCHHVEEKTGGKIIHRVGGVLYLFRGRNYNYRNRPQYPVMLW 740
             VCK++CKGVPTVDMDN+CHH+EEKTGGKIIHRVGGVLYLFRGRNYNYR RPQYPVMLW
Sbjct: 283 QRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLW 342

Query: 741 KPATPVYPKLIQEAPEGLTKFEADNLRMKGESLLPICKL 857
           KPA PVYPKLIQEAPEGLTK EA+ LRMKG++LLPICKL
Sbjct: 343 KPAAPVYPKLIQEAPEGLTKKEANVLRMKGKNLLPICKL 381


>ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
           chloroplastic-like [Cucumis sativus]
          Length = 602

 Score =  474 bits (1219), Expect = e-131
 Identities = 223/279 (79%), Positives = 246/279 (88%), Gaps = 6/279 (2%)
 Frame = +3

Query: 39  PQNPAFNSFHRKTKYYKPVSDGVISTDGDRSVVIGESGVSYLLPGAPFEFQYSYSETPKV 218
           P NPA  +FH ++KYYKPV DGVIS++G+R+VVIG+SGVSY LPGAPFEFQYSYSETPKV
Sbjct: 102 PPNPALKTFHHRSKYYKPVKDGVISSNGERAVVIGDSGVSYHLPGAPFEFQYSYSETPKV 161

Query: 219 KPLAIREPAFLPFSPPTMPRPWTGKAPLKKSKKNIQLFDSFN------NGVKRVEMATTF 380
           KP+AIREPAFLPF+PPTMPRPWTGKAPLK SKK I LFDSFN       GVK V++   F
Sbjct: 162 KPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKLVQLPGPF 221

Query: 381 PLGNLTKDGKTREEILGVPLTKPEVRMLIKPHLSHNRQVNLGRDGLTHNMLELIHSHWKR 560
           PLG   K+GK+REEILG PL   E+RML+KPHLSHNRQVNLGRDGLTHNMLELIHSHWKR
Sbjct: 222 PLGQHPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKR 281

Query: 561 DEVCKIKCKGVPTVDMDNVCHHVEEKTGGKIIHRVGGVLYLFRGRNYNYRNRPQYPVMLW 740
             VCK++CKGVPTVDMDN+CHH+EEKTGGKIIHRVGGVLYLFRGRNYNYR RPQYPVMLW
Sbjct: 282 QRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLW 341

Query: 741 KPATPVYPKLIQEAPEGLTKFEADNLRMKGESLLPICKL 857
           KPA PVYPKLIQEAPEGLTK EA+ LRMKG++LLPICKL
Sbjct: 342 KPAAPVYPKLIQEAPEGLTKKEANVLRMKGKNLLPICKL 380