BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018358
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   167   8e-40
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   157   6e-37
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   155   3e-36
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...   154   9e-36

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  167 bits (423), Expect = 8e-40
 Identities = 74/170 (43%), Positives = 118/170 (69%), Gaps = 2/170 (1%)
 Frame = -3

Query: 505  FSEGVLPMKYLGMPLITTRLTFTDCMPLITKVTKRIQGWRSIFLSYAERLQLLKAVLNNL 326
            FS G LP++YLG+PLIT RL+ TDC+PL+ +V KRI  W S FLSYA RL L+ +VL ++
Sbjct: 762  FSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSI 821

Query: 325  SVYWLSSFVLPQRAIDEINRLCN-FLWTGTDGDTSHALISWKDSCLPYSEGGLGIRCLET 149
              +WL++F LP++ I E+ ++C+ FLW+GT+ +++ A ISW   C P  EGGLG+R L+ 
Sbjct: 822  CNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKE 881

Query: 148  TNHAANIRHLWNVISKKNTLWVRWIQKNKIKGRNIWDIK-IPNDCSWSWR 2
             N    ++ +W ++S  N+LWV+W+ ++ ++  + W++K   +  SW W+
Sbjct: 882  ANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWK 931


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  166 bits (419), Expect = 2e-39
 Identities = 73/171 (42%), Positives = 115/171 (67%), Gaps = 2/171 (1%)
 Frame = -3

Query: 511 LQFSEGVLPMKYLGMPLITTRLTFTDCMPLITKVTKRIQGWRSIFLSYAERLQLLKAVLN 332
           L F EG LPMKYLG+PL+++RL    C  L+ ++T +++ W    LSYA R+QL+ +VL 
Sbjct: 47  LGFREGELPMKYLGVPLLSSRLKAIYCKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLF 106

Query: 331 NLSVYWLSSFVLPQRAIDEINRLC-NFLWTGTDGDTSHALISWKDSCLPYSEGGLGIRCL 155
           ++ VYW S F+LP + I  + ++  +FLW+G+D  T+ A ++W   CLP  EGGLGI+ +
Sbjct: 107 SIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSI 166

Query: 154 ETTNHAANIRHLWNVISKKN-TLWVRWIQKNKIKGRNIWDIKIPNDCSWSW 5
           +  N  A ++H+WN+ +  + ++W  WI+ N ++GRN W IK P +CSW+W
Sbjct: 167 KEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAW 217


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  157 bits (398), Expect = 6e-37
 Identities = 71/151 (47%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
 Frame = -3

Query: 505  FSEGVLPMKYLGMPLITTRLTFTDCMPLITKVTKRIQGWRSIFLSYAERLQLLKAVLNNL 326
            F  G LP++YLG+PL+T R+T  DC+PL+ K+  RI  W++ FLSYA RLQLL +V+++L
Sbjct: 1017 FDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSL 1076

Query: 325  SVYWLSSFVLPQRAIDEINRL-CNFLWTGTDGDTSHALISWKDSCLPYSEGGLGIRCLET 149
            + +W+S+F LP+  I EI ++   FLW+GTD +   A ++W D C P SEGGLG+R L  
Sbjct: 1077 TKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVCKPKSEGGLGLRSLVD 1136

Query: 148  TNHAANIRHLWNVISKKNTLWVRWIQKNKIK 56
             N     + +W ++S K++LWV WIQ N I+
Sbjct: 1137 ANKICCFKLIWRLVSAKHSLWVNWIQNNLIR 1167


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  155 bits (392), Expect = 3e-36
 Identities = 70/170 (41%), Positives = 113/170 (66%), Gaps = 2/170 (1%)
 Frame = -3

Query: 505  FSEGVLPMKYLGMPLITTRLTFTDCMPLITKVTKRIQGWRSIFLSYAERLQLLKAVLNNL 326
            F  G LP+KYLG+PL+T R+T +D +PL+ K+  RI  W + FLS+A RLQL+K+VL+++
Sbjct: 909  FELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSI 968

Query: 325  SVYWLSSFVLPQRAIDEINRLCN-FLWTGTDGDTSHALISWKDSCLPYSEGGLGIRCLET 149
            + +WLS F LP+  + EI ++ + FLW+G D +T  A I+W + C    EGGLG++ L+ 
Sbjct: 969  TNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKE 1028

Query: 148  TNHAANIRHLWNVISKKNTLWVRWIQKNKIKGRNIWDIKIPNDC-SWSWR 2
             N  + ++ +W ++S +++LWV+W+ K+ I+    W +K      SW WR
Sbjct: 1029 ANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWLWR 1078


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score =  154 bits (388), Expect = 9e-36
 Identities = 70/170 (41%), Positives = 112/170 (65%), Gaps = 2/170 (1%)
 Frame = -3

Query: 505 FSEGVLPMKYLGMPLITTRLTFTDCMPLITKVTKRIQGWRSIFLSYAERLQLLKAVLNNL 326
           F+ G LP++YLG+PL+T +L+ TD +PLI  + K+I  W + FLSYA RL L+ +VL ++
Sbjct: 144 FAVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSI 203

Query: 325 SVYWLSSFVLPQRAIDEINRLCN-FLWTGTDGDTSHALISWKDSCLPYSEGGLGIRCLET 149
             +W+ +F LP+  I EI+++C+ +LW+G D +TS A I+W D C P  EGGLG+R L+ 
Sbjct: 204 CNFWMGAFRLPRECIREIDKMCSAYLWSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKE 263

Query: 148 TNHAANIRHLWNVISKKNTLWVRWIQKNKIKGRNIWDIKIPNDC-SWSWR 2
            N  + ++ +W +IS  ++LWV+WI    +K  + W ++      SW W+
Sbjct: 264 ANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAVRENTSLGSWMWK 313