BLASTX nr result

ID: Coptis23_contig00018344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018344
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32503.3| unnamed protein product [Vitis vinifera]              101   2e-19
ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio...   100   4e-19
emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]   100   4e-19
ref|XP_003541121.1| PREDICTED: B3 domain-containing transcriptio...    96   1e-17
ref|XP_003606842.1| B3 domain-containing transcription factor VR...    94   5e-17

>emb|CBI32503.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  101 bits (251), Expect = 2e-19
 Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
 Frame = +1

Query: 391 SSRLYDEKYVANSVAIAQKKQRAMEATAAFTSDNPFCSVTLHPSYV-DRKLVVLPSAFAK 567
           SS L + +     V   ++K+RA+ A   F   NPFC V L  SYV +R L+ +PS FA+
Sbjct: 213 SSELTNSECKRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAE 272

Query: 568 KFLKYAPREVTLRVSNGNTWHAQYSAGFHHV-IQRGWSAFALDNNLKENDVCIFELIDQK 744
           K+L    + + L+ S+G  WH +  +G   V + +GW+ F  DNNL+E DVC+FELI+ +
Sbjct: 273 KYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCVFELINME 332

Query: 745 HITMKVSIIR 774
            + +KVSI R
Sbjct: 333 DVVLKVSIFR 342


>ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Vitis vinifera]
          Length = 407

 Score =  100 bits (249), Expect = 4e-19
 Identities = 50/117 (42%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
 Frame = +1

Query: 430 VAIAQKKQRAMEATAAFTSDNPFCSVTLHPSYV-DRKLVVLPSAFAKKFLKYAPREVTLR 606
           V   ++K+RA+ A   F   NPFC V L  SYV +R L+ +PS FA+K+L    + + L+
Sbjct: 278 VVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYLNGVSKFIKLQ 337

Query: 607 VSNGNTWHAQYSAGFHHV-IQRGWSAFALDNNLKENDVCIFELIDQKHITMKVSIIR 774
            S+G  WH +  +G   V + +GW+ F  DNNL+E DVC+FELI+ + + +KVSI R
Sbjct: 338 TSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFR 394


>emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]
          Length = 563

 Score =  100 bits (249), Expect = 4e-19
 Identities = 50/117 (42%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
 Frame = +1

Query: 430 VAIAQKKQRAMEATAAFTSDNPFCSVTLHPSYV-DRKLVVLPSAFAKKFLKYAPREVTLR 606
           V   ++K+RA+ A   F   NPFC V L  SYV +R L+ +PS FA+K+L    + + L+
Sbjct: 434 VVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYLNGVSKFIKLQ 493

Query: 607 VSNGNTWHAQYSAGFHHV-IQRGWSAFALDNNLKENDVCIFELIDQKHITMKVSIIR 774
            S+G  WH +  +G   V + +GW+ F  DNNL+E DVC+FELI+ + + +KVSI R
Sbjct: 494 TSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFR 550


>ref|XP_003541121.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 436

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
 Frame = +1

Query: 397 RLYDEKYVANSVAIAQKKQRAMEATAAFTSDNPFCSVTLHPSYVDRKLVV-LPSAFAKKF 573
           R Y+          A++++RA+ A  AF   NPFC V L PSY+ R  ++ LPS FA+K 
Sbjct: 263 RFYESASARKRTVTAEERERAINAAKAFEPPNPFCRVVLRPSYLYRGCIMYLPSCFAEKH 322

Query: 574 LKYAPREVTLRVSNGNTWHAQ--YSAGFHHVIQRGWSAFALDNNLKENDVCIFELIDQKH 747
           L      + L++SNG  W  +  Y  G    + +GW  F+L+NNL E DVC+FEL+  K 
Sbjct: 323 LNGVSGFIKLQISNGRQWPVRCLYRGG-RAKLSQGWFEFSLENNLGEGDVCVFELLRMKE 381

Query: 748 ITMKVSIIR 774
           + ++V++ R
Sbjct: 382 VVLQVTVFR 390


>ref|XP_003606842.1| B3 domain-containing transcription factor VRN1 [Medicago
           truncatula] gi|355507897|gb|AES89039.1| B3
           domain-containing transcription factor VRN1 [Medicago
           truncatula]
          Length = 429

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
 Frame = +1

Query: 394 SRLYDEKYVANSVAIAQKKQRAMEATAAFTSDNPFCSVTLHPSYVDRKLVV-LPSAFAKK 570
           +R Y+        A A+++++A+ A   F   NPFC V L PSY+ R  ++ LPS FA+K
Sbjct: 260 NRFYESASARKRTATAEEREKAINAAKTFEPSNPFCRVVLRPSYLYRGCIMYLPSCFAEK 319

Query: 571 FLKYAPREVTLRVSNGNTWHAQ--YSAGFHHVIQRGWSAFALDNNLKENDVCIFELIDQK 744
            L      + L++S+G  W  +  Y  G    + +GW  F+L+NNL E DVC+FEL+  K
Sbjct: 320 NLNGVSGIIKLQISDGRQWPVRCLYRGG-RAKLSQGWFEFSLENNLGEGDVCVFELVATK 378

Query: 745 HITMKVSIIRHT 780
            + ++V++ R T
Sbjct: 379 EVVLQVTVFRIT 390


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