BLASTX nr result

ID: Coptis23_contig00018342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018342
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264182.1| PREDICTED: protein transport protein SFT2 [V...   308   2e-81
ref|XP_002524595.1| Protein transport protein SFT2, putative [Ri...   304   2e-80
ref|XP_002273570.1| PREDICTED: protein transport protein SFT2 [V...   301   2e-79
ref|XP_002320536.1| predicted protein [Populus trichocarpa] gi|2...   298   2e-78
ref|XP_004139775.1| PREDICTED: protein transport protein SFT2-li...   291   2e-76

>ref|XP_002264182.1| PREDICTED: protein transport protein SFT2 [Vitis vinifera]
            gi|296085064|emb|CBI28479.3| unnamed protein product
            [Vitis vinifera]
          Length = 225

 Score =  308 bits (789), Expect = 2e-81
 Identities = 161/231 (69%), Positives = 177/231 (76%), Gaps = 2/231 (0%)
 Frame = -2

Query: 1036 MQKTAQSWFMGGPSTNNDQKAS--SLLADWNXXXXXXXXXXXXXXXXSNLGFDLEAAVRT 863
            MQKTAQ+WFMGGPS+++ ++ S  SLLADWN                  LGFDLEAAVRT
Sbjct: 1    MQKTAQAWFMGGPSSSSGREKSPASLLADWNAYAASQEPDSSA------LGFDLEAAVRT 54

Query: 862  ANDTVSGTFGVVSKGVRDLPGSLQSATSNVPSGKSLMYFGILLACGIFFVFIAFTMFLPV 683
            AND VSG+F VVSKGVRD+PGS QSA +NVPSGKSLMYF +LLA GIFFVFIAF MFLPV
Sbjct: 55   ANDKVSGSFNVVSKGVRDIPGSFQSAATNVPSGKSLMYFSLLLAAGIFFVFIAFAMFLPV 114

Query: 682  MVLMPQKFALCFTFGCTFIIGSFFALKGPKNQLSHMISKERLPFTLGFFGSMVGTIYVSM 503
            MVLMPQKFA+CFT GC FIIGSFFALKGPKNQL+HM S+ERLPFTLGF  SMVGTIYVSM
Sbjct: 115  MVLMPQKFAICFTIGCVFIIGSFFALKGPKNQLAHMFSRERLPFTLGFISSMVGTIYVSM 174

Query: 502  XXXXXXXXXXXXXXXXXXXSYYAISYFPGGSSGLKFLSSTLTSSILRCFGR 350
                               SYYAISYFPGGS+G+KFLSSTLTS IL+CFGR
Sbjct: 175  VLHSYVFSVLFSVLQVLALSYYAISYFPGGSAGMKFLSSTLTSLILKCFGR 225


>ref|XP_002524595.1| Protein transport protein SFT2, putative [Ricinus communis]
            gi|223536148|gb|EEF37803.1| Protein transport protein
            SFT2, putative [Ricinus communis]
          Length = 225

 Score =  304 bits (779), Expect = 2e-80
 Identities = 156/231 (67%), Positives = 176/231 (76%), Gaps = 2/231 (0%)
 Frame = -2

Query: 1036 MQKTAQSWFMGGPSTNN--DQKASSLLADWNXXXXXXXXXXXXXXXXSNLGFDLEAAVRT 863
            MQKTAQSWF GGPS+    + +  SLLA+WN                 +LGFDLEAAVRT
Sbjct: 1    MQKTAQSWFTGGPSSTTPYNDEPKSLLANWNAYAASQDSDSS------SLGFDLEAAVRT 54

Query: 862  ANDTVSGTFGVVSKGVRDLPGSLQSATSNVPSGKSLMYFGILLACGIFFVFIAFTMFLPV 683
             +D  +GTF VVSKGVRDLPG+ QSAT+NVPSGKSLMYFG+LLA G+FF+FIAFTMFLPV
Sbjct: 55   TSDKFTGTFNVVSKGVRDLPGNFQSATTNVPSGKSLMYFGVLLAAGVFFIFIAFTMFLPV 114

Query: 682  MVLMPQKFALCFTFGCTFIIGSFFALKGPKNQLSHMISKERLPFTLGFFGSMVGTIYVSM 503
            MVL+PQKFA+CFT GC FIIGSFFALKGP+NQL+HM SKERLPFTLGF G+MVGT+YVSM
Sbjct: 115  MVLVPQKFAICFTVGCAFIIGSFFALKGPRNQLAHMSSKERLPFTLGFIGTMVGTVYVSM 174

Query: 502  XXXXXXXXXXXXXXXXXXXSYYAISYFPGGSSGLKFLSSTLTSSILRCFGR 350
                               SYYAISYFPGGS+GLKFLSST TSS+LRCFGR
Sbjct: 175  VLHSYVLSVLFSVLQVLALSYYAISYFPGGSTGLKFLSSTFTSSLLRCFGR 225


>ref|XP_002273570.1| PREDICTED: protein transport protein SFT2 [Vitis vinifera]
            gi|296089976|emb|CBI39795.3| unnamed protein product
            [Vitis vinifera]
          Length = 232

 Score =  301 bits (770), Expect = 2e-79
 Identities = 160/230 (69%), Positives = 175/230 (76%), Gaps = 6/230 (2%)
 Frame = -2

Query: 1021 QSWFMGGPSTNND-QKASS-----LLADWNXXXXXXXXXXXXXXXXSNLGFDLEAAVRTA 860
            QSWF   PS + D QKASS     LLA WN                  +GFDLE+AVR+A
Sbjct: 5    QSWF--SPSGSEDLQKASSSSSSSLLAQWNSYAAESRSSEEEGSLGMGMGFDLESAVRSA 62

Query: 859  NDTVSGTFGVVSKGVRDLPGSLQSATSNVPSGKSLMYFGILLACGIFFVFIAFTMFLPVM 680
            NDTV+GTF VVSKGVRDLPG++QSATSNVPSG+SLMYFGILLA G+FFVFIAFTMFLPVM
Sbjct: 63   NDTVTGTFSVVSKGVRDLPGNIQSATSNVPSGRSLMYFGILLATGVFFVFIAFTMFLPVM 122

Query: 679  VLMPQKFALCFTFGCTFIIGSFFALKGPKNQLSHMISKERLPFTLGFFGSMVGTIYVSMX 500
            VLMPQKFALCFT GC+FIIGSFFALKGPKNQL+HM +KERLPFTLGF GSMVGTIYVSM 
Sbjct: 123  VLMPQKFALCFTIGCSFIIGSFFALKGPKNQLAHMSTKERLPFTLGFIGSMVGTIYVSMV 182

Query: 499  XXXXXXXXXXXXXXXXXXSYYAISYFPGGSSGLKFLSSTLTSSILRCFGR 350
                              +YYAISYFPGGS+GLKFLSS LTSSIL+CFGR
Sbjct: 183  LHSYILSVLFSVLQVLALAYYAISYFPGGSAGLKFLSSALTSSILKCFGR 232


>ref|XP_002320536.1| predicted protein [Populus trichocarpa] gi|222861309|gb|EEE98851.1|
            predicted protein [Populus trichocarpa]
          Length = 305

 Score =  298 bits (762), Expect = 2e-78
 Identities = 158/234 (67%), Positives = 174/234 (74%), Gaps = 5/234 (2%)
 Frame = -2

Query: 1036 MQKTAQSWFMGGPSTNNDQKASS-----LLADWNXXXXXXXXXXXXXXXXSNLGFDLEAA 872
            MQKTAQSWF GGP T NDQK+SS     LL+DWN                    FDLEAA
Sbjct: 79   MQKTAQSWFTGGP-TFNDQKSSSSSSPSLLSDWNAYAASQESDSSAPV------FDLEAA 131

Query: 871  VRTANDTVSGTFGVVSKGVRDLPGSLQSATSNVPSGKSLMYFGILLACGIFFVFIAFTMF 692
            VRT +D VSGTF VVSKGVRD+PGS QS+T NVPSG+S +YFGILLA G+FFVFIAFTMF
Sbjct: 132  VRTTSDKVSGTFNVVSKGVRDIPGSFQSSTINVPSGQSFVYFGILLAAGVFFVFIAFTMF 191

Query: 691  LPVMVLMPQKFALCFTFGCTFIIGSFFALKGPKNQLSHMISKERLPFTLGFFGSMVGTIY 512
            LPVMVL+PQKFA+CFT GC  I+ SFFALKGPKNQL+HMISKERLPFTLGF  +MVGT+Y
Sbjct: 192  LPVMVLVPQKFAICFTIGCALIVASFFALKGPKNQLAHMISKERLPFTLGFISTMVGTVY 251

Query: 511  VSMXXXXXXXXXXXXXXXXXXXSYYAISYFPGGSSGLKFLSSTLTSSILRCFGR 350
            VSM                   SYYAISYFPGGS+GLKFLSSTLT+SILRCFGR
Sbjct: 252  VSMVLHSYILSVLFSVLQVLALSYYAISYFPGGSTGLKFLSSTLTASILRCFGR 305


>ref|XP_004139775.1| PREDICTED: protein transport protein SFT2-like [Cucumis sativus]
            gi|449502881|ref|XP_004161769.1| PREDICTED: protein
            transport protein SFT2-like [Cucumis sativus]
          Length = 230

 Score =  291 bits (745), Expect = 2e-76
 Identities = 148/232 (63%), Positives = 173/232 (74%), Gaps = 3/232 (1%)
 Frame = -2

Query: 1036 MQKTAQSWFMGGPSTNNDQK---ASSLLADWNXXXXXXXXXXXXXXXXSNLGFDLEAAVR 866
            MQK AQ WF  G S+ +D +   +SSLLADWN                  +G DLE+AVR
Sbjct: 1    MQKMAQGWFTQGGSSGSDNQLKTSSSLLADWNSYAESQAADDSTFNL--GIGLDLESAVR 58

Query: 865  TANDTVSGTFGVVSKGVRDLPGSLQSATSNVPSGKSLMYFGILLACGIFFVFIAFTMFLP 686
            +AN+TVSGTF VVSKGVR+LPG+ QSATSNVPSGK+LMYFG+ LA G+FF+FIAFTMFLP
Sbjct: 59   SANETVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLP 118

Query: 685  VMVLMPQKFALCFTFGCTFIIGSFFALKGPKNQLSHMISKERLPFTLGFFGSMVGTIYVS 506
            VMVLMPQKFA+CFT GC FIIGSFFALKGPKNQL+HM SKERLPFT+ F GSM+GT+YVS
Sbjct: 119  VMVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVS 178

Query: 505  MXXXXXXXXXXXXXXXXXXXSYYAISYFPGGSSGLKFLSSTLTSSILRCFGR 350
            M                   +YYA+SYFPGGS+G+KFLSS LTSS+ +CFGR
Sbjct: 179  MGLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 230


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