BLASTX nr result

ID: Coptis23_contig00018326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018326
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271925.1| PREDICTED: solute carrier family 35 member F...   144   1e-32
emb|CAN71236.1| hypothetical protein VITISV_014866 [Vitis vinifera]   144   1e-32
ref|XP_002530543.1| conserved hypothetical protein [Ricinus comm...   139   4e-31
ref|XP_003535795.1| PREDICTED: solute carrier family 35 member F...   138   1e-30
gb|AFK45870.1| unknown [Lotus japonicus]                              137   2e-30

>ref|XP_002271925.1| PREDICTED: solute carrier family 35 member F1 [Vitis vinifera]
           gi|297745172|emb|CBI39164.3| unnamed protein product
           [Vitis vinifera]
          Length = 357

 Score =  144 bits (363), Expect = 1e-32
 Identities = 76/139 (54%), Positives = 92/139 (66%), Gaps = 3/139 (2%)
 Frame = +2

Query: 5   WSAGAVLPFTGFAAAMFVFYSTVPILLKRSGSTMLNLSLLTSDMWAVLIRIFAYHEKVDW 184
           WSAGA LPF GF+AAMF+FYS VP+LLK SGS MLNLSLLTSDMWAV IRIFAYH+KVDW
Sbjct: 222 WSAGAALPFVGFSAAMFMFYSLVPVLLKLSGSAMLNLSLLTSDMWAVFIRIFAYHQKVDW 281

Query: 185 MYXXXXXXXXLGLVIYSGGSKEDE---SEMRTEVGEQSKERDEELGVKDQDKECTVESCK 355
           MY        +GLVIYSGG K+DE   +++  E  E+S+  DEE G  + +     +S  
Sbjct: 282 MYFIAFAAVVIGLVIYSGGDKDDEQHTADVADEDAERSRHFDEEAGPGNSN-----QSSM 336

Query: 356 RGDGKNGSCTRTDQAETTG 412
            G  + G   + D A   G
Sbjct: 337 AGGSRIGDSNKDDSAPKKG 355


>emb|CAN71236.1| hypothetical protein VITISV_014866 [Vitis vinifera]
          Length = 191

 Score =  144 bits (363), Expect = 1e-32
 Identities = 76/139 (54%), Positives = 92/139 (66%), Gaps = 3/139 (2%)
 Frame = +2

Query: 5   WSAGAVLPFTGFAAAMFVFYSTVPILLKRSGSTMLNLSLLTSDMWAVLIRIFAYHEKVDW 184
           WSAGA LPF GF+AAMF+FYS VP+LLK SGS MLNLSLLTSDMWAV IRIFAYH+KVDW
Sbjct: 56  WSAGAALPFVGFSAAMFMFYSLVPVLLKLSGSAMLNLSLLTSDMWAVFIRIFAYHQKVDW 115

Query: 185 MYXXXXXXXXLGLVIYSGGSKEDE---SEMRTEVGEQSKERDEELGVKDQDKECTVESCK 355
           MY        +GLVIYSGG K+DE   +++  E  E+S+  DEE G  + +     +S  
Sbjct: 116 MYFIAFAAVVIGLVIYSGGDKDDEQHTADVADEDAERSRHFDEEAGPGNSN-----QSSM 170

Query: 356 RGDGKNGSCTRTDQAETTG 412
            G  + G   + D A   G
Sbjct: 171 AGGSRIGDSNKDDSAPKKG 189


>ref|XP_002530543.1| conserved hypothetical protein [Ricinus communis]
           gi|223529905|gb|EEF31834.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 398

 Score =  139 bits (351), Expect = 4e-31
 Identities = 72/122 (59%), Positives = 84/122 (68%), Gaps = 2/122 (1%)
 Frame = +2

Query: 5   WSAGAVLPFTGFAAAMFVFYSTVPILLKRSGSTMLNLSLLTSDMWAVLIRIFAYHEKVDW 184
           WSAGA LPF GFA AMF+FYS VP+LLK +GSTMLNLSLLTSDMWAVLIRIFAYH+KVDW
Sbjct: 246 WSAGAALPFFGFALAMFLFYSFVPVLLKINGSTMLNLSLLTSDMWAVLIRIFAYHDKVDW 305

Query: 185 MYXXXXXXXXLGLVIYSGGSKEDE--SEMRTEVGEQSKERDEELGVKDQDKECTVESCKR 358
           MY        +GL+IYSGG KE++  +++  E  +Q K  DEE             S K 
Sbjct: 306 MYYVAFAAVVIGLIIYSGGDKEEDHRADVADEEAKQIKHLDEEGAAGSHSYTTLAGSSKT 365

Query: 359 GD 364
           GD
Sbjct: 366 GD 367


>ref|XP_003535795.1| PREDICTED: solute carrier family 35 member F1-like [Glycine max]
          Length = 329

 Score =  138 bits (347), Expect = 1e-30
 Identities = 71/104 (68%), Positives = 80/104 (76%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2   HWSAGAVLPFTGFAAAMFVFYSTVPILLKRSGSTMLNLSLLTSDMWAVLIRIFAYHEKVD 181
           HWSAGAVLPF GFA AMF+FYS VP+LLK +GSTMLNLSLLTSDMWAVLIRIFAYHEKVD
Sbjct: 221 HWSAGAVLPFVGFAVAMFMFYSLVPVLLKINGSTMLNLSLLTSDMWAVLIRIFAYHEKVD 280

Query: 182 WMYXXXXXXXXLGLVIYSGGSKEDESEMRTEVGEQSKER--DEE 307
           WMY        +GL+IYSGG   DE++    V E + +R  DEE
Sbjct: 281 WMYYVAFGAVVVGLIIYSGGD-GDENQDPHHVAEDASQRQHDEE 323


>gb|AFK45870.1| unknown [Lotus japonicus]
          Length = 346

 Score =  137 bits (344), Expect = 2e-30
 Identities = 69/128 (53%), Positives = 85/128 (66%)
 Frame = +2

Query: 2   HWSAGAVLPFTGFAAAMFVFYSTVPILLKRSGSTMLNLSLLTSDMWAVLIRIFAYHEKVD 181
           HWSAGA LPF GF+ AMF+FYS VP+LLK +GSTMLNLSLLTSDMWAV+IRIFAYHEKVD
Sbjct: 222 HWSAGAALPFVGFSVAMFMFYSLVPVLLKINGSTMLNLSLLTSDMWAVVIRIFAYHEKVD 281

Query: 182 WMYXXXXXXXXLGLVIYSGGSKEDESEMRTEVGEQSKERDEELGVKDQDKECTVESCKRG 361
           WMY        +G++IYSGG K+++ +       +   R +      QD+E    +  RG
Sbjct: 282 WMYFVAFGAVTVGILIYSGGDKDEDEDQHPLNSAEDPPRIK------QDEEAKSGNSSRG 335

Query: 362 DGKNGSCT 385
            G   S T
Sbjct: 336 TGAGSSKT 343


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