BLASTX nr result
ID: Coptis23_contig00018317
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00018317
(612 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002450018.1| hypothetical protein SORBIDRAFT_05g027120 [S... 67 1e-16
ref|XP_003520409.1| PREDICTED: uncharacterized protein LOC100775... 60 1e-15
gb|AAK54302.1|AC034258_20 putative helicase [Oryza sativa Japoni... 65 2e-15
ref|XP_003332640.1| hypothetical protein PGTG_14305 [Puccinia gr... 55 3e-15
ref|XP_003605521.1| Helicase-like protein [Medicago truncatula] ... 61 5e-15
>ref|XP_002450018.1| hypothetical protein SORBIDRAFT_05g027120 [Sorghum bicolor]
gi|241935861|gb|EES09006.1| hypothetical protein
SORBIDRAFT_05g027120 [Sorghum bicolor]
Length = 384
Score = 67.0 bits (162), Expect(2) = 1e-16
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Frame = -3
Query: 610 RIGDLLPQEGQRPRYLQMYVYDTDHEIDNRL-------VENNSLDRAVLAILKKTLDSCN 452
RIG LLPQ+G P+++Q+Y+YDT +EI NRL +LD +++ L LD N
Sbjct: 42 RIGSLLPQQGTPPKFIQLYIYDTSNEISNRLEALDYAEASEGNLDTSIVQALISMLDEHN 101
Query: 451 PFVGILR----QIAQRDDYHNVKLHIKDHPDALPQYNLPTTHKL 332
PFV R ++ + D V + PQY+LPTT+ L
Sbjct: 102 PFVKQFRIARDRLQEHGDEEFVIRIVGPREGDPPQYSLPTTNHL 145
Score = 44.7 bits (104), Expect(2) = 1e-16
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = -2
Query: 329 AILDGGEDPFDRNDRDIIIETAHGHLYHLPDTAGFYDPLQYPLLFPYGTFGWDLTI---- 162
A+L G+ D RDI+IET G L + + PLQYPLLFP+G G+ + +
Sbjct: 146 AMLVVGDFTVDAYQRDIVIETHAGELKQISALHPAFMPLQYPLLFPFGERGYQVGVPYEG 205
Query: 161 ----FASNLKRVSCRAFYSYKL 108
+ +V+ + +Y Y L
Sbjct: 206 TESTSTNTRTKVTMQDYYRYML 227
>ref|XP_003520409.1| PREDICTED: uncharacterized protein LOC100775782 [Glycine max]
Length = 1412
Score = 60.1 bits (144), Expect(2) = 1e-15
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Frame = -2
Query: 338 QVAAILDGGEDPFDRND-RDIIIETAHGHLYHLPDTAGFYDPLQYPLLFPYGTFGWDLTI 162
+VAA++ G FD N RDIIIET HG L + + Y PLQYPLLFPYG G+ I
Sbjct: 568 EVAALIVGD---FDANSKRDIIIETQHGQLQRIHELHSSYLPLQYPLLFPYGENGYRPDI 624
Query: 161 FASN--------LKRVSCRAFYSYKLQ 105
S+ R++ R ++SY+LQ
Sbjct: 625 LHSSRSDGKKRKRNRLTMREWFSYRLQ 651
Score = 48.1 bits (113), Expect(2) = 1e-15
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Frame = -3
Query: 610 RIGDLLPQEGQRPRYLQMYVYDTDHEIDNRL----VENNSLDRAVLAILKKTLDSCNPFV 443
RIG +LP G+ P++ Q+Y++DT++E+ NR+ +N + +++ L + LD N
Sbjct: 469 RIGSMLPMPGKEPKFAQLYIFDTENEVHNRINAISSPHNQIQEHIVSQLSEMLDEYNVHA 528
Query: 442 GILRQIAQR---DDYHNVKLH-IKDHPDALPQYNLPT 344
R R +N+K I + YN+PT
Sbjct: 529 KTFRMARDRLQDVQVNNIKFKLIANREKHGRTYNVPT 565
>gb|AAK54302.1|AC034258_20 putative helicase [Oryza sativa Japonica Group]
gi|31432486|gb|AAP54108.1| AT hook motif-containing
protein, putative [Oryza sativa Japonica Group]
Length = 1573
Score = 64.7 bits (156), Expect(2) = 2e-15
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Frame = -3
Query: 607 IGDLLPQEGQRPRYLQMYVYDTDHEIDNRL------VENNSLDRAVLAILKKTLDSCNPF 446
IG LLP+ +PR+ Q+Y+YDT++EI NR+ N SLD +A L LD N
Sbjct: 279 IGTLLPKGSNKPRFQQLYIYDTENEIKNRIEASRSGTRNASLDEKTIAGLLTMLDENNTL 338
Query: 445 VGILRQIAQR---DDYHNVKLHIKDHPDA-LPQYNLPTTHKL 332
R +R DDYHN L + D+ D Q N+P+T ++
Sbjct: 339 AQTFRMARERFKEDDYHNYTLRLLDNRDQDGRQNNMPSTSEV 380
Score = 43.1 bits (100), Expect(2) = 2e-15
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Frame = -2
Query: 341 SQVAAILDGGEDPFDRN-DRDIIIETAHGHLYHLPDTAGFYDPLQYPLLFPYGTFGWDLT 165
S+VA ++ +DP +++ RDI++E + +T + +QYPLLFPYG G+ L
Sbjct: 378 SEVAMLIV--KDPTEKSYGRDIVLEYKDMRPKRISETHPKFMAMQYPLLFPYGEDGYRLG 435
Query: 164 IFAS-------NLKRVSCRAFYSYKLQ 105
I S + K V+ R +Y+Y+LQ
Sbjct: 436 IKYSGKDGVRYDKKCVTMREYYAYRLQ 462
>ref|XP_003332640.1| hypothetical protein PGTG_14305 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 565
Score = 55.5 bits (132), Expect(2) = 3e-15
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = -3
Query: 607 IGDLLPQEGQRPRYLQMYVYDTDHEIDNRLVENNSLDRAVLAILKKTLDSCNPFVGILRQ 428
IG L+P + P++LQ+Y+YD ++E +NR L ++ +++ L NP + +
Sbjct: 388 IGSLIPMSQEVPKFLQLYIYDNENEFENRQHHGRDLIPELMGRIQEILHRSNPLIRQFER 447
Query: 427 IAQRDDYHNVKLHIKDHPDALPQ--YNLPTTHKLQQYWMEG 311
+A + N + + ++ + Q YNLPT ++ W+EG
Sbjct: 448 VAS-EISPNRSIRLTNNASNVDQRVYNLPTGDQIAAIWVEG 487
Score = 51.6 bits (122), Expect(2) = 3e-15
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = -2
Query: 338 QVAAILDGGEDPFDRNDRDIIIETAHGHLYHLPDTAGFYDPLQYPLLFPYGTFGWDLTIF 159
Q+AAI G DP + RD+II+ H +L + + YDPL Y LL P G GW +
Sbjct: 479 QIAAIWVEGNDPSTTDTRDVIIKYRHQNLSRISELDRKYDPLHYVLLHPNGELGWSPEL- 537
Query: 158 ASNLKRVSCRAFYSYKL 108
+ + +Y+Y+L
Sbjct: 538 KEEMPNATAMNYYAYQL 554
>ref|XP_003605521.1| Helicase-like protein [Medicago truncatula]
gi|355506576|gb|AES87718.1| Helicase-like protein
[Medicago truncatula]
Length = 1262
Score = 61.2 bits (147), Expect(2) = 5e-15
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
Frame = -3
Query: 610 RIGDLLPQEGQRPRYLQMYVYDTDHEIDNRLV------ENNSLDRAVLAILKKTLDSCNP 449
+IG LLP+ G +PR+ Q+Y+YDTD+E+ NR++ + S+ + ++ L+ LD+ N
Sbjct: 287 QIGSLLPKHGDQPRFAQLYIYDTDNELSNRMLSVRMEDDKKSIKKTIVKELRHILDNSNS 346
Query: 448 FVGILRQIAQ---RDDYHNVKLHI--KDHPDALPQYNLPTTHKL 332
FV R + D+ +KL I K D +YNLPT ++
Sbjct: 347 FVKSYRMVRDTLLEDNAPQIKLRILGKRGYDG-RRYNLPTASEV 389
Score = 45.1 bits (105), Expect(2) = 5e-15
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Frame = -2
Query: 341 SQVAAILDGGEDPFDRNDRDIIIETAHGHLYHLPDTAGFYDPLQYPLLFPYGTFGWDLTI 162
S+VAA++ G D D +RD+++E G L + Y PLQYPL+FP G G+ I
Sbjct: 387 SEVAALVVGDYDAADF-ERDVVVEERSGLLKRISVFETSYLPLQYPLIFPRGEDGFRRDI 445
Query: 161 -FASNLKR-------VSCRAFYSYKLQ 105
F K+ VS + +++YK+Q
Sbjct: 446 RFTDRPKKKPIKRIFVSMKEWFAYKIQ 472