BLASTX nr result

ID: Coptis23_contig00018305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018305
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164650.1| PREDICTED: uncharacterized LOC101219588 [Cuc...   113   2e-23
ref|XP_004147446.1| PREDICTED: uncharacterized protein LOC101219...   113   2e-23
ref|XP_002300026.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_002267612.1| PREDICTED: gibberellin-regulated protein 14 ...   112   2e-23
gb|AFK78108.1| snakin-2-like protein [Nicotiana tabacum]              111   5e-23

>ref|XP_004164650.1| PREDICTED: uncharacterized LOC101219588 [Cucumis sativus]
          Length = 231

 Score =  113 bits (282), Expect = 2e-23
 Identities = 46/67 (68%), Positives = 53/67 (79%)
 Frame = -3

Query: 346 PPVSITACPTLCGGRCKLHSRIRHCTRVCNTCCQRCKCVPPGTFGNKEMCGKCYTEMTTH 167
           PPV   AC   CG RC+LHSR + C R C TCC RCKCVPPGT+GN+E+CGKCYT+MTTH
Sbjct: 165 PPVLGKACYPECGRRCQLHSRKKICLRACLTCCDRCKCVPPGTYGNREVCGKCYTDMTTH 224

Query: 166 GNRPKCP 146
           G+R KCP
Sbjct: 225 GSRSKCP 231


>ref|XP_004147446.1| PREDICTED: uncharacterized protein LOC101219588 [Cucumis sativus]
          Length = 231

 Score =  113 bits (282), Expect = 2e-23
 Identities = 46/67 (68%), Positives = 53/67 (79%)
 Frame = -3

Query: 346 PPVSITACPTLCGGRCKLHSRIRHCTRVCNTCCQRCKCVPPGTFGNKEMCGKCYTEMTTH 167
           PPV   AC   CG RC+LHSR + C R C TCC RCKCVPPGT+GN+E+CGKCYT+MTTH
Sbjct: 165 PPVLGKACYPECGRRCQLHSRKKICLRACLTCCDRCKCVPPGTYGNREVCGKCYTDMTTH 224

Query: 166 GNRPKCP 146
           G+R KCP
Sbjct: 225 GSRSKCP 231


>ref|XP_002300026.1| predicted protein [Populus trichocarpa] gi|222847284|gb|EEE84831.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  112 bits (281), Expect = 2e-23
 Identities = 47/68 (69%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = -3

Query: 346 PPVSITA-CPTLCGGRCKLHSRIRHCTRVCNTCCQRCKCVPPGTFGNKEMCGKCYTEMTT 170
           PPV   + C  LCG RCKLHSR R C R C TCC RCKCVPPGT+GN+E CGKCYT+MTT
Sbjct: 156 PPVRTRSDCTPLCGQRCKLHSRKRLCVRACMTCCDRCKCVPPGTYGNREKCGKCYTDMTT 215

Query: 169 HGNRPKCP 146
             N+PKCP
Sbjct: 216 RRNKPKCP 223


>ref|XP_002267612.1| PREDICTED: gibberellin-regulated protein 14 [Vitis vinifera]
           gi|296086511|emb|CBI32100.3| unnamed protein product
           [Vitis vinifera]
          Length = 108

 Score =  112 bits (281), Expect = 2e-23
 Identities = 45/60 (75%), Positives = 48/60 (80%)
 Frame = -3

Query: 325 CPTLCGGRCKLHSRIRHCTRVCNTCCQRCKCVPPGTFGNKEMCGKCYTEMTTHGNRPKCP 146
           C  LC  RC LHSR   CTR C TCC RCKCVPPGT+GN+EMCG CYTEMTTHGN+PKCP
Sbjct: 49  CGGLCKERCSLHSRPNVCTRACGTCCVRCKCVPPGTYGNREMCGTCYTEMTTHGNKPKCP 108


>gb|AFK78108.1| snakin-2-like protein [Nicotiana tabacum]
          Length = 147

 Score =  111 bits (278), Expect = 5e-23
 Identities = 47/67 (70%), Positives = 50/67 (74%)
 Frame = -3

Query: 346 PPVSITACPTLCGGRCKLHSRIRHCTRVCNTCCQRCKCVPPGTFGNKEMCGKCYTEMTTH 167
           P  S   C  LC  RC LHSR + C R C TCC RCKCVPPGTFGN+EMCGKCYTEMTTH
Sbjct: 81  PHPSQLDCGGLCKYRCSLHSRPKVCIRACGTCCLRCKCVPPGTFGNREMCGKCYTEMTTH 140

Query: 166 GNRPKCP 146
           GN+ KCP
Sbjct: 141 GNKTKCP 147


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