BLASTX nr result
ID: Coptis23_contig00018305
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00018305 (408 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004164650.1| PREDICTED: uncharacterized LOC101219588 [Cuc... 113 2e-23 ref|XP_004147446.1| PREDICTED: uncharacterized protein LOC101219... 113 2e-23 ref|XP_002300026.1| predicted protein [Populus trichocarpa] gi|2... 112 2e-23 ref|XP_002267612.1| PREDICTED: gibberellin-regulated protein 14 ... 112 2e-23 gb|AFK78108.1| snakin-2-like protein [Nicotiana tabacum] 111 5e-23 >ref|XP_004164650.1| PREDICTED: uncharacterized LOC101219588 [Cucumis sativus] Length = 231 Score = 113 bits (282), Expect = 2e-23 Identities = 46/67 (68%), Positives = 53/67 (79%) Frame = -3 Query: 346 PPVSITACPTLCGGRCKLHSRIRHCTRVCNTCCQRCKCVPPGTFGNKEMCGKCYTEMTTH 167 PPV AC CG RC+LHSR + C R C TCC RCKCVPPGT+GN+E+CGKCYT+MTTH Sbjct: 165 PPVLGKACYPECGRRCQLHSRKKICLRACLTCCDRCKCVPPGTYGNREVCGKCYTDMTTH 224 Query: 166 GNRPKCP 146 G+R KCP Sbjct: 225 GSRSKCP 231 >ref|XP_004147446.1| PREDICTED: uncharacterized protein LOC101219588 [Cucumis sativus] Length = 231 Score = 113 bits (282), Expect = 2e-23 Identities = 46/67 (68%), Positives = 53/67 (79%) Frame = -3 Query: 346 PPVSITACPTLCGGRCKLHSRIRHCTRVCNTCCQRCKCVPPGTFGNKEMCGKCYTEMTTH 167 PPV AC CG RC+LHSR + C R C TCC RCKCVPPGT+GN+E+CGKCYT+MTTH Sbjct: 165 PPVLGKACYPECGRRCQLHSRKKICLRACLTCCDRCKCVPPGTYGNREVCGKCYTDMTTH 224 Query: 166 GNRPKCP 146 G+R KCP Sbjct: 225 GSRSKCP 231 >ref|XP_002300026.1| predicted protein [Populus trichocarpa] gi|222847284|gb|EEE84831.1| predicted protein [Populus trichocarpa] Length = 223 Score = 112 bits (281), Expect = 2e-23 Identities = 47/68 (69%), Positives = 52/68 (76%), Gaps = 1/68 (1%) Frame = -3 Query: 346 PPVSITA-CPTLCGGRCKLHSRIRHCTRVCNTCCQRCKCVPPGTFGNKEMCGKCYTEMTT 170 PPV + C LCG RCKLHSR R C R C TCC RCKCVPPGT+GN+E CGKCYT+MTT Sbjct: 156 PPVRTRSDCTPLCGQRCKLHSRKRLCVRACMTCCDRCKCVPPGTYGNREKCGKCYTDMTT 215 Query: 169 HGNRPKCP 146 N+PKCP Sbjct: 216 RRNKPKCP 223 >ref|XP_002267612.1| PREDICTED: gibberellin-regulated protein 14 [Vitis vinifera] gi|296086511|emb|CBI32100.3| unnamed protein product [Vitis vinifera] Length = 108 Score = 112 bits (281), Expect = 2e-23 Identities = 45/60 (75%), Positives = 48/60 (80%) Frame = -3 Query: 325 CPTLCGGRCKLHSRIRHCTRVCNTCCQRCKCVPPGTFGNKEMCGKCYTEMTTHGNRPKCP 146 C LC RC LHSR CTR C TCC RCKCVPPGT+GN+EMCG CYTEMTTHGN+PKCP Sbjct: 49 CGGLCKERCSLHSRPNVCTRACGTCCVRCKCVPPGTYGNREMCGTCYTEMTTHGNKPKCP 108 >gb|AFK78108.1| snakin-2-like protein [Nicotiana tabacum] Length = 147 Score = 111 bits (278), Expect = 5e-23 Identities = 47/67 (70%), Positives = 50/67 (74%) Frame = -3 Query: 346 PPVSITACPTLCGGRCKLHSRIRHCTRVCNTCCQRCKCVPPGTFGNKEMCGKCYTEMTTH 167 P S C LC RC LHSR + C R C TCC RCKCVPPGTFGN+EMCGKCYTEMTTH Sbjct: 81 PHPSQLDCGGLCKYRCSLHSRPKVCIRACGTCCLRCKCVPPGTFGNREMCGKCYTEMTTH 140 Query: 166 GNRPKCP 146 GN+ KCP Sbjct: 141 GNKTKCP 147