BLASTX nr result

ID: Coptis23_contig00018296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018296
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533032.1| multidrug resistance-associated protein 2, 6...   118   6e-25
gb|ABD72482.1| MRP-like ABC transporter protein [Gossypium barba...   114   6e-24
emb|CBI39702.3| unnamed protein product [Vitis vinifera]              114   1e-23
emb|CAN70764.1| hypothetical protein VITISV_025297 [Vitis vinifera]   114   1e-23
ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3...   112   2e-23

>ref|XP_002533032.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223527170|gb|EEF29340.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1233

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/70 (78%), Positives = 63/70 (90%)
 Frame = +3

Query: 3    PSGRILNRASTDQSAVDLSIPTQIGVVAFSIIQLVGIIGVMSQVAWQVCIIFVPVIGTCI 182
            PSGRILNRASTDQSAVD+ IP Q+G VAFS+IQL+GII VMSQVAWQV I+F+PVI  CI
Sbjct: 845  PSGRILNRASTDQSAVDMQIPYQVGAVAFSMIQLLGIIAVMSQVAWQVFIVFIPVIAACI 904

Query: 183  WYQQYYISTA 212
            WYQQYYI++A
Sbjct: 905  WYQQYYIASA 914


>gb|ABD72482.1| MRP-like ABC transporter protein [Gossypium barbadense]
          Length = 1075

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +3

Query: 3   PSGRILNRASTDQSAVDLSIPTQIGVVAFSIIQLVGIIGVMSQVAWQVCIIFVPVIGTCI 182
           PSGRILNRASTDQSAVD++IP Q+   AFS+IQL+GII VMSQVAWQ+ +I +PVI TCI
Sbjct: 605 PSGRILNRASTDQSAVDMNIPYQVASFAFSVIQLLGIIAVMSQVAWQIXVIXIPVIATCI 664

Query: 183 WYQQYYISTA 212
           WYQQYYIS+A
Sbjct: 665 WYQQYYISSA 674


>emb|CBI39702.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/70 (74%), Positives = 62/70 (88%)
 Frame = +3

Query: 3   PSGRILNRASTDQSAVDLSIPTQIGVVAFSIIQLVGIIGVMSQVAWQVCIIFVPVIGTCI 182
           PSGRILNRASTDQ+A+D +IP Q+G  AFS+I+L+ II VMSQVAWQV I+F+PVI TCI
Sbjct: 304 PSGRILNRASTDQNAIDTNIPMQVGAFAFSLIRLLAIIAVMSQVAWQVFIVFIPVIATCI 363

Query: 183 WYQQYYISTA 212
           WYQQYYIS+A
Sbjct: 364 WYQQYYISSA 373


>emb|CAN70764.1| hypothetical protein VITISV_025297 [Vitis vinifera]
          Length = 1428

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/70 (74%), Positives = 62/70 (88%)
 Frame = +3

Query: 3    PSGRILNRASTDQSAVDLSIPTQIGVVAFSIIQLVGIIGVMSQVAWQVCIIFVPVIGTCI 182
            PSGRILNRASTDQ+A+D +IP Q+G  AFS+I+L+ II VMSQVAWQV I+F+PVI TCI
Sbjct: 964  PSGRILNRASTDQNAIDTNIPMQVGAFAFSLIRLLAIIAVMSQVAWQVFIVFIPVIATCI 1023

Query: 183  WYQQYYISTA 212
            WYQQYYIS+A
Sbjct: 1024 WYQQYYISSA 1033


>ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 2021

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/70 (72%), Positives = 60/70 (85%)
 Frame = +3

Query: 3    PSGRILNRASTDQSAVDLSIPTQIGVVAFSIIQLVGIIGVMSQVAWQVCIIFVPVIGTCI 182
            PSGRILNRASTDQS +D ++P Q+G  AF +IQL+GII VMSQVAWQV I+F+PVI TCI
Sbjct: 1545 PSGRILNRASTDQSTIDTTMPMQVGAFAFQLIQLLGIIAVMSQVAWQVFIVFIPVIATCI 1604

Query: 183  WYQQYYISTA 212
            WYQQYYI +A
Sbjct: 1605 WYQQYYIPSA 1614


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