BLASTX nr result

ID: Coptis23_contig00018280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018280
         (1741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275742.1| PREDICTED: 5-dehydro-2-deoxygluconokinase [V...   533   e-149
ref|XP_002307634.1| predicted protein [Populus trichocarpa] gi|2...   493   e-137
ref|XP_002521000.1| ribokinase, putative [Ricinus communis] gi|2...   489   e-135
ref|XP_004146987.1| PREDICTED: 2-dehydro-3-deoxygluconokinase-li...   483   e-134
ref|XP_003536926.1| PREDICTED: fructokinase-1-like [Glycine max]      471   e-130

>ref|XP_002275742.1| PREDICTED: 5-dehydro-2-deoxygluconokinase [Vitis vinifera]
            gi|297735518|emb|CBI17958.3| unnamed protein product
            [Vitis vinifera]
          Length = 459

 Score =  533 bits (1372), Expect = e-149
 Identities = 273/463 (58%), Positives = 339/463 (73%), Gaps = 2/463 (0%)
 Frame = +3

Query: 111  SNLVQPHRIITGFFPPISVKIGVIYAKCSEVSCGKNCSSSSLNDFVEENDEKARKDIIIK 290
            S+ + PH  +    P I  +   +  K  ++S   +C ++          +     + +K
Sbjct: 5    SSPISPHNALQNPRPAIRRRFTALNCKGIQLSVPSHCYTAG--------GDCTSGGVALK 56

Query: 291  DADVATLGNLCXXXXXXXXXXXXXXFEERRAYMDKLSSLKPDKKYWEAGGNCNMVIAAAR 470
              DVATLGNLC              F +R+AYM++L++  PDKKYWEAGGNCNM IAA R
Sbjct: 57   SVDVATLGNLCVDLVLNVPELPPASFLDRKAYMERLAASPPDKKYWEAGGNCNMAIAAKR 116

Query: 471  IGLSCLSLGHVGDEIYGRFLLDVLHDEGIGMVEMSEDTDA-NAGNAAYETLLCWVLVDPL 647
            +GL C+++GHVG+EIYG FLLDVLHDEGI  V M+EDTD  ++ +A+YETLLCWVLVDPL
Sbjct: 117  LGLCCVTIGHVGNEIYGDFLLDVLHDEGIDTVGMNEDTDVVDSASASYETLLCWVLVDPL 176

Query: 648  HRHGFCSRADFSKDPAFSWMSKLSGEVKSAIKRSKILFCNGYAFDELSPSLLVSALDYAI 827
             RHGFCSRADFSK+PAFSWMSKLS EVK AI++SKILFCNGY FDELSPSL++SALDYA+
Sbjct: 177  QRHGFCSRADFSKEPAFSWMSKLSREVKMAIRKSKILFCNGYGFDELSPSLIISALDYAV 236

Query: 828  EVGTSIFFDPGPRGRTLNIGTADQRRALDKYLRMSDVLLLTSDEAESLTGITNPILAGQE 1007
            EVGTS+FFDPGPRG++L++GT +Q+RAL ++L MSDVLLLTSDEAESLTGI NPILAGQE
Sbjct: 237  EVGTSVFFDPGPRGKSLSVGTPEQQRALGQFLTMSDVLLLTSDEAESLTGIGNPILAGQE 296

Query: 1008 LLRKGMRAKWVIVKMGAKGSILITKSSVSAAPAFKVNVIDTVGCGDSFVAAIAFGFLHKM 1187
            LLRKGMR KWVIVKMG+KGSILI+ SS+S APAFKVNVIDTVGCGDSFVAAIAFGF+H +
Sbjct: 297  LLRKGMRTKWVIVKMGSKGSILISLSSISCAPAFKVNVIDTVGCGDSFVAAIAFGFIHNL 356

Query: 1188 PTXXXXXXXXXXXXXXXXXCGAGRSVATLGKVIQLLKDSNLNDD-NFLSVFLDENSHIPE 1364
            PT                 CGAGR+VA L +VI+L++ SNLN+D  F +  LD+N    +
Sbjct: 357  PTVNTLAIANAVGAATAMGCGAGRNVANLEQVIELMRASNLNEDATFWNELLDDNLDAQQ 416

Query: 1365 VILLSRASTYGSNGHLKHVSLKNVISELLSKLKAILEKRMVPS 1493
            +  LS+ +  GSN  L  V+L+ V+SE L KLK+   K +VPS
Sbjct: 417  ITFLSKTAINGSNNQLHRVALQKVVSESLCKLKSARIKGIVPS 459


>ref|XP_002307634.1| predicted protein [Populus trichocarpa] gi|222857083|gb|EEE94630.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  493 bits (1269), Expect = e-137
 Identities = 248/390 (63%), Positives = 298/390 (76%), Gaps = 1/390 (0%)
 Frame = +3

Query: 297  DVATLGNLCXXXXXXXXXXXXXXFEERRAYMDKLSSLKPDKKYWEAGGNCNMVIAAARIG 476
            DVATLGNLC               E   AYM +LS   PDKKYWEAGGNCNM IAAAR+G
Sbjct: 2    DVATLGNLCVDIVLNVPKLPPRSREASFAYMQELSKSPPDKKYWEAGGNCNMAIAAARLG 61

Query: 477  LSCLSLGHVGDEIYGRFLLDVLHDEGIGMVEMSEDTD-ANAGNAAYETLLCWVLVDPLHR 653
            L C ++GHVGDEIYG+FLLDVL +EGI MV MSED D  ++ NA+YETLLCWVLVDPL R
Sbjct: 62   LHCATIGHVGDEIYGQFLLDVLREEGISMVGMSEDGDIVDSSNASYETLLCWVLVDPLQR 121

Query: 654  HGFCSRADFSKDPAFSWMSKLSGEVKSAIKRSKILFCNGYAFDELSPSLLVSALDYAIEV 833
            HGFCSRADF +DPAFSWM+KL+ EVK AIK+SKILFCNGY FDELSP+L++ ALDYA+EV
Sbjct: 122  HGFCSRADFCEDPAFSWMTKLTEEVKMAIKQSKILFCNGYGFDELSPALIMLALDYAVEV 181

Query: 834  GTSIFFDPGPRGRTLNIGTADQRRALDKYLRMSDVLLLTSDEAESLTGITNPILAGQELL 1013
            GTS+FFDPGPRG++L  GT ++R+AL   L+MSDVLLLTSDEAESLTGI NPILAGQELL
Sbjct: 182  GTSVFFDPGPRGKSLLTGTPEERQALSHLLKMSDVLLLTSDEAESLTGIGNPILAGQELL 241

Query: 1014 RKGMRAKWVIVKMGAKGSILITKSSVSAAPAFKVNVIDTVGCGDSFVAAIAFGFLHKMPT 1193
            + G+R KWVI+KMG++GSIL+T SS+S APAFKVNVIDTVGCGDSFVAAIAFG++H +P 
Sbjct: 242  KNGIRTKWVIIKMGSRGSILVTMSSISCAPAFKVNVIDTVGCGDSFVAAIAFGYIHNIPL 301

Query: 1194 XXXXXXXXXXXXXXXXXCGAGRSVATLGKVIQLLKDSNLNDDNFLSVFLDENSHIPEVIL 1373
                             CGAGR+VATL KVI+L++ SN+N+D+     L ++    E+  
Sbjct: 302  VNTLAIANAVGAATAMGCGAGRNVATLEKVIELMRASNINEDDEFWNELVKDMDTGEITF 361

Query: 1374 LSRASTYGSNGHLKHVSLKNVISELLSKLK 1463
            LS+    G N  + HV+L+ V+SELL KL+
Sbjct: 362  LSKMVINGRNNQVNHVALQKVVSELLPKLE 391


>ref|XP_002521000.1| ribokinase, putative [Ricinus communis] gi|223539837|gb|EEF41417.1|
            ribokinase, putative [Ricinus communis]
          Length = 474

 Score =  489 bits (1258), Expect = e-135
 Identities = 249/399 (62%), Positives = 308/399 (77%), Gaps = 5/399 (1%)
 Frame = +3

Query: 285  IKDADVATLGNLCXXXXXXXXXXXXXXFEERRAYMDKLSSLKPDKKYWEAGGNCNMVIAA 464
            +K  DV+TLGNLC               + R+AYM++LS+  P K+YWEAGGNCNM IAA
Sbjct: 70   VKIIDVSTLGNLCVDIVLNVPKLPPRSPDARQAYMEQLSTSPPHKQYWEAGGNCNMAIAA 129

Query: 465  ARIGLSCLSLGHVGDEIYGRFLLDVLHDEGIGMVEMSEDTDA-NAGNAAYETLLCWVLVD 641
            AR+GL C ++GHVG+EIYG+FLLDVL DEGI MV MS++TDA ++ +A+YETLLCWVLVD
Sbjct: 130  ARLGLRCATIGHVGNEIYGKFLLDVLRDEGITMVGMSDNTDAIDSSSASYETLLCWVLVD 189

Query: 642  PLHRHGFCSRADFSKDPAFSWMSKLSGEVKSAIKRSKILFCNGYAFDELSPSLLVSALDY 821
            PL RHGFCSRADF+K+PAFSWMSKLS +VK AIK+SK+LFCNGY FDELSPSL++SA+DY
Sbjct: 190  PLQRHGFCSRADFTKEPAFSWMSKLSAKVKMAIKQSKVLFCNGYGFDELSPSLIISAVDY 249

Query: 822  AIEVGTSIFFDPGPRGRTLNIGTADQRRALDKYLRMSDVLLLTSDEAESLTGITNPILAG 1001
            A+EVGTSIFFDPGPRG++L+ GT ++R AL   L+MSDVLLLTSDEAESLTGI +P+LAG
Sbjct: 250  AVEVGTSIFFDPGPRGKSLSTGTPEERDALHHLLKMSDVLLLTSDEAESLTGIGDPLLAG 309

Query: 1002 QELLRKGMRAKWVIVKMGAKGSILITKSSVSAAPAFKVNVIDTVGCGDSFVAAIAFGFLH 1181
            Q LLR G+R KWVIVKMG+KGSIL++ S++S APAFKVNVIDTVGCGDSFVAAIAFGF+H
Sbjct: 310  QGLLRNGLRTKWVIVKMGSKGSILVSISNISCAPAFKVNVIDTVGCGDSFVAAIAFGFIH 369

Query: 1182 KMPTXXXXXXXXXXXXXXXXXCGAGRSVATLGKVIQLLKDSNLN-DDNFLSVFLDENSHI 1358
             MP                  CGAGR+VATL KVI+L++ SN+N DD F +    +N + 
Sbjct: 370  NMPLVNTLTIANAVGAATAMGCGAGRNVATLEKVIELVRGSNINEDDAFWAELFVKNLNA 429

Query: 1359 PEVILLSRASTYG---SNGHLKHVSLKNVISELLSKLKA 1466
             E+  LS+    G   SN  L  V+++ V+SELL KL++
Sbjct: 430  QEIAFLSKMVINGSKSSNKGLNRVAIQKVVSELLPKLES 468


>ref|XP_004146987.1| PREDICTED: 2-dehydro-3-deoxygluconokinase-like [Cucumis sativus]
            gi|449517273|ref|XP_004165670.1| PREDICTED:
            2-dehydro-3-deoxygluconokinase-like [Cucumis sativus]
          Length = 480

 Score =  483 bits (1243), Expect = e-134
 Identities = 237/393 (60%), Positives = 299/393 (76%), Gaps = 1/393 (0%)
 Frame = +3

Query: 288  KDADVATLGNLCXXXXXXXXXXXXXXFEERRAYMDKLSSLKPDKKYWEAGGNCNMVIAAA 467
            KD DVATLGNLC               +ERRAYM++LSS  P+K YWEAGGNCNM IAAA
Sbjct: 78   KDIDVATLGNLCVDIVLNVPSLPPENDDERRAYMERLSSSPPEKCYWEAGGNCNMAIAAA 137

Query: 468  RIGLSCLSLGHVGDEIYGRFLLDVLHDEGIGMVEMSEDTDANAGNAAYETLLCWVLVDPL 647
            R+GL C ++GHVG+EIYG+FLLDVLH+EGI  V MS+ +         ETLLCWVLVDPL
Sbjct: 138  RLGLCCATIGHVGNEIYGQFLLDVLHEEGISTVRMSDASCGVRSKTTCETLLCWVLVDPL 197

Query: 648  HRHGFCSRADFSKDPAFSWMSKLSGEVKSAIKRSKILFCNGYAFDELSPSLLVSALDYAI 827
             RHGFCSRADFSK+PAFSW+++LS  VK  ++RSK+LFCNGY FDELSP+L+ S +DYA+
Sbjct: 198  QRHGFCSRADFSKEPAFSWITQLSEGVKINVRRSKVLFCNGYGFDELSPNLITSIVDYAL 257

Query: 828  EVGTSIFFDPGPRGRTLNIGTADQRRALDKYLRMSDVLLLTSDEAESLTGITNPILAGQE 1007
            EVGTSIFFDPGPRG++L++GT D+R AL+ +LRMSD LLLTSDEAESLTGI +PILAG E
Sbjct: 258  EVGTSIFFDPGPRGKSLSVGTPDERSALNHFLRMSDALLLTSDEAESLTGIQDPILAGNE 317

Query: 1008 LLRKGMRAKWVIVKMGAKGSILITKSSVSAAPAFKVNVIDTVGCGDSFVAAIAFGFLHKM 1187
            LL+KG+R KWVIVKMG++GSILITK+S+S APAFKVNV+DTVGCGDSFVAAIA+G++H +
Sbjct: 318  LLKKGVRTKWVIVKMGSRGSILITKTSISCAPAFKVNVVDTVGCGDSFVAAIAYGYIHNL 377

Query: 1188 PTXXXXXXXXXXXXXXXXXCGAGRSVATLGKVIQLLKDSNLNDD-NFLSVFLDENSHIPE 1364
            PT                 CGAGRSVATL KV++L+  +N N+D +F +  L EN    +
Sbjct: 378  PTVDALTIANAVGAATAMGCGAGRSVATLEKVLELMMKANTNEDSDFWNKLLSENLESQD 437

Query: 1365 VILLSRASTYGSNGHLKHVSLKNVISELLSKLK 1463
            + L+ +++   +N  + ++ L+NV+S LL  L+
Sbjct: 438  ITLMLKSNVDRNNRSINYIMLQNVVSRLLPMLE 470


>ref|XP_003536926.1| PREDICTED: fructokinase-1-like [Glycine max]
          Length = 467

 Score =  471 bits (1213), Expect = e-130
 Identities = 240/398 (60%), Positives = 291/398 (73%), Gaps = 4/398 (1%)
 Frame = +3

Query: 282  IIKDADVATLGNLCXXXXXXXXXXXXXXFEERRAYMDKLSSLKPDKKYWEAGGNCNMVIA 461
            + K  DVATL NLC                +R+A+MD+L+   PDKKYWEAGGNCNM IA
Sbjct: 61   VAKHVDVATLSNLCVDIVLNVPQLPPPSPLQRKAFMDRLAQSPPDKKYWEAGGNCNMAIA 120

Query: 462  AARIGLSCLSLGHVGDEIYGRFLLDVLHDEGIGMVEMSEDTD---ANAGNAAYETLLCWV 632
            AAR+GL+C+S+GHVG+EIYG+FL DVLHDEGIG+V M  + D   ++  +A+ ETLLCWV
Sbjct: 121  AARLGLNCISIGHVGNEIYGKFLSDVLHDEGIGLVGMITNDDIVNSSGSSASCETLLCWV 180

Query: 633  LVDPLHRHGFCSRADFSKDPAFSWMSKLSGEVKSAIKRSKILFCNGYAFDELSPSLLVSA 812
            LVDPL RHGFCSRADF ++P   WMSKLS EVK AIK SK+LFCNGY FDELSP  ++SA
Sbjct: 181  LVDPLQRHGFCSRADFCEEPILHWMSKLSSEVKMAIKNSKVLFCNGYGFDELSPGAILSA 240

Query: 813  LDYAIEVGTSIFFDPGPRGRTLNIGTADQRRALDKYLRMSDVLLLTSDEAESLTGITNPI 992
            ++YA+EVGTSIFFDPGPRG++L+ GT D++RAL++ LRMSDVLLLTSDEAE LTGI +PI
Sbjct: 241  MEYAVEVGTSIFFDPGPRGKSLSTGTPDEQRALNQLLRMSDVLLLTSDEAEELTGIEDPI 300

Query: 993  LAGQELLRKGMRAKWVIVKMGAKGSILITKSSVSAAPAFKVNVIDTVGCGDSFVAAIAFG 1172
            LAGQE L++G+R KWVIVKMG+KGSILIT SSV+ APAFKVNVID+VGCGDSFVAAI +G
Sbjct: 301  LAGQEFLKRGIRTKWVIVKMGSKGSILITASSVACAPAFKVNVIDSVGCGDSFVAAIVYG 360

Query: 1173 FLHKMPTXXXXXXXXXXXXXXXXXCGAGRSVATLGKVIQLLKDSNLN-DDNFLSVFLDEN 1349
            F+H MP                  CGAGR+VATL  V+ +L+ SNLN DD F     ++N
Sbjct: 361  FIHNMPLVNTLAIANAVGAATAMGCGAGRNVATLENVVNILRSSNLNEDDEFWIEIFEKN 420

Query: 1350 SHIPEVILLSRASTYGSNGHLKHVSLKNVISELLSKLK 1463
                E+  LS     G+   L  VS   V SELL KL+
Sbjct: 421  VVAQEITYLSNVMN-GNKNRLNLVSFDKVASELLPKLE 457


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