BLASTX nr result

ID: Coptis23_contig00018275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018275
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332980.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]    95   5e-18
ref|XP_002334570.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002303885.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002869301.1| predicted protein [Arabidopsis lyrata subsp....    91   1e-16

>ref|XP_002332980.1| predicted protein [Populus trichocarpa] gi|222834311|gb|EEE72788.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
 Frame = -1

Query: 324 DELVSSILGDIATVSGLAAKCCIYRVHDNLRALKERTYSPHLVSIGPLHHG--NLKSMEK 151
           +EL +S+   +      +  CCIYRV + LR L E+ Y+P +VSIGPLHHG  NLK+ME 
Sbjct: 12  NELANSLREQLKIKKAFSQACCIYRVPERLRKLNEKAYTPRVVSIGPLHHGKENLKAMED 71

Query: 150 HKWLYLKSFLGPNPLMLVENYVQVFRGFEVDARRCYAETFSSLSSNEF 7
           HK +YL+ FL  N L+ VE+ V V +  E   R CYAET  SLS  +F
Sbjct: 72  HKIMYLQQFLEQNLLVSVEDLVYVIKENETALRDCYAETI-SLSRKDF 118


>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
 Frame = -1

Query: 318 LVSSILGDIATVSGLAAKCCIYRVHDNLRALKERTYSPHLVSIGPLHHG--NLKSMEKHK 145
           L +SI   +++++ L ++CCIYRV D LR + E  + P ++SIGP+HHG   L+ ME HK
Sbjct: 24  LAASINEKLSSLTSLPSQCCIYRVPDTLRRVNEEAFVPRILSIGPVHHGKKRLRDMEGHK 83

Query: 144 WLYLKSFLGPNPLMLVENYVQVFRGFEVDARRCYAETFSSLSSNEFV 4
           W YLK+ L   P  +VE YV+  R  E   R CYAE      S+EFV
Sbjct: 84  WQYLKALLQRKPGTMVERYVKAMRELEARTRGCYAEII-KFDSDEFV 129


>ref|XP_002334570.1| predicted protein [Populus trichocarpa] gi|222873184|gb|EEF10315.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/110 (42%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
 Frame = -1

Query: 324 DELVSSILGDIATVSGLAAKCCIYRVHDNLRALKERTYSPHLVSIGPLHHG--NLKSMEK 151
           ++L  S+ G ++ +   ++ C IYRV   LR L E+ Y+P ++SIGPLHHG   LK ME+
Sbjct: 23  EKLAFSVEGKLSILRPFSSNCSIYRVPKRLRELNEKAYTPQVISIGPLHHGKEELKGMEE 82

Query: 150 HKWLYLKSFLGPNPLMLVENYVQVFRGFEVDARRCYAETFSSLSSNEFVK 1
           HK LYL+ FL  + +  V++++      E   R CYAETF +LS+ EFV+
Sbjct: 83  HKRLYLREFLELSDVN-VKDFIAAIAEREARLRNCYAETFDNLSAEEFVE 131


>ref|XP_002303885.1| predicted protein [Populus trichocarpa] gi|222841317|gb|EEE78864.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
 Frame = -1

Query: 324 DELVSSILGDIATVSGLAAKCCIYRVHDNLRALKERTYSPHLVSIGPLHHG--NLKSMEK 151
           +E+ +S+   +      +  CCIYRV + LR L E+ Y+P  VSIGPLHHG  NLK+ME 
Sbjct: 12  NEIANSLREQLKIKKAFSRACCIYRVPERLRKLNEKAYTPRAVSIGPLHHGKENLKAMED 71

Query: 150 HKWLYLKSFLGPNPLMLVENYVQVFRGFEVDARRCYAETFSSLSSNEF 7
           HK +YL+ FLG N L+ +E+ + + +  E   R  YAET   LS  +F
Sbjct: 72  HKIMYLQQFLGHNSLVSLEDLINIIKENETKLRDSYAETI-DLSRKDF 118


>ref|XP_002869301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315137|gb|EFH45560.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 677

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 52/109 (47%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
 Frame = -1

Query: 324 DELVSSILGDIATVSGLAAKCCIYRVHDNLRALKERTYSPHLVSIGPLHHG--NLKSMEK 151
           D LV SI   +  +S L+ KCCIY+V + LR L    Y+P LVS GPLH G   L++ME 
Sbjct: 270 DALVDSIKAKLDFLSSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEELQAMED 329

Query: 150 HKWLYLKSFLGPNPLMLVENYVQVFRGFEVDARRCYAETFSSLSSNEFV 4
           HK+ YL+SF+ P     +E+ V+V R +E +AR CYAE    L+S+EFV
Sbjct: 330 HKYRYLQSFI-PRTNSSLEDLVRVARTWEQNARSCYAEDV-KLNSDEFV 376


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