BLASTX nr result

ID: Coptis23_contig00018274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018274
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   104   8e-21
ref|XP_002332980.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002869301.1| predicted protein [Arabidopsis lyrata subsp....    92   6e-17
ref|XP_002513461.1| conserved hypothetical protein [Ricinus comm...    92   6e-17
ref|XP_002303885.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  104 bits (259), Expect = 8e-21
 Identities = 46/88 (52%), Positives = 61/88 (69%)
 Frame = +2

Query: 2   LEIVAGLPSECCIYRVHNNLRALNEKAYVPHLVSVGPYHHGKGNLKSMEKYKWNYLKSFL 181
           L  +  LPS+CCIYRV + LR +NE+A+VP ++S+GP HHGK  L+ ME +KW YLK+ L
Sbjct: 32  LSSLTSLPSQCCIYRVPDTLRRVNEEAFVPRILSIGPVHHGKKRLRDMEGHKWQYLKALL 91

Query: 182 GPKPLMLVENYVQVFRDFEQDARRCYAE 265
             KP  +VE YV+  R+ E   R CYAE
Sbjct: 92  QRKPGTMVERYVKAMRELEARTRGCYAE 119


>ref|XP_002332980.1| predicted protein [Populus trichocarpa] gi|222834311|gb|EEE72788.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/91 (52%), Positives = 58/91 (63%)
 Frame = +2

Query: 2   LEIVAGLPSECCIYRVHNNLRALNEKAYVPHLVSVGPYHHGKGNLKSMEKYKWNYLKSFL 181
           L+I       CCIYRV   LR LNEKAY P +VS+GP HHGK NLK+ME +K  YL+ FL
Sbjct: 22  LKIKKAFSQACCIYRVPERLRKLNEKAYTPRVVSIGPLHHGKENLKAMEDHKIMYLQQFL 81

Query: 182 GPKPLMLVENYVQVFRDFEQDARRCYAETFS 274
               L+ VE+ V V ++ E   R CYAET S
Sbjct: 82  EQNLLVSVEDLVYVIKENETALRDCYAETIS 112


>ref|XP_002869301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315137|gb|EFH45560.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 677

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/88 (50%), Positives = 62/88 (70%)
 Frame = +2

Query: 2   LEIVAGLPSECCIYRVHNNLRALNEKAYVPHLVSVGPYHHGKGNLKSMEKYKWNYLKSFL 181
           L+ ++ L ++CCIY+V N LR LN  AY P LVS GP H GK  L++ME +K+ YL+SF+
Sbjct: 280 LDFLSSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEELQAMEDHKYRYLQSFI 339

Query: 182 GPKPLMLVENYVQVFRDFEQDARRCYAE 265
            P+    +E+ V+V R +EQ+AR CYAE
Sbjct: 340 -PRTNSSLEDLVRVARTWEQNARSCYAE 366


>ref|XP_002513461.1| conserved hypothetical protein [Ricinus communis]
           gi|223547369|gb|EEF48864.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/89 (49%), Positives = 58/89 (65%)
 Frame = +2

Query: 2   LEIVAGLPSECCIYRVHNNLRALNEKAYVPHLVSVGPYHHGKGNLKSMEKYKWNYLKSFL 181
           +EI+  L  ECCIYRV   LR +NEKAY P +VS+GPYHHGK  LK+ME+YK  YL  FL
Sbjct: 34  IEILDPLSDECCIYRVPQQLREINEKAYTPRVVSIGPYHHGKNELKAMEEYKRRYLVDFL 93

Query: 182 GPKPLMLVENYVQVFRDFEQDARRCYAET 268
               +M  + ++   ++ E+  R  YAET
Sbjct: 94  ERSEIMF-DIFITGIQEMEKRLRNSYAET 121


>ref|XP_002303885.1| predicted protein [Populus trichocarpa] gi|222841317|gb|EEE78864.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/89 (49%), Positives = 56/89 (62%)
 Frame = +2

Query: 2   LEIVAGLPSECCIYRVHNNLRALNEKAYVPHLVSVGPYHHGKGNLKSMEKYKWNYLKSFL 181
           L+I       CCIYRV   LR LNEKAY P  VS+GP HHGK NLK+ME +K  YL+ FL
Sbjct: 22  LKIKKAFSRACCIYRVPERLRKLNEKAYTPRAVSIGPLHHGKENLKAMEDHKIMYLQQFL 81

Query: 182 GPKPLMLVENYVQVFRDFEQDARRCYAET 268
           G   L+ +E+ + + ++ E   R  YAET
Sbjct: 82  GHNSLVSLEDLINIIKENETKLRDSYAET 110


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