BLASTX nr result

ID: Coptis23_contig00018264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018264
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002339778.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_002333907.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21

>ref|XP_002339778.1| predicted protein [Populus trichocarpa] gi|222832218|gb|EEE70695.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/115 (53%), Positives = 79/115 (68%)
 Frame = -1

Query: 369 LGRNPASLFLAMYLKQCSACLQRAYAGDKAAPSLLPVPVSLTRSGFPRIIPAFHRQMIRR 190
           L R    LF A+YLKQC+  LQ+AYAG      LLPVPVSLTRSG+P IIP FHR+MIRR
Sbjct: 10  LNRKSGPLFTALYLKQCAGSLQQAYAGVAQPHGLLPVPVSLTRSGYPTIIPEFHRKMIRR 69

Query: 189 KDDKADALVQIYLSFFTLSKVIELAKPVSRSTFQSISDPIDDLDRAAEFVYSMKH 25
           KD+KAD LV+IYLS+F++ + I LAK + RS  +SI  P    D+  + +  + H
Sbjct: 70  KDEKADQLVKIYLSYFSVCRSIRLAKRLDRSILESIVSPSQVTDQWRDRIIDIVH 124


>ref|XP_002333907.1| predicted protein [Populus trichocarpa] gi|222838895|gb|EEE77246.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/99 (53%), Positives = 69/99 (69%)
 Frame = -1

Query: 321 CSACLQRAYAGDKAAPSLLPVPVSLTRSGFPRIIPAFHRQMIRRKDDKADALVQIYLSFF 142
           C+  LQ+AYAG      LLPVPVSLTRSG+P IIP FHR+MIRRKD+KAD LV+IYLS+F
Sbjct: 30  CAGSLQQAYAGVAQPHGLLPVPVSLTRSGYPTIIPEFHRKMIRRKDEKADQLVKIYLSYF 89

Query: 141 TLSKVIELAKPVSRSTFQSISDPIDDLDRAAEFVYSMKH 25
           ++ + I LAK + RS  +SI  P    D+  + +  + H
Sbjct: 90  SVCRSIRLAKRLDRSILESIVSPSQVTDQWRDRIIDIVH 128



 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/99 (53%), Positives = 69/99 (69%)
 Frame = -1

Query: 321 CSACLQRAYAGDKAAPSLLPVPVSLTRSGFPRIIPAFHRQMIRRKDDKADALVQIYLSFF 142
           C+  LQ+AYAG      LLPVPVSLTRSG+P IIP FHR+MIRRKD+KAD LV+IYLS+F
Sbjct: 218 CAGSLQQAYAGVAQPHGLLPVPVSLTRSGYPTIIPEFHRKMIRRKDEKADQLVKIYLSYF 277

Query: 141 TLSKVIELAKPVSRSTFQSISDPIDDLDRAAEFVYSMKH 25
           ++ + I LAK + RS  +SI  P    D+  + +  + H
Sbjct: 278 SVCRSIRLAKRLDRSILESIVSPSQVTDQWRDRIIDIVH 316


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