BLASTX nr result

ID: Coptis23_contig00018259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018259
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330733.1| predicted protein [Populus trichocarpa] gi|2...   155   5e-58
gb|ABK93460.1| unknown [Populus trichocarpa]                          151   5e-57
ref|NP_001240208.1| uncharacterized protein LOC100807276 [Glycin...   154   7e-57
ref|XP_002443519.1| hypothetical protein SORBIDRAFT_08g020870 [S...   147   4e-54
ref|XP_004143768.1| PREDICTED: histidine biosynthesis bifunction...   158   1e-53

>ref|XP_002330733.1| predicted protein [Populus trichocarpa] gi|222872509|gb|EEF09640.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  155 bits (391), Expect(2) = 5e-58
 Identities = 79/114 (69%), Positives = 94/114 (82%)
 Frame = +2

Query: 161 VKENTLALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIREEADELCRT 340
           V  N LALTTLYSLE+ ISQR+AEL   + GKPSWTKRLLLD  LLC+KIREEADELCRT
Sbjct: 172 VDGNKLALTTLYSLETIISQRKAELALPQTGKPSWTKRLLLDHDLLCTKIREEADELCRT 231

Query: 341 LEENENKSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKNSR 502
           LE+NE+++R A E  DVL+H+MVL+  K V +EEVL+VLR+RF +SGIEEK SR
Sbjct: 232 LEDNEDQARTADEMGDVLYHAMVLMAVKGVKIEEVLEVLRKRFFQSGIEEKRSR 285



 Score = 96.7 bits (239), Expect(2) = 5e-58
 Identities = 43/52 (82%), Positives = 46/52 (88%)
 Frame = +1

Query: 1   SKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSVNDYLKGSEVD 156
           SKNFINV DI+LDCDRDSIIYLGKPDGPTCHTGSETCYY SV D L+  +VD
Sbjct: 122 SKNFINVHDIYLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVPDLLENKQVD 173


>gb|ABK93460.1| unknown [Populus trichocarpa]
          Length = 200

 Score =  151 bits (382), Expect(2) = 5e-57
 Identities = 78/114 (68%), Positives = 93/114 (81%)
 Frame = +2

Query: 161 VKENTLALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIREEADELCRT 340
           V  N LALTTLYSLE+ IS+R+AEL   + GKPSWTKRLLLD  LLC KIREEADELCRT
Sbjct: 86  VDGNKLALTTLYSLETIISERKAELALPQIGKPSWTKRLLLDHDLLCLKIREEADELCRT 145

Query: 341 LEENENKSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKNSR 502
           LE+NE+++R A E  DVL+H+MVL+  K V +EEVL+VLR+RF +SGIEEK SR
Sbjct: 146 LEDNEDQARTADEMGDVLYHAMVLMAVKGVKIEEVLEVLRKRFFQSGIEEKRSR 199



 Score = 96.7 bits (239), Expect(2) = 5e-57
 Identities = 43/52 (82%), Positives = 46/52 (88%)
 Frame = +1

Query: 1   SKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSVNDYLKGSEVD 156
           SKNFINV DI+LDCDRDSIIYLGKPDGPTCHTGSETCYY SV D L+  +VD
Sbjct: 36  SKNFINVHDIYLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVPDLLENKQVD 87


>ref|NP_001240208.1| uncharacterized protein LOC100807276 [Glycine max]
           gi|255641260|gb|ACU20907.1| unknown [Glycine max]
          Length = 281

 Score =  154 bits (390), Expect(2) = 7e-57
 Identities = 81/113 (71%), Positives = 96/113 (84%)
 Frame = +2

Query: 164 KENTLALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIREEADELCRTL 343
           +EN LALT+LY+LESTISQR+ EL   EN KPSWTKRLLL+ KLLCSKIREEA+ELC+TL
Sbjct: 162 EENKLALTSLYALESTISQRKTELIG-ENEKPSWTKRLLLNDKLLCSKIREEANELCQTL 220

Query: 344 EENENKSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKNSR 502
           E NE++ R A+E ADVL+H+MVLL  K V +E+VLQVLR RFS+SGIEEK SR
Sbjct: 221 ENNEDEKRTASEMADVLYHAMVLLAKKGVKIEDVLQVLRLRFSQSGIEEKKSR 273



 Score = 93.2 bits (230), Expect(2) = 7e-57
 Identities = 41/55 (74%), Positives = 46/55 (83%)
 Frame = +1

Query: 1   SKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSVNDYLKGSEVDKCK 165
           S NFINV D+F+DCDRDSIIYLGKPDGPTCHTG+ETCYY SV D LK  E ++ K
Sbjct: 111 SNNFINVHDVFIDCDRDSIIYLGKPDGPTCHTGAETCYYTSVFDLLKQQEAEENK 165


>ref|XP_002443519.1| hypothetical protein SORBIDRAFT_08g020870 [Sorghum bicolor]
           gi|241944212|gb|EES17357.1| hypothetical protein
           SORBIDRAFT_08g020870 [Sorghum bicolor]
          Length = 306

 Score =  147 bits (371), Expect(2) = 4e-54
 Identities = 76/112 (67%), Positives = 93/112 (83%)
 Frame = +2

Query: 167 ENTLALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIREEADELCRTLE 346
           E    +TTLYSLE TIS+RQ E+     GKPSWTK+LLLD +LLCSKIREEA EL +TL 
Sbjct: 192 EGRQVVTTLYSLEDTISRRQEEIVTEGGGKPSWTKKLLLDNQLLCSKIREEAGELIQTLL 251

Query: 347 ENENKSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKNSR 502
           ENE++SRAA+E AD+L+H+MVLL+ KDV +EEVL+VLR+RFS+SGIEEK SR
Sbjct: 252 ENEDQSRAASEMADLLYHAMVLLRVKDVKMEEVLEVLRKRFSQSGIEEKASR 303



 Score = 91.3 bits (225), Expect(2) = 4e-54
 Identities = 41/50 (82%), Positives = 44/50 (88%)
 Frame = +1

Query: 1   SKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSVNDYLKGSE 150
           S NFINV DIFLDCDRDSIIYLGKPDGPTCHTG+ETCYY SV D L+ S+
Sbjct: 140 SMNFINVHDIFLDCDRDSIIYLGKPDGPTCHTGAETCYYTSVYDALQSSK 189


>ref|XP_004143768.1| PREDICTED: histidine biosynthesis bifunctional protein hisIE,
           chloroplastic-like [Cucumis sativus]
          Length = 282

 Score =  158 bits (399), Expect(2) = 1e-53
 Identities = 78/112 (69%), Positives = 98/112 (87%)
 Frame = +2

Query: 167 ENTLALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIREEADELCRTLE 346
           ++ LAL+TLYSLE+ ISQR+AEL +++ GKPSWTKRLLL+ KLLCSKIREEADELCRT+E
Sbjct: 164 KSKLALSTLYSLENIISQRKAELASLQTGKPSWTKRLLLENKLLCSKIREEADELCRTME 223

Query: 347 ENENKSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKNSR 502
           ENE+KSR A+EAADV++H +V L  K+V  EEVL+ LR+RFS+SGIEEK +R
Sbjct: 224 ENEDKSRTASEAADVVYHILVSLAVKEVKFEEVLEHLRERFSQSGIEEKKNR 275



 Score = 79.0 bits (193), Expect(2) = 1e-53
 Identities = 34/55 (61%), Positives = 41/55 (74%)
 Frame = +1

Query: 1   SKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSVNDYLKGSEVDKCK 165
           S NFIN+ DI LDCDRDSIIYLGKP GP CHTG+ TC+Y S++D +   +  K K
Sbjct: 112 SNNFINIHDISLDCDRDSIIYLGKPVGPACHTGTATCFYTSLDDLIDDPQAGKSK 166


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