BLASTX nr result

ID: Coptis23_contig00018252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018252
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72053.1| hypothetical protein VITISV_031314 [Vitis vinifera]    76   4e-12
emb|CAN76132.1| hypothetical protein VITISV_022809 [Vitis vinifera]    74   1e-11
emb|CAN80672.1| hypothetical protein VITISV_002979 [Vitis vinifera]    74   2e-11
emb|CAN75646.1| hypothetical protein VITISV_031269 [Vitis vinifera]    74   2e-11
emb|CAN70844.1| hypothetical protein VITISV_007637 [Vitis vinifera]    74   2e-11

>emb|CAN72053.1| hypothetical protein VITISV_031314 [Vitis vinifera]
          Length = 780

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
 Frame = +2

Query: 11  GPKPFRFHDMWSKDVSCEGVIENCW-SHPSWGSPSFILNSKFKFLRTSFRTWNREVFGNI 187
           GP PFRF +MW K+   + ++ + W    S G+ SF L+ K K L+ S + WNREVFGN+
Sbjct: 142 GPSPFRFENMWLKEEDFKDLLRSWWMGFQSRGTFSFTLSQKLKALKASLKIWNREVFGNV 201

Query: 188 FTQIKESETKLTSLISEPVTDVNLLEIKEMRKNIMDLYQK----EQLYWKHISHSASVLD 355
             +   +  ++    S  +  V   E + +RK  ++ Y+K    E+  W+  S    + +
Sbjct: 202 TVRKDSALKEMMFWDSIEMDRVLSAEEQNLRKQALEEYKKLVIMEETSWRQKSRELWLRE 261

Query: 356 ADNNTKXXXXXXXXXXXXNGIDKIQRRDDTWLTSRQTIATEFLTSFEDI 502
            D NT             N + KI + + +W+T  + I    + +F  +
Sbjct: 262 GDRNTGFFHKMANAHKRVNSLVKI-KINGSWVTEERDIKDGLVQAFHSL 309


>emb|CAN76132.1| hypothetical protein VITISV_022809 [Vitis vinifera]
          Length = 2404

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 5/171 (2%)
 Frame = +2

Query: 2    VDSGPKPFRFHDMWSKDVSCEGVIENCWSHPSW-GSPSFILNSKFKFLRTSFRTWNREVF 178
            V  GP PFRF +MW K+   + +++  W   S+ GS SFIL  KFK L+   ++WN++VF
Sbjct: 1394 VRRGPVPFRFENMWLKEEGFKDLLKRWWQRLSFNGSFSFILAEKFKALKAILKSWNKDVF 1453

Query: 179  GNIFTQIKESETKLTSLISEPVTDVNLLEIKEMRKNIMDLYQK----EQLYWKHISHSAS 346
            G +    K +  K+     +       LE  E RK     ++K    E++ W+  S    
Sbjct: 1454 GQVGVNKKLALDKVNFWDGQEKLRPLSLEELEARKVAKGDFEKWALMEEVSWRQKSREVW 1513

Query: 347  VLDADNNTKXXXXXXXXXXXXNGIDKIQRRDDTWLTSRQTIATEFLTSFED 499
            + + D NT             N + KI + D  WLT    I    + +F+D
Sbjct: 1514 LREGDRNTGFFHKMANSHRRRNCLSKI-KVDGXWLTEEXEIKRGVVRAFKD 1563


>emb|CAN80672.1| hypothetical protein VITISV_002979 [Vitis vinifera]
          Length = 1102

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 7/171 (4%)
 Frame = +2

Query: 11   GPKPFRFHDMWSKDVSCEGVIENCWSHPSW-GSPSFILNSKFKFLRTSFRTWNREVFGNI 187
            GP PFRF +MW K+     +I N W   ++ GS SF L+ K K L+   + WNREVFGN+
Sbjct: 818  GPSPFRFENMWLKEEGFRDLIRNWWVGFNFRGSYSFXLSEKLKALKACLKVWNREVFGNV 877

Query: 188  FTQIKESETKLTSLISEPVTDVNLLEIKEM--RKNIMDLYQK----EQLYWKHISHSASV 349
              + KES  K   ++ + +    +L  +E   RK  ++ Y+K    E+  W+  S    +
Sbjct: 878  NAR-KESALK-QMMLWDAIEGDRVLNTEEQNSRKKALEEYEKWVIMEETAWRQKSRELWL 935

Query: 350  LDADNNTKXXXXXXXXXXXXNGIDKIQRRDDTWLTSRQTIATEFLTSFEDI 502
             + D NT             N + KI + + TW++    I    + +F  +
Sbjct: 936  REGDXNTGYFHKMANAHRRVNSMVKI-KINGTWVSEESDIKEGVVQAFHXL 985


>emb|CAN75646.1| hypothetical protein VITISV_031269 [Vitis vinifera]
          Length = 1701

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 5/171 (2%)
 Frame = +2

Query: 2    VDSGPKPFRFHDMWSKDVSCEGVIENCWSHPSW-GSPSFILNSKFKFLRTSFRTWNREVF 178
            V  GP PFRF +MW K+   + +++  W   S+ GS SFIL  K K L+   + WN++VF
Sbjct: 722  VRRGPAPFRFENMWLKEEGFKDLLKGWWQGLSFNGSFSFILAEKLKALKAILKLWNKDVF 781

Query: 179  GNIFTQIKESETKLTSLISEPVTDVNLLEIKEMRKNIMDLYQK----EQLYWKHISHSAS 346
            G +    K +  K+     +       LE  E RK     ++K    E++ W+  S    
Sbjct: 782  GQVDVNKKVALDKVNFWDGQEKIRPLSLEELEARKVAKGDFEKWALMEEVSWRQKSREVW 841

Query: 347  VLDADNNTKXXXXXXXXXXXXNGIDKIQRRDDTWLTSRQTIATEFLTSFED 499
            + + D NT             N + KI + D  WLT  Q I    + +F+D
Sbjct: 842  LREGDRNTGFFHKMANSHRRRNCLSKI-KVDGVWLTEEQEIKRGVVRAFKD 891


>emb|CAN70844.1| hypothetical protein VITISV_007637 [Vitis vinifera]
          Length = 1676

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
 Frame = +2

Query: 11   GPKPFRFHDMWSKDVSCEGVIENCWSHPSW-GSPSFILNSKFKFLRTSFRTWNREVFGNI 187
            GP PFRF +MW K    + V+   W      GS SFIL  K K L+   R+WN+EVFG I
Sbjct: 783  GPTPFRFENMWLKSEGFKEVMRQWWEGIQVNGSASFILTEKLKALKPLLRSWNKEVFGQI 842

Query: 188  FTQIKESETKLTSLISEPVTDVNLLEIKEMRKNIMDLYQK----EQLYWKHISHSASVLD 355
              + +++   +     E +     +E +E+RK   +LY+K    E++ W+  S    + +
Sbjct: 843  DLEKQKAWNLIEYWDKEEMVRFLSIEEEEVRKEARELYKKWALLEEVSWRQKSREIWLKE 902

Query: 356  ADNNTK 373
             D NTK
Sbjct: 903  GDRNTK 908


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