BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018246
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul...   100   9e-20
ref|NP_001030886.1| F-box/LRR-repeat protein [Arabidopsis thalia...    98   6e-19
ref|NP_001190131.1| F-box/LRR-repeat protein [Arabidopsis thalia...    98   6e-19
emb|CAB88307.1| putative protein [Arabidopsis thaliana]                98   6e-19
ref|NP_567075.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    98   6e-19

>ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score =  100 bits (250), Expect = 9e-20
 Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 2/122 (1%)
 Frame = -2

Query: 415 ELSEEQSVNEGKDRFSNLPNTLMQYILSFIPTKDAVATSILSTRWKYLWTSLPNLIFDD- 239
           +LS+ Q  N+G+D  SNLP+ ++  +LSF+PTKDAV+TS+LS RW YLWT +  L FDD 
Sbjct: 15  KLSKRQKSNKGQDLISNLPDHIIGCVLSFLPTKDAVSTSVLSKRWIYLWTFITKLDFDDI 74

Query: 238 GIADEDPVEKKKFMDFVDRVLNLHDESNIKTLSITCKDP-DESRIQAWLSAALQHKVQEL 62
           G    + + K  F+DFVDRVL   +  +I++ S+   +  D S I  W+S  +  +V++L
Sbjct: 75  GYCSSNEIRKACFVDFVDRVLLRLNSEHIRSFSLKMSEKYDSSYINKWISIVINLRVRKL 134

Query: 61  NL 56
            +
Sbjct: 135 RV 136


>ref|NP_001030886.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332646326|gb|AEE79847.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 314

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 8/125 (6%)
 Frame = -2

Query: 379 DRFSNLPNTLMQYILSFIPTKDAVATSILSTRWKYLWTSLPNLIFDDGI---ADEDPVEK 209
           D FS+LPN L+ +ILSF+ TK+A  TS+LS RW+ L+  +P L FDD +    +E   EK
Sbjct: 2   DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61

Query: 208 ----KKFMDFVDRVLNLHDESNIKTLSITCK-DPDESRIQAWLSAALQHKVQELNLDVNV 44
               + FMDFVDRVL+LH +S IKT S+ CK   D   +  W+   L   V +L+L ++ 
Sbjct: 62  EGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFIDF 121

Query: 43  KDCLS 29
           +D  S
Sbjct: 122 RDLYS 126


>ref|NP_001190131.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332646327|gb|AEE79848.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 465

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 8/125 (6%)
 Frame = -2

Query: 379 DRFSNLPNTLMQYILSFIPTKDAVATSILSTRWKYLWTSLPNLIFDDGI---ADEDPVEK 209
           D FS+LPN L+ +ILSF+ TK+A  TS+LS RW+ L+  +P L FDD +    +E   EK
Sbjct: 2   DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61

Query: 208 ----KKFMDFVDRVLNLHDESNIKTLSITCK-DPDESRIQAWLSAALQHKVQELNLDVNV 44
               + FMDFVDRVL+LH +S IKT S+ CK   D   +  W+   L   V +L+L ++ 
Sbjct: 62  EGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFIDF 121

Query: 43  KDCLS 29
           +D  S
Sbjct: 122 RDLYS 126


>emb|CAB88307.1| putative protein [Arabidopsis thaliana]
          Length = 517

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 8/125 (6%)
 Frame = -2

Query: 379 DRFSNLPNTLMQYILSFIPTKDAVATSILSTRWKYLWTSLPNLIFDDGI---ADEDPVEK 209
           D FS+LPN L+ +ILSF+ TK+A  TS+LS RW+ L+  +P L FDD +    +E   EK
Sbjct: 2   DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61

Query: 208 ----KKFMDFVDRVLNLHDESNIKTLSITCK-DPDESRIQAWLSAALQHKVQELNLDVNV 44
               + FMDFVDRVL+LH +S IKT S+ CK   D   +  W+   L   V +L+L ++ 
Sbjct: 62  EGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFIDF 121

Query: 43  KDCLS 29
           +D  S
Sbjct: 122 RDLYS 126


>ref|NP_567075.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|79315560|ref|NP_001030885.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
           gi|75249486|sp|Q93ZX6.1|FBL57_ARATH RecName:
           Full=F-box/LRR-repeat protein At3g58900
           gi|15810329|gb|AAL07052.1| unknown protein [Arabidopsis
           thaliana] gi|20259237|gb|AAM14334.1| unknown protein
           [Arabidopsis thaliana] gi|227206246|dbj|BAH57178.1|
           AT3G58900 [Arabidopsis thaliana]
           gi|332646324|gb|AEE79845.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana] gi|332646325|gb|AEE79846.1|
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 327

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 8/125 (6%)
 Frame = -2

Query: 379 DRFSNLPNTLMQYILSFIPTKDAVATSILSTRWKYLWTSLPNLIFDDGI---ADEDPVEK 209
           D FS+LPN L+ +ILSF+ TK+A  TS+LS RW+ L+  +P L FDD +    +E   EK
Sbjct: 2   DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61

Query: 208 ----KKFMDFVDRVLNLHDESNIKTLSITCK-DPDESRIQAWLSAALQHKVQELNLDVNV 44
               + FMDFVDRVL+LH +S IKT S+ CK   D   +  W+   L   V +L+L ++ 
Sbjct: 62  EGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFIDF 121

Query: 43  KDCLS 29
           +D  S
Sbjct: 122 RDLYS 126