BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018239
         (1807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32913.3| unnamed protein product [Vitis vinifera]               80   2e-12
ref|XP_002319944.1| f-box family protein [Populus trichocarpa] g...    78   9e-12
ref|XP_002276216.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    75   6e-11
ref|NP_173374.1| FBD / Leucine Rich Repeat domains containing pr...    72   5e-10
ref|XP_002522710.1| conserved hypothetical protein [Ricinus comm...    70   1e-09

>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 77/251 (30%), Positives = 114/251 (45%), Gaps = 26/251 (10%)
 Frame = -1

Query: 1594 QSEDIISNLNEDVILYILSFLDIKAAVVTXXXXXXXXXXXXXXRVLNFDQRFYPWFKKYP 1415
            +S DIISNL ++++ +ILSFL  K AV T               +L+FD     W     
Sbjct: 7    ESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDEL--WLNPST 64

Query: 1414 FKNSLDKVI-------NVLRNVQEIHLK-------------LSSELPQCIFNWKSLRVLK 1295
                 +++I        VLR+ +   +K                ELP   F  K+L V+K
Sbjct: 65   LVELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDNWGVELPPMFFICKTLVVVK 124

Query: 1294 LKGVDGFLWLRNPHSVDLPLLKSLHLTRV-VLDMTLVNDCLSKCPALEVLSLKCCEFMHL 1118
            L      L+L  P +V LP LK+LHL  V   D   +   LS CP LE L ++  E  + 
Sbjct: 125  LSCA---LFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQ 181

Query: 1117 EDLIVSSPQLKKLVIITYDQNYGC-----FKHYDTKIWAPKLTFLKVRDYISKRFSLDNL 953
              + VS+P LK L I  +   +        + Y   + AP L +L + DY+SK + + +L
Sbjct: 182  WVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDL 241

Query: 952  SSLESAVIDLK 920
             SL  A ID++
Sbjct: 242  PSLVKAFIDVE 252


>ref|XP_002319944.1| f-box family protein [Populus trichocarpa]
            gi|222858320|gb|EEE95867.1| f-box family protein [Populus
            trichocarpa]
          Length = 511

 Score = 77.8 bits (190), Expect = 9e-12
 Identities = 97/348 (27%), Positives = 159/348 (45%), Gaps = 30/348 (8%)
 Frame = -1

Query: 1375 NVQEIHLKLSS----ELPQCIFNWKSLRVLKLKG-VDGFLWLRNP-HSVDLPLLKSLHLT 1214
            NVQE+ +++++      P+ +   +SLRVLKL+    GF  L +   ++  P L +L L+
Sbjct: 133  NVQELDVEVATGDYFNFPRGVITSESLRVLKLRSRYPGFRLLPSSVMTIGFPSLHTLSLS 192

Query: 1213 RVVL-DMTLVNDCL--SKCPALEVLSLKCCEFMH--------LEDLIVSSP-QLKKLVII 1070
             V+L + + + D    S  P L+ L+L  C  M         LEDL + +  QL  L I 
Sbjct: 193  LVILYEQSSLLDLFTESSFPCLKNLNLDACFGMKHLKVCCRALEDLTIENCFQLHSLDIC 252

Query: 1069 TYDQNY----GCFKHYDTKIW----APKLTFLKVR-DYISKRFSLDNLSSLESAVIDLKV 917
            +          CF  Y  K W    AP+L  +    + I+   SL NL+SL  A +   +
Sbjct: 253  SAKLENLRVASCFDAYSDKTWFKVNAPRLRGISWEYNSITASSSLVNLTSLHEASVGFSL 312

Query: 916  NEHFVPLGTKQENAKRVIQVLEGLCRXXXXXXXXXXXEMFSSALKIQRMSSQFSNLRHFK 737
                + +    E  + V   L GL             E+ S+   I  +   F+NL+  +
Sbjct: 313  LHENLSV----EKLQSVCNFLSGLSHVHSLTLDSQCVEILSNKNDIINLLHPFNNLKVLE 368

Query: 736  LTSS--PNDACDVLQLLMNSPNIKTLLLKMTWTNFNSYQGRLYWDEPSFYSTIMEANWEE 563
            L +    N+   +  L  +SP + TL+LK+   +F + + +   D     ++  E  WE 
Sbjct: 369  LHTGFEKNNVPGLAFLFRSSPTLHTLILKII-NDFKTERRQWNRDLWDLSTSAEEQYWES 427

Query: 562  WLQ-FQCLLEHLESVEIRNFLGCENEVRLLIVLLQKATALRKIKIVLA 422
             LQ  +  L+HL+ V+I  FL CENEV L   LL+    L+++ +  A
Sbjct: 428  QLQALRPFLDHLKVVKIHGFLECENEVSLAKFLLKHGKDLQEMTLCTA 475


>ref|XP_002276216.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220-like
            [Vitis vinifera]
          Length = 513

 Score = 75.1 bits (183), Expect = 6e-11
 Identities = 94/359 (26%), Positives = 161/359 (44%), Gaps = 43/359 (11%)
 Frame = -1

Query: 1384 VLRNVQEIHLKLSSE----LPQCIFNWKSLRVLKLK-GVDGFLWLRNPHSVDL----PLL 1232
            +  NVQ++ + + ++    LP+C+   +SL+ L LK    GF   R P S+ +      L
Sbjct: 134  IRHNVQDLDIDVCTDDYFNLPRCVVMSESLKALSLKFRPPGF---RLPPSMVMRGGFQSL 190

Query: 1231 KSLHLTRVV-------LDM-------TLVNDCLSKCPALEVLSLKCCEFM--------HL 1118
            ++L L+ +V       LD+        L    L  C  ++ L + C             L
Sbjct: 191  QTLSLSHMVFYKKHYLLDLFAGSAFPVLRKLTLDSCRGIKFLDVGCRVLQDLTVENCFQL 250

Query: 1117 EDLIVSSPQLKKLVIITYDQNYGCFKHYDTKIW----APKLTFLK-VRDYISKRFSLDNL 953
              L VS P+L++L +++      CF+    K W    AP+L  +    + I++   L+NL
Sbjct: 251  HGLTVSGPRLERLRVVS------CFESSSEKSWVKIIAPRLRVMHWEHNAITETSCLENL 304

Query: 952  SSLESAVIDLKVNEHFVPLGTKQENAKRVIQVLEGLCRXXXXXXXXXXXEMFSSALKIQR 773
            +S+E A I     +      T+ E  K V  +L GL             ++ S+      
Sbjct: 305  ASMEEAFIGFFALDE----DTRAEKYKSVSNILSGLSHAHCLTLQSQCIQILSNNHYSTI 360

Query: 772  MSSQFSNLRHFKLTS--SPNDACDVLQLLMNSPNIKTLLLKMTWTNFNSYQGRLY----W 611
                F NL+  KL +    N+   +L L  +SP + TL+LK+  T+F + + + +    W
Sbjct: 361  SLHPFHNLKTMKLHTVLDKNNIRGLLCLFRSSPTLHTLILKII-THFKAEKTKAWNKALW 419

Query: 610  DEPSFYSTIMEANWEEWLQ-FQCLLEHLESVEIRNFLGCENEVRLLIVLLQKATALRKI 437
            D  S  S+  E  WE   Q F+  L+HL+ V +   +  ENE+ L+  LL+   AL+++
Sbjct: 420  DHMS--SSEQEQYWESRSQTFKSFLQHLKVVRMEGLVESENEIGLIKFLLKHGMALQEM 476


>ref|NP_173374.1| FBD / Leucine Rich Repeat domains containing protein [Arabidopsis
            thaliana] gi|332191729|gb|AEE29850.1| FBD / Leucine Rich
            Repeat domains containing protein [Arabidopsis thaliana]
          Length = 435

 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 9/227 (3%)
 Frame = -1

Query: 1312 SLRVLKLKGV----DGFLWLRNPHSVDLPLLKSLHLTRVV-LDMTLVNDCLSKCPALEVL 1148
            SL+ L L+GV    + F  L   H+V  P LKSLHL  V+  D   +   L+ CP LE L
Sbjct: 125  SLKNLLLQGVRYVDESFQLLDESHTVCFPSLKSLHLKEVISSDERYLRSLLANCPVLEEL 184

Query: 1147 SLKCCEFMHLEDLIVSSPQLKKLVI-ITYDQNYGCFKHYDTKIWAPKLTFLKVRDYISKR 971
             ++  E+  L  + +  P LK L + I  D++         +I AP L ++K+ D+   +
Sbjct: 185  VMELDEYDTLGAVHIIVPSLKSLSLDIDCDRSSNV-----VEIVAPSLEYIKLNDHSDNK 239

Query: 970  FSLDNLSSLESAVIDLKVNEH--FVPLGTKQENAKRVIQVLEGLCRXXXXXXXXXXXEMF 797
            F ++N+  LE A ID  + E+  F+   T  +  +    ++ G  R              
Sbjct: 240  FLIENMPKLEEAYIDANIFEYEKFLGAFTSVKRLRASPSIVSG--RISGDGLNLCLMLQR 297

Query: 796  SSALKIQRMSSQFSNLRHFKL-TSSPNDACDVLQLLMNSPNIKTLLL 659
            S A  +  +   F+ L   K+ T  P  +  +L+LL  SPN+K L L
Sbjct: 298  SEARNVSAIC--FNQLESLKICTCKPYWSIILLRLLKGSPNLKVLEL 342


>ref|XP_002522710.1| conserved hypothetical protein [Ricinus communis]
            gi|223538060|gb|EEF39672.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 501

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 100/359 (27%), Positives = 157/359 (43%), Gaps = 37/359 (10%)
 Frame = -1

Query: 1384 VLRNVQEIHLKLSSE----LPQCIFNWKSLRVLKLKGV-DGFLWLRNPHSVD-LPLLKSL 1223
            +  NVQE+ +++++E     P+ +   K+LRVLKLK +  GF  L +    D    L+ L
Sbjct: 140  IRHNVQELDVEVATEDHFNFPRGVITSKTLRVLKLKSMYPGFRLLPSSVMTDGFRSLQVL 199

Query: 1222 HLTRVVL-DMTLVNDCL--SKCPALEVLSLKCCEFMHLEDLIVSSPQLKKLVIITYDQNY 1052
             L+ V+L D + + D    S  P L+ L+L  C    L+ L +S   L+ L +    Q +
Sbjct: 200  SLSLVILYDQSSLLDLFTESSFPRLKKLNLDAC--FGLKHLKISCRGLEDLTLENCFQLH 257

Query: 1051 G---------------CFKHYDTKIWAPKLTFLKVR------DYISKRFSLDNLSSLESA 935
            G               CF  Y  K W  K+    +R      + I+   SL+NL+SL  A
Sbjct: 258  GLEICCGKLDKLRVASCFDAYYEKSWV-KINSPNLRIVFWECNAITGTSSLENLTSLREA 316

Query: 934  VIDLKVNEHFVPLGTKQENAKRVIQVLEGLCRXXXXXXXXXXXEMFSSALKIQRMSSQFS 755
             +   +    V      E  + V  +L GL                S+A  +   S   S
Sbjct: 317  SVGFFLLHEDV----SAEKLQSVWDLLSGL----------------SNAYSLTLESDVLS 356

Query: 754  NLRHFKLTSSPN--DACDVLQLLMNSPNIKTLLLKMTWTNFNSYQGRLY----WDEPSFY 593
            NL+  KL +  N  +   +  L  +SP + TL+LK+   N    + R +    WD     
Sbjct: 357  NLKILKLETGFNKSNVPGLASLFRSSPALHTLVLKII--NDCKIERRQWNRDLWD---MS 411

Query: 592  STIMEANWEEWLQ-FQCLLEHLESVEIRNFLGCENEVRLLIVLLQKATALRKIKIVLAQ 419
            +T  E  WE  +   +  L HL+ V+I  FL CENEV L   LL+    L+++ +  A+
Sbjct: 412  TTKEEQFWESQIHTLKPFLSHLKVVKIHGFLECENEVSLAKFLLKHGKCLQEMTLCTAR 470