BLASTX nr result
ID: Coptis23_contig00018229
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00018229 (720 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002885782.1| hypothetical protein ARALYDRAFT_899310 [Arab... 56 8e-06 >ref|XP_002885782.1| hypothetical protein ARALYDRAFT_899310 [Arabidopsis lyrata subsp. lyrata] gi|297331622|gb|EFH62041.1| hypothetical protein ARALYDRAFT_899310 [Arabidopsis lyrata subsp. lyrata] Length = 279 Score = 55.8 bits (133), Expect = 8e-06 Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 3/198 (1%) Frame = +3 Query: 135 TIYVSSMSYLGKNKTLKDLCFRIKKIWTRPVITWLYISLCSAGXXXXXXXXXXXXXXGRG 314 T++ S+++ +N +K K W P++T YI+L G Sbjct: 76 TVHASALTLKNENIKIKYFPVMTFKSWKGPLVTKFYIALFILGYGFLYAIIFCPLLVFSS 135 Query: 315 SMI-VVAVGIXXXXXXXXXXXXXXXVWMLSLVISVLEDCYGLQALGKAEXXXXXXXXXXX 491 + +VA + VW LS+VIS+LE+ YG++AL KA Sbjct: 136 KLFFLVAKSVPLLILLEVYESYLAIVWNLSMVISILEETYGIKALRKAAKIAKGMKPKIF 195 Query: 492 XXSFVVMIL-YSPGILFSMINKNQQAVTTQILIAYGIT-VNFNILVKILSMMAYTVFYFE 665 + +L + G + +IN + + + +A G+ V + +++ ++ YTV YF+ Sbjct: 196 LLNLSFHLLTFGLGQILQLINWRR---SFSVTLATGLVFVCLDFALRMFQLVTYTVVYFQ 252 Query: 666 LKESHGEQIVVEEDMEYS 719 K + + D+EY+ Sbjct: 253 CKSLQSKDVESLGDVEYT 270