BLASTX nr result

ID: Coptis23_contig00018224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018224
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303863.1| predicted protein [Populus trichocarpa] gi|1...   287   3e-75
emb|CAN81085.1| hypothetical protein VITISV_028128 [Vitis vinifera]   285   2e-74
ref|XP_003632919.1| PREDICTED: phosphatidylinositol-glycan biosy...   281   2e-73
ref|XP_004137648.1| PREDICTED: uncharacterized protein C1450.15-...   265   1e-68
ref|XP_002890143.1| predicted protein [Arabidopsis lyrata subsp....   256   8e-66

>ref|XP_002303863.1| predicted protein [Populus trichocarpa] gi|118482072|gb|ABK92967.1|
           unknown [Populus trichocarpa]
           gi|222841295|gb|EEE78842.1| predicted protein [Populus
           trichocarpa]
          Length = 230

 Score =  287 bits (734), Expect = 3e-75
 Identities = 140/214 (65%), Positives = 164/214 (76%), Gaps = 6/214 (2%)
 Frame = +3

Query: 30  RDITVSTAFL------LSLATSFYVAQNIYSINLISHPIPTLSLISLVQTPITILLFSLL 191
           + I+   AFL      L LA S +VA N YSINL+SHP  TL LI +V++ I IL++S  
Sbjct: 18  KSISAPQAFLIHLISGLGLAISLWVAHNFYSINLVSHPSITLRLIWIVESAIVILIYSRF 77

Query: 192 RQNPQQCSYWKAVLRGVLGLPIGAFLMAFGAIVLGAPIGIQYLEKTIYWSLLMSVFTFVP 371
           R +PQQCSY KAV+RG+L LP+GA + A GAI LGAP+GIQYL KTI WSLLMS FT  P
Sbjct: 78  RIDPQQCSYLKAVVRGILALPVGALVNALGAIALGAPVGIQYLPKTINWSLLMSSFTVAP 137

Query: 372 AASVYGSSWKDWQRLFANTKPTGSLEYIICIPAHGAVIGAWLGAWPMPLDWERPWQEWPI 551
           AASV+GSSW  WQR+FA TKP   LEY+ICIPAHGAVIG W GAWPMPLDWERPWQEWPI
Sbjct: 138 AASVFGSSWTYWQRIFAQTKPNEPLEYMICIPAHGAVIGGWFGAWPMPLDWERPWQEWPI 197

Query: 552 CVSYGAVAGYTVGMVVSMGFVLVLGKRQRHVKKD 653
           CV+YGA+ GY VGM+ S GFVL  G+RQR +K+D
Sbjct: 198 CVTYGAMTGYLVGMLASSGFVLANGRRQR-LKED 230


>emb|CAN81085.1| hypothetical protein VITISV_028128 [Vitis vinifera]
          Length = 246

 Score =  285 bits (728), Expect = 2e-74
 Identities = 125/187 (66%), Positives = 157/187 (83%)
 Frame = +3

Query: 60  LSLATSFYVAQNIYSINLISHPIPTLSLISLVQTPITILLFSLLRQNPQQCSYWKAVLRG 239
           L LA SF+   + +S NLIS P+ TL LI + +TPI +L++S  R+NP++CSYW+AV RG
Sbjct: 50  LGLALSFWATHSFFSTNLISDPVHTLLLIWVFETPIVVLVYSRFRKNPKECSYWRAVGRG 109

Query: 240 VLGLPIGAFLMAFGAIVLGAPIGIQYLEKTIYWSLLMSVFTFVPAASVYGSSWKDWQRLF 419
           +LG+P+GA +  FGAI LGAP+GIQYL +TI WSLLMS+ TFVPAA V+GSSW DWQR+F
Sbjct: 110 LLGIPLGALINIFGAIALGAPVGIQYLLRTINWSLLMSLLTFVPAACVFGSSWTDWQRVF 169

Query: 420 ANTKPTGSLEYIICIPAHGAVIGAWLGAWPMPLDWERPWQEWPICVSYGAVAGYTVGMVV 599
           A+TKP G+++Y+IC+PAHGA+IGAWLGAWPMPLDWERPWQEWP+CVSYGA+AGY V MV 
Sbjct: 170 AHTKPIGAIDYMICLPAHGAIIGAWLGAWPMPLDWERPWQEWPVCVSYGAMAGYLVAMVA 229

Query: 600 SMGFVLV 620
           S+GF LV
Sbjct: 230 SLGFTLV 236


>ref|XP_003632919.1| PREDICTED: phosphatidylinositol-glycan biosynthesis class F
           protein-like [Vitis vinifera]
           gi|298204771|emb|CBI25269.3| unnamed protein product
           [Vitis vinifera]
          Length = 245

 Score =  281 bits (719), Expect = 2e-73
 Identities = 124/187 (66%), Positives = 155/187 (82%)
 Frame = +3

Query: 60  LSLATSFYVAQNIYSINLISHPIPTLSLISLVQTPITILLFSLLRQNPQQCSYWKAVLRG 239
           L LA SF+   + +S NLIS P+ TL L  + +TPI +L++S  R+NP++CSYW+AV RG
Sbjct: 49  LGLALSFWATHSFFSTNLISDPVHTLLLTWVFETPIVVLVYSRFRKNPKECSYWRAVGRG 108

Query: 240 VLGLPIGAFLMAFGAIVLGAPIGIQYLEKTIYWSLLMSVFTFVPAASVYGSSWKDWQRLF 419
           +LG+P+GA +  FGAI LGAP+GIQYL  TI WSLLMS+ TFVPAA V+GSSW DWQR+F
Sbjct: 109 LLGIPLGALINIFGAIALGAPVGIQYLLGTINWSLLMSLLTFVPAACVFGSSWTDWQRVF 168

Query: 420 ANTKPTGSLEYIICIPAHGAVIGAWLGAWPMPLDWERPWQEWPICVSYGAVAGYTVGMVV 599
           A+TKP G+++Y+IC+PAHGA+IGAWLGAWPMPLDWERPWQEWP+CVSYGA+AGY V MV 
Sbjct: 169 AHTKPIGAIDYMICLPAHGAIIGAWLGAWPMPLDWERPWQEWPVCVSYGAMAGYLVAMVA 228

Query: 600 SMGFVLV 620
           S+GF LV
Sbjct: 229 SLGFTLV 235


>ref|XP_004137648.1| PREDICTED: uncharacterized protein C1450.15-like [Cucumis sativus]
           gi|449501593|ref|XP_004161410.1| PREDICTED:
           uncharacterized protein C1450.15-like [Cucumis sativus]
          Length = 225

 Score =  265 bits (678), Expect = 1e-68
 Identities = 125/198 (63%), Positives = 157/198 (79%)
 Frame = +3

Query: 60  LSLATSFYVAQNIYSINLISHPIPTLSLISLVQTPITILLFSLLRQNPQQCSYWKAVLRG 239
           L+LA +F++A  I+S +LIS P  TL LI +VQ+PI ILL+S  R +  QCSY+KAV RG
Sbjct: 30  LALALAFWIAHYIFSTHLISDPSLTLFLILVVQSPIVILLYSRYRTDRHQCSYFKAVARG 89

Query: 240 VLGLPIGAFLMAFGAIVLGAPIGIQYLEKTIYWSLLMSVFTFVPAASVYGSSWKDWQRLF 419
           +LGLP GA + AFGAIVLGAPIG QY  KT+ WSL+MS+F  VP+A V+GSSW DWQRLF
Sbjct: 90  LLGLPAGAIINAFGAIVLGAPIGAQYFLKTLNWSLVMSLFNIVPSACVFGSSWIDWQRLF 149

Query: 420 ANTKPTGSLEYIICIPAHGAVIGAWLGAWPMPLDWERPWQEWPICVSYGAVAGYTVGMVV 599
           A TKP G+++++ICIPAHGA+IGAW GAWPMPLDWERPWQEWPICV+YGA+ GY++ M  
Sbjct: 150 AYTKPIGTIDHMICIPAHGAIIGAWFGAWPMPLDWERPWQEWPICVTYGAILGYSIAMAA 209

Query: 600 SMGFVLVLGKRQRHVKKD 653
           S+  VL   +  +HVK+D
Sbjct: 210 SL--VLSHQRGLQHVKRD 225


>ref|XP_002890143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335985|gb|EFH66402.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score =  256 bits (653), Expect = 8e-66
 Identities = 112/192 (58%), Positives = 153/192 (79%)
 Frame = +3

Query: 60  LSLATSFYVAQNIYSINLISHPIPTLSLISLVQTPITILLFSLLRQNPQQCSYWKAVLRG 239
           L LA  F+V  NIY ++LIS P  TL L+ +++ PI ++++SLLR+NP++CSY++AV R 
Sbjct: 32  LFLAVGFWVIHNIYFVDLISDPSLTLRLLWIIEFPIVVIIYSLLRRNPEKCSYFRAVGRS 91

Query: 240 VLGLPIGAFLMAFGAIVLGAPIGIQYLEKTIYWSLLMSVFTFVPAASVYGSSWKDWQRLF 419
           ++GL  GA + AFGA+ LGAPIG+Q L +TI+WS LMSVFT VPA +V+G+SW DW R+F
Sbjct: 92  IVGLISGALINAFGAVSLGAPIGMQSLPRTIHWSFLMSVFTVVPATAVFGASWTDWHRVF 151

Query: 420 ANTKPTGSLEYIICIPAHGAVIGAWLGAWPMPLDWERPWQEWPICVSYGAVAGYTVGMVV 599
           A+ KPTG++EY+I IPA+GA+IGAW GAWPMPLDWERPWQEWP+CV YGA+ G  VG +V
Sbjct: 152 ASLKPTGNIEYMILIPAYGAIIGAWFGAWPMPLDWERPWQEWPVCVCYGAIGGCIVGQIV 211

Query: 600 SMGFVLVLGKRQ 635
           S+  +++L K +
Sbjct: 212 SLSLMILLRKHK 223


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