BLASTX nr result

ID: Coptis23_contig00018217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018217
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270778.1| PREDICTED: uncharacterized protein LOC100259...    61   1e-07
emb|CAN69700.1| hypothetical protein VITISV_003292 [Vitis vinifera]    61   1e-07
ref|XP_002891871.1| hypothetical protein ARALYDRAFT_474670 [Arab...    58   7e-07
ref|XP_004173073.1| PREDICTED: uncharacterized protein LOC101225...    57   2e-06
ref|XP_004147758.1| PREDICTED: uncharacterized protein LOC101217...    57   2e-06

>ref|XP_002270778.1| PREDICTED: uncharacterized protein LOC100259352 [Vitis vinifera]
          Length = 418

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 22/95 (23%)
 Frame = -1

Query: 222 LMSSAVLESPSSSF---GWLSPRISFSRDFLQNQESTRNN---------------ADQDN 97
           + S   L+ P +S+   GWLSPRISFSR+F   +                     +D D 
Sbjct: 12  MSSENFLDCPPASYPTYGWLSPRISFSREFPDEESKMAGGKSPSPAEKPSDPVEVSDPDV 71

Query: 96  S----GDFEFRLEDPPKKMLDADQLFSDGKLVTSQ 4
           S    GDFEFRLED P  ML AD+LFSDGKLV  Q
Sbjct: 72  SGKDVGDFEFRLED-PVAMLPADELFSDGKLVPLQ 105


>emb|CAN69700.1| hypothetical protein VITISV_003292 [Vitis vinifera]
          Length = 389

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 22/95 (23%)
 Frame = -1

Query: 222 LMSSAVLESPSSSF---GWLSPRISFSRDFLQNQESTRNN---------------ADQDN 97
           + S   L+ P +S+   GWLSPRISFSR+F   +                     +D D 
Sbjct: 11  MSSENFLDCPPASYPTYGWLSPRISFSREFPDEESKMAGGKSPSPAEKPSDPVEVSDPDV 70

Query: 96  S----GDFEFRLEDPPKKMLDADQLFSDGKLVTSQ 4
           S    GDFEFRLED P  ML AD+LFSDGKLV  Q
Sbjct: 71  SGKDVGDFEFRLED-PVAMLPADELFSDGKLVPLQ 104


>ref|XP_002891871.1| hypothetical protein ARALYDRAFT_474670 [Arabidopsis lyrata subsp.
           lyrata] gi|297337713|gb|EFH68130.1| hypothetical protein
           ARALYDRAFT_474670 [Arabidopsis lyrata subsp. lyrata]
          Length = 400

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
 Frame = -1

Query: 216 SSAVLESPSSSFGWLSPRISFSRD------FLQNQESTRNNADQDNSGDFEFRLEDPPKK 55
           S+ V     SS+GW SPR+S +R+       +  Q+S  +  +QD   DFEF LEDP   
Sbjct: 8   SAGVSPEKFSSYGWTSPRMSLTREDNTRSSSVDKQQSDPSPENQDPVVDFEFCLEDPVT- 66

Query: 54  MLDADQLFSDGKLV 13
           ML AD+LFSDGKLV
Sbjct: 67  MLSADELFSDGKLV 80


>ref|XP_004173073.1| PREDICTED: uncharacterized protein LOC101225584 [Cucumis sativus]
          Length = 450

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 18/82 (21%)
 Frame = -1

Query: 195 PSSSFGWLSPRISFSRD-----------------FLQNQESTRN-NADQDNSGDFEFRLE 70
           P  S+GWL PR+SFSRD                  + + +STR+ + +     DFEFRL+
Sbjct: 24  PCHSYGWLGPRLSFSRDDSPPSNLAGPLSKTKPPAVADSDSTRDPDPELLPVTDFEFRLQ 83

Query: 69  DPPKKMLDADQLFSDGKLVTSQ 4
           DP   ML AD+LF DGKLV  Q
Sbjct: 84  DPVSLMLPADELFFDGKLVPLQ 105


>ref|XP_004147758.1| PREDICTED: uncharacterized protein LOC101217146 [Cucumis sativus]
          Length = 450

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 18/82 (21%)
 Frame = -1

Query: 195 PSSSFGWLSPRISFSRD-----------------FLQNQESTRN-NADQDNSGDFEFRLE 70
           P  S+GWL PR+SFSRD                  + + +STR+ + +     DFEFRL+
Sbjct: 24  PCHSYGWLGPRLSFSRDDSPPSNLAGPLSKTKPPAVADSDSTRDPDPELLPVTDFEFRLQ 83

Query: 69  DPPKKMLDADQLFSDGKLVTSQ 4
           DP   ML AD+LF DGKLV  Q
Sbjct: 84  DPVSLMLPADELFFDGKLVPLQ 105


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