BLASTX nr result

ID: Coptis23_contig00018206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018206
         (1179 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003573694.1| PREDICTED: cyclin-dependent kinase A-2-like ...   229   1e-57
dbj|BAK04834.1| predicted protein [Hordeum vulgare subsp. vulgare]    227   4e-57
gb|AEZ35253.1| cyclin-dependent kinase A [Persea americana]           224   3e-56
gb|AAL37195.1|AF321361_1 cyclin dependent kinase [Helianthus ann...   224   4e-56
ref|XP_002266125.2| PREDICTED: cell division control protein 2 h...   223   6e-56

>ref|XP_003573694.1| PREDICTED: cyclin-dependent kinase A-2-like [Brachypodium
           distachyon]
          Length = 293

 Score =  229 bits (583), Expect = 1e-57
 Identities = 123/239 (51%), Positives = 161/239 (67%), Gaps = 2/239 (0%)
 Frame = -1

Query: 933 RFHDVVHIDQFIYLVCEYVDRELKKDMNERVKKESGCYDDNTTKDLMFQIISGVAYCHER 754
           R  DVVH D+ IYLV EY+D +LKK M+     ++     +  K  ++QI+ G+AYCH  
Sbjct: 65  RLQDVVHNDKCIYLVFEYLDLDLKKHMDSSPDFKN----HHIVKSFLYQILRGIAYCHSH 120

Query: 753 GIIHRDLKPQNILFDSISKKLKIADFGLARALEFPPTKLTPDVVTIAYRAPEVLLGDPSY 574
            ++HRDLKPQN+L D  +  LK+ADFGLARA   P    T +VVT+ YRAPE+LLG   Y
Sbjct: 121 RVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQY 180

Query: 573 SYPVDMWSVGCIMAELVSEHNPLFRGIDNIGQLEHIFRVLGAPNPKTWAGVENLPRYKSA 394
           S PVD+WSVGCI AE+V++  PLF G   I +L  IFR++G PN +TW GV +LP YKSA
Sbjct: 181 STPVDVWSVGCIFAEMVNQ-KPLFPGDSEIDELFKIFRIMGTPNEETWPGVASLPDYKSA 239

Query: 393 -PK-PTMHPQGLENILEMHRDDKIAFDLLSKMLCLNPSRRITAQEALQHDYFKDPNVSS 223
            P+ P++    +   LE      +  DLLSKMLCL+PSRRI A+ AL+H+YFKD NV+S
Sbjct: 240 FPRWPSLDLATVVPTLE-----PLGIDLLSKMLCLDPSRRINARAALEHEYFKDLNVAS 293


>dbj|BAK04834.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 293

 Score =  227 bits (579), Expect = 4e-57
 Identities = 124/247 (50%), Positives = 159/247 (64%), Gaps = 11/247 (4%)
 Frame = -1

Query: 933 RFHDVVHIDQFIYLVCEYVDRELKKDMNERVKKESGCYDDNTTKDLMFQIISGVAYCHER 754
           R  DVVH ++ IYLV EY+D +LKK M+     ++     +  K  ++QI+ G+AYCH  
Sbjct: 65  RLQDVVHNEKCIYLVFEYLDLDLKKHMDSSPDFKN----HHIVKSFLYQILRGIAYCHSH 120

Query: 753 GIIHRDLKPQNILFDSISKKLKIADFGLARALEFPPTKLTPDVVTIAYRAPEVLLGDPSY 574
            ++HRDLKPQN+L D  +  LK+ADFGLARA   P    T +VVT+ YRAPE+LLG   Y
Sbjct: 121 RVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQY 180

Query: 573 SYPVDMWSVGCIMAELVSEHNPLFRGIDNIGQLEHIFRVLGAPNPKTWAGVENLPRYKSA 394
           S PVD+WSVGCI AE+V++  PLF G   I +L  IFR++G PN +TW GV +LP YKSA
Sbjct: 181 STPVDVWSVGCIFAEMVNQ-KPLFPGDSEIDELFKIFRIMGTPNEETWPGVSSLPDYKSA 239

Query: 393 -PK----------PTMHPQGLENILEMHRDDKIAFDLLSKMLCLNPSRRITAQEALQHDY 247
            PK          PT+ P GL              DLLSKMLCL+PSRRI A+ AL+H+Y
Sbjct: 240 FPKWPSVDLATVVPTLEPLGL--------------DLLSKMLCLDPSRRINARTALEHEY 285

Query: 246 FKDPNVS 226
           FKD +VS
Sbjct: 286 FKDLDVS 292


>gb|AEZ35253.1| cyclin-dependent kinase A [Persea americana]
          Length = 294

 Score =  224 bits (571), Expect = 3e-56
 Identities = 118/232 (50%), Positives = 153/232 (65%)
 Frame = -1

Query: 933 RFHDVVHIDQFIYLVCEYVDRELKKDMNERVKKESGCYDDNTTKDLMFQIISGVAYCHER 754
           R  DVVH D+ +YLV EY+D +LKK M+   +      D    K  ++QI+ G+AYCH  
Sbjct: 65  RLQDVVHSDKRLYLVFEYLDLDLKKHMDSCPEFAK---DPRLIKTFLYQILKGIAYCHSH 121

Query: 753 GIIHRDLKPQNILFDSISKKLKIADFGLARALEFPPTKLTPDVVTIAYRAPEVLLGDPSY 574
            ++HRDLKPQN+L D  +  LK+ADFGLARA   P    T +VVT+ YRAPE+LLG   Y
Sbjct: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 181

Query: 573 SYPVDMWSVGCIMAELVSEHNPLFRGIDNIGQLEHIFRVLGAPNPKTWAGVENLPRYKSA 394
           S PVD+WSVGCI AE+V++  PLF G   I +L  IFR+LG PN +TW GV +LP +KSA
Sbjct: 182 STPVDVWSVGCIFAEMVNQ-KPLFPGDSEIDELFKIFRILGTPNEETWPGVSSLPDFKSA 240

Query: 393 PKPTMHPQGLENILEMHRDDKIAFDLLSKMLCLNPSRRITAQEALQHDYFKD 238
             P   P+ L  ++     +    DLL KMLCL PSRRITA+ AL+H+YF+D
Sbjct: 241 -FPKWPPKDLTTVVP--GLEPAGIDLLCKMLCLEPSRRITAKSALEHEYFRD 289


>gb|AAL37195.1|AF321361_1 cyclin dependent kinase [Helianthus annuus]
          Length = 294

 Score =  224 bits (570), Expect = 4e-56
 Identities = 117/232 (50%), Positives = 154/232 (66%)
 Frame = -1

Query: 933 RFHDVVHIDQFIYLVCEYVDRELKKDMNERVKKESGCYDDNTTKDLMFQIISGVAYCHER 754
           R  DVVH D+ +YLV EY+D +LKK M+   +      D    K  ++QI+ G+AYCH  
Sbjct: 65  RLQDVVHSDKRLYLVFEYLDLDLKKHMDSCPEFSK---DPRLVKTFLYQILRGIAYCHSH 121

Query: 753 GIIHRDLKPQNILFDSISKKLKIADFGLARALEFPPTKLTPDVVTIAYRAPEVLLGDPSY 574
            ++HRDLKPQN+L D  +  LK+ADFGLARA   P    T +VVT+ YRAPE+LLG   Y
Sbjct: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 181

Query: 573 SYPVDMWSVGCIMAELVSEHNPLFRGIDNIGQLEHIFRVLGAPNPKTWAGVENLPRYKSA 394
           S PVD+WSVGCI AE+V++  PLF G   I +L  IFR++G PN +TW GV +LP +KSA
Sbjct: 182 STPVDVWSVGCIFAEMVNQ-RPLFPGDSEIDELFKIFRIMGTPNEETWPGVTSLPDFKSA 240

Query: 393 PKPTMHPQGLENILEMHRDDKIAFDLLSKMLCLNPSRRITAQEALQHDYFKD 238
             P    + L  ++     +K   DLL KMLCL+PS+RITA+ AL+H+YFKD
Sbjct: 241 -FPKWSSKDLATVVP--NLEKTGLDLLRKMLCLDPSKRITARTALEHEYFKD 289


>ref|XP_002266125.2| PREDICTED: cell division control protein 2 homolog [Vitis vinifera]
           gi|297744790|emb|CBI38058.3| unnamed protein product
           [Vitis vinifera]
          Length = 294

 Score =  223 bits (569), Expect = 6e-56
 Identities = 120/232 (51%), Positives = 152/232 (65%)
 Frame = -1

Query: 933 RFHDVVHIDQFIYLVCEYVDRELKKDMNERVKKESGCYDDNTTKDLMFQIISGVAYCHER 754
           R  DVVH ++ +YLV EY+D +LKK M+          D    K  + QI+ G+AYCH  
Sbjct: 65  RLQDVVHSEKRLYLVFEYLDLDLKKHMDS---SPDFAKDLRLIKMFLHQILRGIAYCHSH 121

Query: 753 GIIHRDLKPQNILFDSISKKLKIADFGLARALEFPPTKLTPDVVTIAYRAPEVLLGDPSY 574
            ++HRDLKPQN+L D  +  LK+ADFGLARA   P    T +VVT+ YRAPE+LLG   Y
Sbjct: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 181

Query: 573 SYPVDMWSVGCIMAELVSEHNPLFRGIDNIGQLEHIFRVLGAPNPKTWAGVENLPRYKSA 394
           S PVD+WSVGCI AE+V++  PLF G   I +L  IFRVLG PN  TW GV +LP +KSA
Sbjct: 182 STPVDVWSVGCIFAEMVNQ-RPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSA 240

Query: 393 PKPTMHPQGLENILEMHRDDKIAFDLLSKMLCLNPSRRITAQEALQHDYFKD 238
             P   P+ L  ++     +    DLLSKMLCL+PSRRITA+ AL+H+YFKD
Sbjct: 241 -FPKWPPKDLATVVP--NLESAGIDLLSKMLCLDPSRRITARSALEHEYFKD 289


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