BLASTX nr result
ID: Coptis23_contig00018205
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00018205
(1224 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285464.1| PREDICTED: uncharacterized protein LOC100243... 365 1e-98
ref|XP_002524515.1| polynucleotide kinase- 3'-phosphatase, putat... 353 5e-95
ref|XP_004165414.1| PREDICTED: polynucleotide 3'-phosphatase ZDP... 341 2e-91
gb|AFK35881.1| unknown [Lotus japonicus] 341 3e-91
ref|XP_004146024.1| PREDICTED: polynucleotide 3'-phosphatase ZDP... 340 4e-91
>ref|XP_002285464.1| PREDICTED: uncharacterized protein LOC100243613 [Vitis vinifera]
gi|302142893|emb|CBI20188.3| unnamed protein product
[Vitis vinifera]
Length = 354
Score = 365 bits (937), Expect = 1e-98
Identities = 191/327 (58%), Positives = 236/327 (72%), Gaps = 45/327 (13%)
Frame = -2
Query: 1016 TIPSKTLRLGLVNRDERGFNMTKWHHLNCFPS---SLNSVENITGFSLLNSTDQESLIN- 849
TI + +RLGLV R RGF+MTKWHH++CF + S++S E I GF+ L S+DQE+L
Sbjct: 27 TISANAVRLGLVTRGARGFDMTKWHHVHCFSAGSESISSAEMIQGFASLKSSDQEALKKL 86
Query: 848 ---FAK---------------------------RKAEEIEGENDEISGKKTK------GG 777
FAK ++ E+ + + +E KKTK
Sbjct: 87 VDGFAKSLDEVLDEGKDLTEGSKELICEELGVHKRDEDEKDKREERDSKKTKMSAPALKA 146
Query: 776 EIEIVFSDSDVKNEYKGITLMNKWKAFETVIFLERDECLVDSKKIAAFDFDGCVAKTNVK 597
E EI F+ S++K++YK TL+ KWKAF+TVIFLERD+ L DSKKIAAFDFDGC+AKT+VK
Sbjct: 147 EQEIAFAVSNIKDKYKDATLLPKWKAFQTVIFLERDDDLHDSKKIAAFDFDGCLAKTSVK 206
Query: 596 RVGENAWSLMYDCIPDKLKSLYEDGYKVVIFTNESNIDRWKNKRNVAIDSKVGRLNNFIK 417
RVG +AWSLMY IPDKL+SLY DGYK+VIFTNESNI+RWKNKR VA+DSK+GRLNNFIK
Sbjct: 207 RVGPDAWSLMYPSIPDKLQSLYNDGYKLVIFTNESNIERWKNKRQVAVDSKIGRLNNFIK 266
Query: 416 RVGVPVQVFIACGYG-----GEDRYRKPKTGMWRLMEKHLNSGNEIDMNESFYVGDAAGR 252
V VP+QVFI+CG+ ED +RKPK GMWR+ME+H NSG IDM++SFYVGDAAGR
Sbjct: 267 CVKVPIQVFISCGFDKSDGQAEDPFRKPKPGMWRIMEQHFNSGISIDMDQSFYVGDAAGR 326
Query: 251 VGDHSDADIKFAEAIGLKFYVPEDYFE 171
+ DHSDADIKFA+AIGLKFYVPE+YF+
Sbjct: 327 LNDHSDADIKFAQAIGLKFYVPEEYFD 353
>ref|XP_002524515.1| polynucleotide kinase- 3'-phosphatase, putative [Ricinus communis]
gi|223536189|gb|EEF37842.1| polynucleotide kinase-
3'-phosphatase, putative [Ricinus communis]
Length = 332
Score = 353 bits (906), Expect = 5e-95
Identities = 172/304 (56%), Positives = 220/304 (72%), Gaps = 24/304 (7%)
Frame = -2
Query: 1013 IPSKTLRLGLVNRDERGFNMTKWHHLNCFPSSLNSVENITGFSLLNSTDQESLINFAKRK 834
I +K LRLGLV +D RGF+MTKWHHL+CF +++S + I GF+ L S DQ++L +
Sbjct: 27 ISAKALRLGLVTKDSRGFDMTKWHHLDCFSITISSTDAIGGFASLQSRDQDALKKLISKG 86
Query: 833 AEEIEGENDEISGKKTKGG-----------------------EIEIVFSDSDVKNEYKGI 723
E+ + K+T+ ++EI S D+K+ YK +
Sbjct: 87 GREVVEGSPNRGSKRTRANMEEIELEERNSMITKLSTATEEAQLEIAVSQIDIKDTYKDV 146
Query: 722 TLMNKWKAFETVIFLERDECLVDSKKIAAFDFDGCVAKTNVKRVGENAWSLMYDCIPDKL 543
L+ KWKAF+TVIFLE D+ L DS KIAAFDFDGC+A+T++KR+G +AWSLMY IP KL
Sbjct: 147 LLLPKWKAFQTVIFLEGDDGLHDSSKIAAFDFDGCLAQTSIKRIGADAWSLMYPSIPKKL 206
Query: 542 KSLYEDGYKVVIFTNESNIDRWKNKRNVAIDSKVGRLNNFIKRVGVPVQVFIACGYGG-E 366
+ LY+DGYK+VIFTNESNIDRWKNKR VA+DSK+GRLNNFI+RV VP+QVFIAC E
Sbjct: 207 QGLYKDGYKLVIFTNESNIDRWKNKRQVAVDSKIGRLNNFIRRVKVPIQVFIACADSKVE 266
Query: 365 DRYRKPKTGMWRLMEKHLNSGNEIDMNESFYVGDAAGRVGDHSDADIKFAEAIGLKFYVP 186
D +RKPK GMW++ME+H NSG ID+++SFYVGDAAGR DHSDADI+FA+A+GLKF+VP
Sbjct: 267 DPFRKPKPGMWQIMERHFNSGISIDLDQSFYVGDAAGRNNDHSDADIRFAQAVGLKFFVP 326
Query: 185 EDYF 174
EDYF
Sbjct: 327 EDYF 330
>ref|XP_004165414.1| PREDICTED: polynucleotide 3'-phosphatase ZDP-like [Cucumis sativus]
Length = 387
Score = 341 bits (875), Expect = 2e-91
Identities = 178/325 (54%), Positives = 219/325 (67%), Gaps = 44/325 (13%)
Frame = -2
Query: 1016 TIPSKTLRLGLVNRDERGFNMTKWHHLNCF---PSSLNSVENITGFSLLNSTDQESLINF 846
TIP+ TLRLG V RD RGF+MT+W H +C P ++S E+I GF+LL +DQE+L
Sbjct: 61 TIPASTLRLGFVTRDGRGFDMTRWFHSDCASFGPRPVSSAEDINGFALLKDSDQEALRKM 120
Query: 845 AKRKAEEI-------------EGENDEISGKKTKGGE----------------------I 771
R E EG+ ++ K G E +
Sbjct: 121 VCRSHESKVHKRDEDEEDGVEEGDQKKVKVHKKDGVEEDGVEERDQKNVKLSTSSLQPKL 180
Query: 770 EIVFSDSDVKNEYKGITLMNKWKAFETVIFLERDECLVDSKKIAAFDFDGCVAKTNVKRV 591
+IV + S++K +YK TL+ KWKAF+T+IFLE+D+ L S KIAAFDFDGC+A T+VKRV
Sbjct: 181 DIVLTASNIKTKYKDATLLPKWKAFQTLIFLEQDDGLHHSSKIAAFDFDGCLANTSVKRV 240
Query: 590 GENAWSLMYDCIPDKLKSLYEDGYKVVIFTNESNIDRWKNKRNVAIDSKVGRLNNFIKRV 411
G AWSLMY IP KL+SLY+DGYK+VIFTNESNI+RWKNKR VA+DSK+GRLNNFI +V
Sbjct: 241 GAEAWSLMYPSIPQKLQSLYDDGYKLVIFTNESNIERWKNKRQVAVDSKLGRLNNFISQV 300
Query: 410 GVPVQVFIACGYGG------EDRYRKPKTGMWRLMEKHLNSGNEIDMNESFYVGDAAGRV 249
VPVQVF+ACG G ED +RKPK GMW +ME H N G ID+++ FYVGDAAGR
Sbjct: 301 KVPVQVFVACGIGSKSGKSEEDMFRKPKPGMWHIMESHFNGGIPIDIDQCFYVGDAAGRA 360
Query: 248 GDHSDADIKFAEAIGLKFYVPEDYF 174
DHSDADIKFAEAIGLKFYVPE++F
Sbjct: 361 KDHSDADIKFAEAIGLKFYVPEEFF 385
>gb|AFK35881.1| unknown [Lotus japonicus]
Length = 380
Score = 341 bits (874), Expect = 3e-91
Identities = 181/311 (58%), Positives = 220/311 (70%), Gaps = 29/311 (9%)
Frame = -2
Query: 1016 TIPSKTLRLGLVNRDE-RGFNMTKWHHLNCFPSSL-NSVENITGFSLLNSTDQESLINF- 846
TI +K+LRLG+V++D+ RGF KWH L CFP +S ITGFS L S+DQE++
Sbjct: 69 TIENKSLRLGIVSKDKTRGFETVKWHRLTCFPPPYPDSPHIITGFSSLESSDQEAVKELF 128
Query: 845 ---------AKRKAEEIEGEN---DEISGKKTK------GGEIEIVFSDSDVKNEYKGIT 720
R E+I+ E +E KK K ++I FS SDV ++YK T
Sbjct: 129 ESHDCSEEKVSRATEDIQNEQKETEESDSKKRKLSTSDVKAVVDISFSVSDVMSKYKDAT 188
Query: 719 LMNKWKAFETVIFLERDECLVDSKKIAAFDFDGCVAKTNVKRVGENAWSLMYDCIPDKLK 540
L+ KWKAF+TVIFLERD+ L DS KIAAFDFDGC+A T V RVG AWSLMY IPDKL+
Sbjct: 189 LLPKWKAFQTVIFLERDDGLRDSSKIAAFDFDGCLANTAVNRVGPKAWSLMYQSIPDKLQ 248
Query: 539 SLYEDGYKVVIFTNESNIDRWKNKRNVAIDSKVGRLNNFIKRVGVPVQVFIACGYGG--- 369
SLY +GYK+VIFTNESNI+RWK R A+DSK+GRLNNFI++V VP+QVFIACG
Sbjct: 249 SLYNNGYKLVIFTNESNIERWKKSRQKAVDSKIGRLNNFIEKVKVPIQVFIACGLSNSGK 308
Query: 368 -----EDRYRKPKTGMWRLMEKHLNSGNEIDMNESFYVGDAAGRVGDHSDADIKFAEAIG 204
+D YRKPK GMW+LME+H NSG IDM++SFYVGDAAGR DHSDADIKFAEAIG
Sbjct: 309 AAGKEDDPYRKPKPGMWQLMEQHSNSGITIDMDQSFYVGDAAGRKSDHSDADIKFAEAIG 368
Query: 203 LKFYVPEDYFE 171
LKF++PE+YF+
Sbjct: 369 LKFHLPEEYFK 379
>ref|XP_004146024.1| PREDICTED: polynucleotide 3'-phosphatase ZDP-like [Cucumis sativus]
Length = 387
Score = 340 bits (872), Expect = 4e-91
Identities = 177/325 (54%), Positives = 219/325 (67%), Gaps = 44/325 (13%)
Frame = -2
Query: 1016 TIPSKTLRLGLVNRDERGFNMTKWHHLNCF---PSSLNSVENITGFSLLNSTDQESLINF 846
TIP+ TLRLG V RD RGF+MT+W H +C P ++S E+I GF+LL +DQE+L
Sbjct: 61 TIPASTLRLGFVTRDGRGFDMTRWFHSDCASFGPRPVSSAEDINGFALLKDSDQEALRKM 120
Query: 845 AKRKAEEI-------------EGENDEISGKKTKGGE----------------------I 771
R E EG+ ++ K G E +
Sbjct: 121 VCRSHESKVHKRDEDEEDGVEEGDQKKVKVHKKDGVEEDGVEERDQKNVKLSTSSLQPKL 180
Query: 770 EIVFSDSDVKNEYKGITLMNKWKAFETVIFLERDECLVDSKKIAAFDFDGCVAKTNVKRV 591
+IV + S++K +YK TL+ KWKAF+T+IFLE+D+ L S KIAAFDFDGC+A T+VKRV
Sbjct: 181 DIVLTASNIKTKYKDATLLPKWKAFQTLIFLEQDDGLHHSSKIAAFDFDGCLANTSVKRV 240
Query: 590 GENAWSLMYDCIPDKLKSLYEDGYKVVIFTNESNIDRWKNKRNVAIDSKVGRLNNFIKRV 411
G AWSLMY IP KL+SLY+DGYK+VIFTNESNI+RWKNKR VA+DSK+GRLNNFI +V
Sbjct: 241 GAEAWSLMYPSIPQKLQSLYDDGYKLVIFTNESNIERWKNKRQVAVDSKLGRLNNFISQV 300
Query: 410 GVPVQVFIACGYGG------EDRYRKPKTGMWRLMEKHLNSGNEIDMNESFYVGDAAGRV 249
VPVQVF+ACG G ED +RKPK GMW +ME H N G ID+++ FYVGDAAGR
Sbjct: 301 KVPVQVFVACGIGSKSGKSEEDMFRKPKPGMWHIMESHFNGGIPIDIDQCFYVGDAAGRA 360
Query: 248 GDHSDADIKFAEAIGLKFYVPEDYF 174
DHSDADIKFA+AIGLKFYVPE++F
Sbjct: 361 KDHSDADIKFAQAIGLKFYVPEEFF 385