BLASTX nr result

ID: Coptis23_contig00018204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018204
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557243.1| PREDICTED: tRNA 2'-phosphotransferase 1-like...   137   7e-31
gb|AFK41153.1| unknown [Lotus japonicus]                              136   2e-30
gb|AFK33903.1| unknown [Lotus japonicus]                              136   2e-30
ref|XP_004133917.1| PREDICTED: putative tRNA 2'-phosphotransfera...   132   2e-29
gb|AFK46189.1| unknown [Medicago truncatula]                          132   3e-29

>ref|XP_003557243.1| PREDICTED: tRNA 2'-phosphotransferase 1-like [Brachypodium
           distachyon]
          Length = 285

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/81 (81%), Positives = 73/81 (90%)
 Frame = +1

Query: 1   KRLHVHFSSGLPSGGEIISGMRRDVNILIFLDVKKALGDGLKLYLSDNKVILTEGVDGVV 180
           +RLHVHFSSGLPS GE+ISGMRR  NILI+LDV KAL DG+KLY+S+NKVILTEG DGVV
Sbjct: 205 ERLHVHFSSGLPSDGEVISGMRRSANILIYLDVSKALQDGMKLYISENKVILTEGFDGVV 264

Query: 181 PVKYFEKIETWPGR*PI*FKR 243
           PVKYFEKIETWPGR PI F+R
Sbjct: 265 PVKYFEKIETWPGRAPIPFQR 285


>gb|AFK41153.1| unknown [Lotus japonicus]
          Length = 293

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/79 (82%), Positives = 72/79 (91%)
 Frame = +1

Query: 1   KRLHVHFSSGLPSGGEIISGMRRDVNILIFLDVKKALGDGLKLYLSDNKVILTEGVDGVV 180
           KRLHVHFS GLP+ GE+ISGMRRDVN+LIFLDV+KAL +GLKLY+SDNKVILTEG DGVV
Sbjct: 215 KRLHVHFSCGLPTDGEVISGMRRDVNVLIFLDVRKALEEGLKLYISDNKVILTEGFDGVV 274

Query: 181 PVKYFEKIETWPGR*PI*F 237
           P KYFEKIE+WPGR PI F
Sbjct: 275 PPKYFEKIESWPGRQPIPF 293


>gb|AFK33903.1| unknown [Lotus japonicus]
          Length = 293

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/79 (82%), Positives = 72/79 (91%)
 Frame = +1

Query: 1   KRLHVHFSSGLPSGGEIISGMRRDVNILIFLDVKKALGDGLKLYLSDNKVILTEGVDGVV 180
           KRLHVHFS GLP+ GE+ISGMRRDVN+LIFLDV+KAL +GLKLY+SDNKVILTEG DGVV
Sbjct: 215 KRLHVHFSCGLPTDGEVISGMRRDVNVLIFLDVRKALEEGLKLYISDNKVILTEGFDGVV 274

Query: 181 PVKYFEKIETWPGR*PI*F 237
           P KYFEKIE+WPGR PI F
Sbjct: 275 PPKYFEKIESWPGRQPIPF 293


>ref|XP_004133917.1| PREDICTED: putative tRNA 2'-phosphotransferase-like [Cucumis
           sativus] gi|449529309|ref|XP_004171642.1| PREDICTED:
           putative tRNA 2'-phosphotransferase-like [Cucumis
           sativus]
          Length = 254

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/79 (77%), Positives = 72/79 (91%)
 Frame = +1

Query: 1   KRLHVHFSSGLPSGGEIISGMRRDVNILIFLDVKKALGDGLKLYLSDNKVILTEGVDGVV 180
           KRLHVHFS GLP+ GE+ISGMRRDVN+LIFLDV+KAL DG+KLY+SDN+VILTEG DGVV
Sbjct: 176 KRLHVHFSCGLPTDGEVISGMRRDVNVLIFLDVQKALEDGMKLYISDNRVILTEGFDGVV 235

Query: 181 PVKYFEKIETWPGR*PI*F 237
           P+KYF+KIE+WP R P+ F
Sbjct: 236 PMKYFQKIESWPNRQPVPF 254


>gb|AFK46189.1| unknown [Medicago truncatula]
          Length = 289

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/79 (78%), Positives = 71/79 (89%)
 Frame = +1

Query: 1   KRLHVHFSSGLPSGGEIISGMRRDVNILIFLDVKKALGDGLKLYLSDNKVILTEGVDGVV 180
           KRLHVHFS GLP+ GE+ISGMRRDVN+LI+LDV+KAL +G+KLY+SDNKVILTEG DGVV
Sbjct: 211 KRLHVHFSRGLPTDGEVISGMRRDVNVLIYLDVRKALEEGMKLYISDNKVILTEGFDGVV 270

Query: 181 PVKYFEKIETWPGR*PI*F 237
           P KYF KIE+WPGR PI F
Sbjct: 271 PSKYFRKIESWPGRQPIPF 289


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