BLASTX nr result

ID: Coptis23_contig00018198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018198
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270044.1| PREDICTED: uncharacterized protein LOC100251...   103   2e-20
ref|XP_004134782.1| PREDICTED: uncharacterized protein LOC101203...    94   1e-17
emb|CBI33003.3| unnamed protein product [Vitis vinifera]               94   1e-17
gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]    91   7e-17
ref|XP_003594150.1| Cytochrome b6 [Medicago truncatula] gi|35548...    91   7e-17

>ref|XP_002270044.1| PREDICTED: uncharacterized protein LOC100251709 [Vitis vinifera]
          Length = 340

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/85 (63%), Positives = 66/85 (77%)
 Frame = -1

Query: 278 SNGSVSRKVSSAPCSRSNSAGESKSRKWPNSPSRGGGIHLGRNSPVWQVRRGASGLRNTE 99
           + G+ +RKVSSAPCSRSNSAGESKSRKWP+SP R  G+HLGR+SPVWQVRRG S  ++ E
Sbjct: 176 AGGAGTRKVSSAPCSRSNSAGESKSRKWPSSPGR-PGVHLGRSSPVWQVRRGGSASKSLE 234

Query: 98  PVVRNNVEKSGLRKGGLRSKNINNR 24
           P+VR N EK   ++G   S+N  NR
Sbjct: 235 PLVR-NAEKGSKKEG---SENRRNR 255


>ref|XP_004134782.1| PREDICTED: uncharacterized protein LOC101203369 [Cucumis sativus]
           gi|449518021|ref|XP_004166042.1| PREDICTED:
           uncharacterized protein LOC101223271 [Cucumis sativus]
          Length = 332

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/60 (76%), Positives = 51/60 (85%)
 Frame = -1

Query: 263 SRKVSSAPCSRSNSAGESKSRKWPNSPSRGGGIHLGRNSPVWQVRRGASGLRNTEPVVRN 84
           SRKV+SAPCSRSNSAGESKSRKWP+SPSR GG+HLGR+SPVWQVRRG S  +  E   RN
Sbjct: 165 SRKVNSAPCSRSNSAGESKSRKWPSSPSR-GGVHLGRSSPVWQVRRGGSVPKTPETFSRN 223


>emb|CBI33003.3| unnamed protein product [Vitis vinifera]
          Length = 203

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/62 (70%), Positives = 53/62 (85%)
 Frame = -1

Query: 278 SNGSVSRKVSSAPCSRSNSAGESKSRKWPNSPSRGGGIHLGRNSPVWQVRRGASGLRNTE 99
           + G+ +RKVSSAPCSRSNSAGESKSRKWP+SP R  G+HLGR+SPVWQVRRG S  ++ E
Sbjct: 130 AGGAGTRKVSSAPCSRSNSAGESKSRKWPSSPGR-PGVHLGRSSPVWQVRRGGSASKSLE 188

Query: 98  PV 93
           P+
Sbjct: 189 PL 190


>gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]
          Length = 347

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
 Frame = -1

Query: 266 VSRKVSSAPCSRSNSAGESKSRKWPNSPSRGGGIHLGRNSPVWQVRRGASGLRNTEPVVR 87
           V+RKV+SAPCSRSNSAGESKSRKWP+SP R  G+H+GRNSPVWQVRRG     + +    
Sbjct: 188 VTRKVNSAPCSRSNSAGESKSRKWPSSPGR-AGVHVGRNSPVWQVRRGGGKNSDQQTQQG 246

Query: 86  NNVEKSGLRKGGL--RSKNINNRGG 18
           +N +K   ++  +  RSK ++  GG
Sbjct: 247 SNTDKELKKEATVSRRSKVVSGGGG 271


>ref|XP_003594150.1| Cytochrome b6 [Medicago truncatula] gi|355483198|gb|AES64401.1|
           Cytochrome b6 [Medicago truncatula]
          Length = 385

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
 Frame = -1

Query: 266 VSRKVSSAPCSRSNSAGESKSRKWPNSPSRGGGIHLGRNSPVWQVRRGASGLRNTEPVVR 87
           V+RKV+SAPCSRSNSAGESKSRKWP+SP R  G+H+GRNSPVWQVRRG     + +    
Sbjct: 188 VTRKVNSAPCSRSNSAGESKSRKWPSSPGR-AGVHVGRNSPVWQVRRGGGKNSDQQTQQG 246

Query: 86  NNVEKSGLRKGGL--RSKNINNRGG 18
           +N +K   ++  +  RSK ++  GG
Sbjct: 247 SNTDKELKKEATVSRRSKVVSGGGG 271


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