BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018190
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22968.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like ...    74   1e-11
ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like ...    74   1e-11
ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x P...    58   9e-07

>emb|CBI22968.3| unnamed protein product [Vitis vinifera]
          Length = 109

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 52/96 (54%), Positives = 60/96 (62%), Gaps = 8/96 (8%)
 Frame = +3

Query: 60  AFELAGVVSIEVPRRNESFKSLEEGSPLGS---QVFKSPGGRIRSFKRILSRDRKQPSTP 230
           AFELAGV SIEVPRRNE+F   E+ S L S   +V KSPG RI S KRILSRDRK   +P
Sbjct: 11  AFELAGV-SIEVPRRNENFGLSEDESLLDSPATRVQKSPGSRILSLKRILSRDRKSMLSP 69

Query: 231 MS----CCSSAAATEIDLERG-ENVEQAQQASSPTP 323
            S     C S    E D+ERG E+ +Q Q  + P P
Sbjct: 70  TSVPGVSCGSVTEFEADIERGTEDTQQIQTQTQPQP 105


>ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 2 [Vitis
           vinifera]
          Length = 320

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 50/94 (53%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
 Frame = +3

Query: 66  ELAGVVSIEVPRRNESFKSLEEGSPLGS---QVFKSPGGRIRSFKRILSRDRKQPSTPMS 236
           ELAGV SIEVPRRNE+F   E+ S L S   +V KSPG RI S KRILSRDRK   +P S
Sbjct: 224 ELAGV-SIEVPRRNENFGLSEDESLLDSPATRVQKSPGSRILSLKRILSRDRKSMLSPTS 282

Query: 237 ----CCSSAAATEIDLERG-ENVEQAQQASSPTP 323
                C S    E D+ERG E+ +Q Q  + P P
Sbjct: 283 VPGVSCGSVTEFEADIERGTEDTQQIQTQTQPQP 316


>ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 1 [Vitis
           vinifera]
          Length = 317

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 50/94 (53%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
 Frame = +3

Query: 66  ELAGVVSIEVPRRNESFKSLEEGSPLGS---QVFKSPGGRIRSFKRILSRDRKQPSTPMS 236
           ELAGV SIEVPRRNE+F   E+ S L S   +V KSPG RI S KRILSRDRK   +P S
Sbjct: 221 ELAGV-SIEVPRRNENFGLSEDESLLDSPATRVQKSPGSRILSLKRILSRDRKSMLSPTS 279

Query: 237 ----CCSSAAATEIDLERG-ENVEQAQQASSPTP 323
                C S    E D+ERG E+ +Q Q  + P P
Sbjct: 280 VPGVSCGSVTEFEADIERGTEDTQQIQTQTQPQP 313


>ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|222864548|gb|EEF01679.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 6/80 (7%)
 Frame = +3

Query: 66  ELAGVVSIEVPRRNESFKSLEEG-SPLGSQVFKSPGGRIRSFKRILSRDRKQPSTP---- 230
           EL GV +IEVPRRN +F+      SP  S  F+SP  R+ SFKR+LSR+R+  ++P    
Sbjct: 193 ELIGV-TIEVPRRNGNFEDESNTESPSASHAFRSPMSRMLSFKRMLSRERRGTASPNVAT 251

Query: 231 -MSCCSSAAATEIDLERGEN 287
            +SC   +  TE+D+ERG++
Sbjct: 252 SVSCGGESGTTEMDVERGQD 271


>gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x Populus alba]
          Length = 293

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
 Frame = +3

Query: 81  VSIEVPRRNESFKSLEEG-SPLGSQVFKSPGGRIRSFKRILSRDRKQPSTP-----MSCC 242
           V+I+VPRRN +F+      SP  S  F+SP  R+ SFKR+LSR+R+   +P     +SC 
Sbjct: 210 VTIDVPRRNGNFEDESNTESPSASHSFRSPMSRMLSFKRMLSRERRGTVSPTVANSVSCG 269

Query: 243 SSAAATEIDLERGENVEQAQQ 305
             +  TE D+E+G +    QQ
Sbjct: 270 GGSGTTEFDIEQGRDESMPQQ 290