BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018189
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22968.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like ...    77   1e-12
ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like ...    77   1e-12
ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x P...    59   5e-07

>emb|CBI22968.3| unnamed protein product [Vitis vinifera]
          Length = 109

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 52/96 (54%), Positives = 60/96 (62%), Gaps = 8/96 (8%)
 Frame = +3

Query: 60  AFELAGMVSIEVPRRNESFKNLEEGSPLGS---QVFKSPGGRIRSFKSILSRDRKQPSTP 230
           AFELAG VSIEVPRRNE+F   E+ S L S   +V KSPG RI S K ILSRDRK   +P
Sbjct: 11  AFELAG-VSIEVPRRNENFGLSEDESLLDSPATRVQKSPGSRILSLKRILSRDRKSMLSP 69

Query: 231 MS----CCGSAAVIEIDLERG-ENEEQAQQASSPTP 323
            S     CGS    E D+ERG E+ +Q Q  + P P
Sbjct: 70  TSVPGVSCGSVTEFEADIERGTEDTQQIQTQTQPQP 105


>ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 2 [Vitis
           vinifera]
          Length = 320

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 52/99 (52%), Positives = 62/99 (62%), Gaps = 8/99 (8%)
 Frame = +3

Query: 51  RRQAFELAGMVSIEVPRRNESFKNLEEGSPLGS---QVFKSPGGRIRSFKSILSRDRKQP 221
           RR++ ELAG VSIEVPRRNE+F   E+ S L S   +V KSPG RI S K ILSRDRK  
Sbjct: 219 RRKSSELAG-VSIEVPRRNENFGLSEDESLLDSPATRVQKSPGSRILSLKRILSRDRKSM 277

Query: 222 STPMS----CCGSAAVIEIDLERG-ENEEQAQQASSPTP 323
            +P S     CGS    E D+ERG E+ +Q Q  + P P
Sbjct: 278 LSPTSVPGVSCGSVTEFEADIERGTEDTQQIQTQTQPQP 316


>ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 1 [Vitis
           vinifera]
          Length = 317

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 52/99 (52%), Positives = 62/99 (62%), Gaps = 8/99 (8%)
 Frame = +3

Query: 51  RRQAFELAGMVSIEVPRRNESFKNLEEGSPLGS---QVFKSPGGRIRSFKSILSRDRKQP 221
           RR++ ELAG VSIEVPRRNE+F   E+ S L S   +V KSPG RI S K ILSRDRK  
Sbjct: 216 RRKSSELAG-VSIEVPRRNENFGLSEDESLLDSPATRVQKSPGSRILSLKRILSRDRKSM 274

Query: 222 STPMS----CCGSAAVIEIDLERG-ENEEQAQQASSPTP 323
            +P S     CGS    E D+ERG E+ +Q Q  + P P
Sbjct: 275 LSPTSVPGVSCGSVTEFEADIERGTEDTQQIQTQTQPQP 313


>ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|222864548|gb|EEF01679.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
 Frame = +3

Query: 51  RRQAFELAGMVSIEVPRRNESFKNLEEG-SPLGSQVFKSPGGRIRSFKSILSRDRKQPST 227
           RR+  EL G V+IEVPRRN +F++     SP  S  F+SP  R+ SFK +LSR+R+  ++
Sbjct: 188 RRKQMELIG-VTIEVPRRNGNFEDESNTESPSASHAFRSPMSRMLSFKRMLSRERRGTAS 246

Query: 228 P-----MSCCGSAAVIEIDLERGENE 290
           P     +SC G +   E+D+ERG++E
Sbjct: 247 PNVATSVSCGGESGTTEMDVERGQDE 272


>gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x Populus alba]
          Length = 293

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
 Frame = +3

Query: 81  VSIEVPRRNESFKNLEEG-SPLGSQVFKSPGGRIRSFKSILSRDRKQPSTP-----MSCC 242
           V+I+VPRRN +F++     SP  S  F+SP  R+ SFK +LSR+R+   +P     +SC 
Sbjct: 210 VTIDVPRRNGNFEDESNTESPSASHSFRSPMSRMLSFKRMLSRERRGTVSPTVANSVSCG 269

Query: 243 GSAAVIEIDLERGENEEQAQQ 305
           G +   E D+E+G +E   QQ
Sbjct: 270 GGSGTTEFDIEQGRDESMPQQ 290