BLASTX nr result

ID: Coptis23_contig00018187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018187
         (1053 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303369.1| predicted protein [Populus trichocarpa] gi|2...   358   2e-96
ref|XP_003524078.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   355   1e-95
ref|NP_001242611.1| uncharacterized protein LOC100816564 [Glycin...   350   3e-94
ref|XP_004147225.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   349   7e-94
ref|XP_002532357.1| Ubiquitin carboxyl-terminal hydrolase isozym...   348   1e-93

>ref|XP_002303369.1| predicted protein [Populus trichocarpa] gi|222840801|gb|EEE78348.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  358 bits (918), Expect = 2e-96
 Identities = 176/226 (77%), Positives = 199/226 (88%)
 Frame = -2

Query: 914 AKRWLPLEANPEIMNQFIWGLGLPEVEAEFCDVYGLDDELLEMVPKPVIAVLFLYPITAE 735
           AKRWLPLEANP++MNQF+WGLGLP  EAE CDVYGLD+ELLEMVPKPV+AVLFLYPITA+
Sbjct: 10  AKRWLPLEANPDVMNQFLWGLGLPLDEAECCDVYGLDEELLEMVPKPVLAVLFLYPITAQ 69

Query: 734 SEAERMLEKDSVNKDVSDKVYFLKQTVGNACGTIGLLHAVGNLSSEIKFVEESYLDKFFK 555
           SEAER ++++S+  D S KVYF+KQTVGNACGTIGLLHAVGN++SEIK  + S+ D+FFK
Sbjct: 70  SEAER-IQQESIETDPSSKVYFMKQTVGNACGTIGLLHAVGNITSEIKLADGSFFDRFFK 128

Query: 554 STANMDPLERAVFLEKDREMEAAHSVAATAGDTEAPNINERIDTHFICFTCVDGDLYELD 375
           STANMDPLERA FLE DREME AHSVAAT GDTEA    E +DTHFICFTCVDG L+ELD
Sbjct: 129 STANMDPLERARFLENDREMEDAHSVAATGGDTEA---TENVDTHFICFTCVDGKLFELD 185

Query: 374 GRKSQPISHGASSPSSLLQDATKVIKAMIQKNPNSLNFNVIALSRR 237
           GRKS PISHGASSP SLLQDA KVI+ MI+KNP SLNFNVIA+S+R
Sbjct: 186 GRKSGPISHGASSPGSLLQDAAKVIQGMIEKNPGSLNFNVIAISKR 231


>ref|XP_003524078.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3
           [Glycine max] gi|255633042|gb|ACU16876.1| unknown
           [Glycine max]
          Length = 236

 Score =  355 bits (911), Expect = 1e-95
 Identities = 173/228 (75%), Positives = 204/228 (89%)
 Frame = -2

Query: 914 AKRWLPLEANPEIMNQFIWGLGLPEVEAEFCDVYGLDDELLEMVPKPVIAVLFLYPITAE 735
           AKRWLPLEANPE+MNQF+WGLGLP  EAE CDV+GLD+ELLEMVPKPV+AVLFLYPITA+
Sbjct: 10  AKRWLPLEANPEVMNQFLWGLGLPLDEAECCDVFGLDEELLEMVPKPVLAVLFLYPITAK 69

Query: 734 SEAERMLEKDSVNKDVSDKVYFLKQTVGNACGTIGLLHAVGNLSSEIKFVEESYLDKFFK 555
           SE ER L++++  KD S KVYF+KQTVGNACGTIGLLHA+GN++SE+K VE S+ DKFFK
Sbjct: 70  SEEER-LQQENEKKDYSSKVYFMKQTVGNACGTIGLLHALGNITSEVKLVEGSFFDKFFK 128

Query: 554 STANMDPLERAVFLEKDREMEAAHSVAATAGDTEAPNINERIDTHFICFTCVDGDLYELD 375
           STA+MDPL+RAVFLE DREME AHSVAATAGDT A   ++ +DTHFICF CVDG+LYELD
Sbjct: 129 STASMDPLQRAVFLENDREMEVAHSVAATAGDTVA---SDNVDTHFICFACVDGELYELD 185

Query: 374 GRKSQPISHGASSPSSLLQDATKVIKAMIQKNPNSLNFNVIALSRRTE 231
           GRKS PISHG SSPS+LL+DA KVI++MIQKNP SLNFNVIA+S++++
Sbjct: 186 GRKSGPISHGPSSPSTLLRDAAKVIQSMIQKNPGSLNFNVIAISKKSK 233


>ref|NP_001242611.1| uncharacterized protein LOC100816564 [Glycine max]
           gi|255645265|gb|ACU23130.1| unknown [Glycine max]
          Length = 236

 Score =  350 bits (899), Expect = 3e-94
 Identities = 171/228 (75%), Positives = 204/228 (89%)
 Frame = -2

Query: 914 AKRWLPLEANPEIMNQFIWGLGLPEVEAEFCDVYGLDDELLEMVPKPVIAVLFLYPITAE 735
           AKRWLPLEANP++MNQF+WGLGLP  EAE  DV+GLD+ELLEMVPKPV+AVLFLYPITA+
Sbjct: 10  AKRWLPLEANPDVMNQFLWGLGLPVDEAECGDVFGLDEELLEMVPKPVLAVLFLYPITAK 69

Query: 734 SEAERMLEKDSVNKDVSDKVYFLKQTVGNACGTIGLLHAVGNLSSEIKFVEESYLDKFFK 555
           SE ER L++++V KD S KVYF+KQTVGNACGTIGLLHA+GN++SE+K VE S+ DKFFK
Sbjct: 70  SEEER-LQQENVKKDYSSKVYFMKQTVGNACGTIGLLHALGNITSEVKLVEGSFFDKFFK 128

Query: 554 STANMDPLERAVFLEKDREMEAAHSVAATAGDTEAPNINERIDTHFICFTCVDGDLYELD 375
           STA+MDPL+RAVFLE DREME AHSVAATAGDT A   ++ +DTHFICF CVDG+LYELD
Sbjct: 129 STASMDPLQRAVFLENDREMEVAHSVAATAGDTVA---SDNVDTHFICFACVDGELYELD 185

Query: 374 GRKSQPISHGASSPSSLLQDATKVIKAMIQKNPNSLNFNVIALSRRTE 231
           GRKS PISHG SSPS+LL+DA KVI++MI+KNP SLNFNVIA+S++++
Sbjct: 186 GRKSGPISHGPSSPSTLLRDAAKVIQSMIRKNPGSLNFNVIAISKKSK 233


>ref|XP_004147225.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3-like
           [Cucumis sativus] gi|449514686|ref|XP_004164450.1|
           PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme
           L3-like [Cucumis sativus]
          Length = 242

 Score =  349 bits (895), Expect = 7e-94
 Identities = 169/226 (74%), Positives = 196/226 (86%)
 Frame = -2

Query: 911 KRWLPLEANPEIMNQFIWGLGLPEVEAEFCDVYGLDDELLEMVPKPVIAVLFLYPITAES 732
           KRWLPLEANP++MNQF+WGLGLPE EAE  DVYGLDDELL+MVPKPV+AVLFLYPIT +S
Sbjct: 14  KRWLPLEANPDVMNQFLWGLGLPEDEAECGDVYGLDDELLDMVPKPVLAVLFLYPITEKS 73

Query: 731 EAERMLEKDSVNKDVSDKVYFLKQTVGNACGTIGLLHAVGNLSSEIKFVEESYLDKFFKS 552
           E ER  ++    KD S++VYF+KQTVGNACGTIGLLHA+GN++SEIK  E S+LD+FFKS
Sbjct: 74  EEERRQQEKEAKKDYSNQVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSEGSFLDRFFKS 133

Query: 551 TANMDPLERAVFLEKDREMEAAHSVAATAGDTEAPNINERIDTHFICFTCVDGDLYELDG 372
           T +MDP+ERA FLEKD EME AHSVAATAGDT AP   E++DTHFICF+CVDG LYELDG
Sbjct: 134 TKSMDPIERAAFLEKDDEMEVAHSVAATAGDTTAP---EKVDTHFICFSCVDGKLYELDG 190

Query: 371 RKSQPISHGASSPSSLLQDATKVIKAMIQKNPNSLNFNVIALSRRT 234
           RK++PISHG SSP+SLLQDA +VIK MI  NP SLNFNVIA+S+RT
Sbjct: 191 RKTEPISHGPSSPNSLLQDAARVIKDMISDNPESLNFNVIAISKRT 236


>ref|XP_002532357.1| Ubiquitin carboxyl-terminal hydrolase isozyme L3, putative [Ricinus
           communis] gi|223527944|gb|EEF30030.1| Ubiquitin
           carboxyl-terminal hydrolase isozyme L3, putative
           [Ricinus communis]
          Length = 236

 Score =  348 bits (893), Expect = 1e-93
 Identities = 171/228 (75%), Positives = 200/228 (87%)
 Frame = -2

Query: 914 AKRWLPLEANPEIMNQFIWGLGLPEVEAEFCDVYGLDDELLEMVPKPVIAVLFLYPITAE 735
           AKRWLPLEANP++MNQF+WGLG+ E EAE  DVYGLD+ELLEMVPKPV+AVLFLYPIT +
Sbjct: 10  AKRWLPLEANPDVMNQFLWGLGVVESEAECYDVYGLDEELLEMVPKPVLAVLFLYPITPQ 69

Query: 734 SEAERMLEKDSVNKDVSDKVYFLKQTVGNACGTIGLLHAVGNLSSEIKFVEESYLDKFFK 555
           SE ER L+++ V ++ S+KVYF+KQTVGNACGTIGLLHAVGN++SEI  VEES+LD+FFK
Sbjct: 70  SEEER-LQQEGVKQEPSNKVYFMKQTVGNACGTIGLLHAVGNITSEINLVEESFLDRFFK 128

Query: 554 STANMDPLERAVFLEKDREMEAAHSVAATAGDTEAPNINERIDTHFICFTCVDGDLYELD 375
           STA MDP+ERA FLE DREME AHSVAAT GDTEA   ++ +DTHFICFTCV+G L+ELD
Sbjct: 129 STARMDPMERATFLENDREMEVAHSVAATGGDTEA---SDNVDTHFICFTCVEGKLFELD 185

Query: 374 GRKSQPISHGASSPSSLLQDATKVIKAMIQKNPNSLNFNVIALSRRTE 231
           GRKS PISHGASS  SLLQDA KVI+ MIQKNP+SLNFNVIA+S++ E
Sbjct: 186 GRKSGPISHGASSQGSLLQDAAKVIRDMIQKNPDSLNFNVIAISKKAE 233


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