BLASTX nr result

ID: Coptis23_contig00018184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018184
         (1750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262877.2| PREDICTED: uncharacterized protein LOC100240...   198   4e-48
emb|CBI17891.3| unnamed protein product [Vitis vinifera]              188   4e-45
ref|XP_002309003.1| predicted protein [Populus trichocarpa] gi|2...   187   8e-45
ref|XP_002325253.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-44
ref|NP_001067264.1| Os12g0613500 [Oryza sativa Japonica Group] g...   170   1e-39

>ref|XP_002262877.2| PREDICTED: uncharacterized protein LOC100240988 [Vitis vinifera]
          Length = 425

 Score =  198 bits (503), Expect = 4e-48
 Identities = 117/235 (49%), Positives = 152/235 (64%), Gaps = 2/235 (0%)
 Frame = +1

Query: 895  RKDESDKKDVLTLEDNVVSIDKKGSKKRKRMACEVDGSVLNVKTLSKEEKQARXXXXXXX 1074
            ++ +S   +  T+E++ +  D K SKKRKR+ACE   S    K + ++ K+         
Sbjct: 223  KRTDSKSSNSQTVEEDALDEDDKVSKKRKRLACEESNSQPADKVVVEKSKRQ-------- 274

Query: 1075 XXXXXXXXSDGHAGKKFKTENGQVDPKKSEEISIDK--KLDVSTEFKKTPKGSDGQAKAD 1248
                             KTE+     K+S+ I + K  K  + ++  +  KG   + + D
Sbjct: 275  -----------------KTESS----KESDGIKLLKEVKESLGSDLDEGDKGKVAK-QLD 312

Query: 1249 LHASGDLEESGKEGSAPQKSANKQQNGSAEPKTRIPFQRVKIDEVEFADHRLQDNSYWAK 1428
            + A+G L+++G++ +A +K    QQN S EPKT   FQRVKIDEVEFAD RLQDNSYWAK
Sbjct: 313  VQANGILDKNGEKSTA-RKQVKNQQN-STEPKTVNAFQRVKIDEVEFADQRLQDNSYWAK 370

Query: 1429 GGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSDEE 1593
            GGADSGYGAKAQE+LGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSD++
Sbjct: 371  GGADSGYGAKAQEILGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSDDD 425


>emb|CBI17891.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  188 bits (477), Expect = 4e-45
 Identities = 109/233 (46%), Positives = 138/233 (59%)
 Frame = +1

Query: 895  RKDESDKKDVLTLEDNVVSIDKKGSKKRKRMACEVDGSVLNVKTLSKEEKQARXXXXXXX 1074
            ++ +S   +  T+E++ +  D K SKKRKR+ACE   S                      
Sbjct: 288  KRTDSKSSNSQTVEEDALDEDDKVSKKRKRLACEESNS---------------------- 325

Query: 1075 XXXXXXXXSDGHAGKKFKTENGQVDPKKSEEISIDKKLDVSTEFKKTPKGSDGQAKADLH 1254
                                      + ++++ ++K     TE  K         + D+ 
Sbjct: 326  --------------------------QPADKVVVEKSKRQKTEIAK---------QLDVQ 350

Query: 1255 ASGDLEESGKEGSAPQKSANKQQNGSAEPKTRIPFQRVKIDEVEFADHRLQDNSYWAKGG 1434
            A+G L+++G++ +A +K    QQN S EPKT   FQRVKIDEVEFAD RLQDNSYWAKGG
Sbjct: 351  ANGILDKNGEKSTA-RKQVKNQQN-STEPKTVNAFQRVKIDEVEFADQRLQDNSYWAKGG 408

Query: 1435 ADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSDEE 1593
            ADSGYGAKAQE+LGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSD++
Sbjct: 409  ADSGYGAKAQEILGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSDDD 461


>ref|XP_002309003.1| predicted protein [Populus trichocarpa] gi|222854979|gb|EEE92526.1|
            predicted protein [Populus trichocarpa]
          Length = 271

 Score =  187 bits (475), Expect = 8e-45
 Identities = 112/256 (43%), Positives = 145/256 (56%), Gaps = 26/256 (10%)
 Frame = +1

Query: 904  ESDKKDVLTLEDNVVSIDK-----KGSKKRKRMACEVDGSVLNVKTLSKEEKQARXXXXX 1068
            E   KDV + E N  ++ K     K  K +K    + D    + K +  EE++ +     
Sbjct: 21   EEKSKDVSSSEGNKATVSKTENKPKDKKNKKNKLSDADADSNDNKNVKYEERKNKKDIVV 80

Query: 1069 XXXXXXXXXXSDGHAGKKFKTENGQVDPKKSEEISIDKKLDVSTEFKKTPKGSDGQAKAD 1248
                           GK  K ++ + D K SE+   DK+   S + K+ P   D    AD
Sbjct: 81   SENMSVETLDE----GKSNKVDSEKDDSKNSEKDVNDKENKSSKKRKRLPSEDDATQPAD 136

Query: 1249 LHA---------------------SGDLEESGKEGSAPQKSANKQQNGSAEPKTRIPFQR 1365
              A                     +G+LE++G++ S  QKS  K++NGS EPKT   FQR
Sbjct: 137  EKAVEDSKRRKMESSEEPKENGSANGNLEKNGEKSSL-QKSMKKEKNGSVEPKTVKHFQR 195

Query: 1366 VKIDEVEFADHRLQDNSYWAKGGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQ 1545
            VK+DEV F+D RL+DNSYWAK GA+ GYGAKAQ+VLGQVRGRDFRHEKTKKKRG+YRGGQ
Sbjct: 196  VKVDEVVFSDERLKDNSYWAKDGAEEGYGAKAQDVLGQVRGRDFRHEKTKKKRGTYRGGQ 255

Query: 1546 IDLQTHSIKFNYSDEE 1593
            IDLQ+HS KFNYSDE+
Sbjct: 256  IDLQSHSFKFNYSDED 271


>ref|XP_002325253.1| predicted protein [Populus trichocarpa] gi|222866687|gb|EEF03818.1|
            predicted protein [Populus trichocarpa]
          Length = 181

 Score =  186 bits (473), Expect = 1e-44
 Identities = 109/236 (46%), Positives = 138/236 (58%)
 Frame = +1

Query: 886  VDFRKDESDKKDVLTLEDNVVSIDKKGSKKRKRMACEVDGSVLNVKTLSKEEKQARXXXX 1065
            +D  K  S+K D   L+++V   + K SKKRKR++ E D                     
Sbjct: 2    LDEGKSNSEKDDSKNLKEDVNDKENKSSKKRKRLSSEDDA-------------------- 41

Query: 1066 XXXXXXXXXXXSDGHAGKKFKTENGQVDPKKSEEISIDKKLDVSTEFKKTPKGSDGQAKA 1245
                                        P+ + E +I+       E K+    S  + K 
Sbjct: 42   ----------------------------PQPANETAIE-------ESKRRKTESSEELKE 66

Query: 1246 DLHASGDLEESGKEGSAPQKSANKQQNGSAEPKTRIPFQRVKIDEVEFADHRLQDNSYWA 1425
            ++ A+G+LEE+G + SAPQKS  K++NGS EPKT   FQRVK+DEV F+D RL+DNSYWA
Sbjct: 67   NVQANGNLEENGAK-SAPQKSMMKEKNGSVEPKTVKHFQRVKVDEVVFSDERLKDNSYWA 125

Query: 1426 KGGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSDEE 1593
            K GA+ GYGAKAQEVLGQVRGR FRHEKTKKKRG+YRGGQIDLQ+HS KFNYSDE+
Sbjct: 126  KDGAEDGYGAKAQEVLGQVRGRGFRHEKTKKKRGTYRGGQIDLQSHSFKFNYSDED 181


>ref|NP_001067264.1| Os12g0613500 [Oryza sativa Japonica Group]
            gi|108862957|gb|ABA99396.2| SRP40, C-terminal domain
            containing protein, expressed [Oryza sativa Japonica
            Group] gi|113649771|dbj|BAF30283.1| Os12g0613500 [Oryza
            sativa Japonica Group] gi|215715236|dbj|BAG94987.1|
            unnamed protein product [Oryza sativa Japonica Group]
          Length = 448

 Score =  170 bits (431), Expect = 1e-39
 Identities = 93/156 (59%), Positives = 110/156 (70%)
 Frame = +1

Query: 1126 KTENGQVDPKKSEEISIDKKLDVSTEFKKTPKGSDGQAKADLHASGDLEESGKEGSAPQK 1305
            +TE G+     S+   + KK  +     +  +GS+  AK D  AS  L     E    + 
Sbjct: 300  ETEKGENGMPPSDNAVVGKKRKL-----EEVEGSNLPAKEDNTASQKLSNGSSEDDGAKP 354

Query: 1306 SANKQQNGSAEPKTRIPFQRVKIDEVEFADHRLQDNSYWAKGGADSGYGAKAQEVLGQVR 1485
              NK+Q  S+EPKT   FQRVK+++V+FAD RLQDNSYWAKGGADSGYGAKAQEVLGQVR
Sbjct: 355  --NKRQKKSSEPKTVNAFQRVKLEDVKFADDRLQDNSYWAKGGADSGYGAKAQEVLGQVR 412

Query: 1486 GRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSDEE 1593
            GR FRHEKTKKKRG+YRGGQIDLQTHSIKFN SD+E
Sbjct: 413  GRGFRHEKTKKKRGTYRGGQIDLQTHSIKFNDSDDE 448


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