BLASTX nr result

ID: Coptis23_contig00018150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018150
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595365.1| Fiber protein-like protein [Medicago truncat...   170   1e-40
ref|XP_002277324.1| PREDICTED: AT-rich interactive domain-contai...   170   1e-40
emb|CAN61485.1| hypothetical protein VITISV_043023 [Vitis vinifera]   170   1e-40
emb|CBI35803.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002324130.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40

>ref|XP_003595365.1| Fiber protein-like protein [Medicago truncatula]
            gi|355484413|gb|AES65616.1| Fiber protein-like protein
            [Medicago truncatula]
          Length = 844

 Score =  170 bits (431), Expect = 1e-40
 Identities = 71/83 (85%), Positives = 79/83 (95%)
 Frame = -1

Query: 403  YLLEYELAHDDVDGECCLLCHSCAAGDWVNCGICGQWAHFGCDRRKGHGAFKDYAKTDGL 224
            YLLEYELAHDDVDGECCLLCHS AAGDWVNCG+CG+WAHFGCDRR+G GAFKDYAKTDGL
Sbjct: 762  YLLEYELAHDDVDGECCLLCHSSAAGDWVNCGMCGEWAHFGCDRRQGLGAFKDYAKTDGL 821

Query: 223  EYICPQCSMTNFSRKPKKSANGY 155
            EY+CP CSM+NFS+K +K+ANGY
Sbjct: 822  EYVCPHCSMSNFSKKSQKTANGY 844


>ref|XP_002277324.1| PREDICTED: AT-rich interactive domain-containing protein 4 [Vitis
           vinifera] gi|297738501|emb|CBI27746.3| unnamed protein
           product [Vitis vinifera]
          Length = 739

 Score =  170 bits (431), Expect = 1e-40
 Identities = 72/83 (86%), Positives = 78/83 (93%)
 Frame = -1

Query: 403 YLLEYELAHDDVDGECCLLCHSCAAGDWVNCGICGQWAHFGCDRRKGHGAFKDYAKTDGL 224
           YLLEYELAHDDVDGECCLLCHS AAGDWVNCGICG+WAHFGCDRR+G GAFKDYAKTDGL
Sbjct: 657 YLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGL 716

Query: 223 EYICPQCSMTNFSRKPKKSANGY 155
           EYICP CS+TNF +K +K+ANGY
Sbjct: 717 EYICPHCSITNFQKKSQKTANGY 739


>emb|CAN61485.1| hypothetical protein VITISV_043023 [Vitis vinifera]
          Length = 106

 Score =  170 bits (431), Expect = 1e-40
 Identities = 72/83 (86%), Positives = 78/83 (93%)
 Frame = -1

Query: 403 YLLEYELAHDDVDGECCLLCHSCAAGDWVNCGICGQWAHFGCDRRKGHGAFKDYAKTDGL 224
           YLLEYELAHDDVDGECCLLCHS AAGDWVNCGICG+WAHFGCDRR+G GAFKDYAKTDGL
Sbjct: 24  YLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGL 83

Query: 223 EYICPQCSMTNFSRKPKKSANGY 155
           EYICP CS+TNF +K +K+ANGY
Sbjct: 84  EYICPHCSITNFQKKSQKTANGY 106


>emb|CBI35803.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  170 bits (430), Expect = 1e-40
 Identities = 72/84 (85%), Positives = 78/84 (92%)
 Frame = -1

Query: 403 YLLEYELAHDDVDGECCLLCHSCAAGDWVNCGICGQWAHFGCDRRKGHGAFKDYAKTDGL 224
           YLLEYELAHDDVDGECCLLCHS AAGDWVNCGICG+WAHFGCDRR+G GAFKDYAKTDGL
Sbjct: 663 YLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGL 722

Query: 223 EYICPQCSMTNFSRKPKKSANGYS 152
           EYICPQCS+TNF +K  K+ NG+S
Sbjct: 723 EYICPQCSVTNFKKKANKAPNGFS 746


>ref|XP_002324130.1| predicted protein [Populus trichocarpa] gi|222865564|gb|EEF02695.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  168 bits (426), Expect = 4e-40
 Identities = 71/83 (85%), Positives = 77/83 (92%)
 Frame = -1

Query: 403 YLLEYELAHDDVDGECCLLCHSCAAGDWVNCGICGQWAHFGCDRRKGHGAFKDYAKTDGL 224
           YLLEYELAHDDVDGECCLLCHS AAGDWVNCGICG+WAHFGCDRR+G GAFKDYAKTDGL
Sbjct: 663 YLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGL 722

Query: 223 EYICPQCSMTNFSRKPKKSANGY 155
           EYICP CS+ NF +K +K+ANGY
Sbjct: 723 EYICPHCSIANFKKKSQKNANGY 745


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