BLASTX nr result

ID: Coptis23_contig00018147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018147
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69255.1| hypothetical protein VITISV_038799 [Vitis vinifera]    73   3e-11
ref|XP_002281710.1| PREDICTED: putative clathrin assembly protei...    72   5e-11
ref|XP_002521908.1| clathrin assembly protein, putative [Ricinus...    70   1e-10
ref|XP_003631794.1| PREDICTED: putative clathrin assembly protei...    70   2e-10
ref|XP_002444488.1| hypothetical protein SORBIDRAFT_07g022710 [S...    68   7e-10

>emb|CAN69255.1| hypothetical protein VITISV_038799 [Vitis vinifera]
          Length = 385

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 47/139 (33%), Positives = 72/139 (51%)
 Frame = -1

Query: 435 AEMSLHVLHKATSQGEELDSYFEFCRDIGVLNASEFPRVEKXXXXXXXXXXXXXXEVKNR 256
           A M+L VL KAT+QG+ L  YFE C+++GV NAS+F +VEK              +++  
Sbjct: 236 ANMALKVLRKATAQGDRLSLYFELCKNLGVRNASKFSKVEK----------IPQEDIREL 285

Query: 255 EMNTTSLINVEEANLEQKQSREMEKLKEGSVKLMKTIITSNWVVFDDEFKTDEERRGSVD 76
           E     ++  +   + QK S E  K  EGS    KT+I+  W  FD++ + ++E  G+ D
Sbjct: 286 EQIINGVLEDKAIVVRQKGSIEEGKGTEGS---PKTVISKKWERFDEQLRGNKEGTGAPD 342

Query: 75  GVGTSNYTNPFAASMSIPP 19
           G       NP  A+ +  P
Sbjct: 343 GGKMIVAQNPSTATCNSRP 361


>ref|XP_002281710.1| PREDICTED: putative clathrin assembly protein At1g25240 [Vitis
           vinifera] gi|297737574|emb|CBI26775.3| unnamed protein
           product [Vitis vinifera]
          Length = 385

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 47/139 (33%), Positives = 72/139 (51%)
 Frame = -1

Query: 435 AEMSLHVLHKATSQGEELDSYFEFCRDIGVLNASEFPRVEKXXXXXXXXXXXXXXEVKNR 256
           A M+L VL KAT+QG+ L  YFE C+++GV NAS+F +VEK              +++  
Sbjct: 236 ANMALKVLRKATAQGDRLSLYFELCKNLGVRNASKFSKVEK----------IPQEDIREL 285

Query: 255 EMNTTSLINVEEANLEQKQSREMEKLKEGSVKLMKTIITSNWVVFDDEFKTDEERRGSVD 76
           E     ++  +   + QK S E  K  EGS    KT+I+  W  FD++ + ++E  G+ D
Sbjct: 286 EQIINGVLEDKAIVVRQKGSIEEGKGTEGS---PKTVISKKWERFDEQLRGNKEGIGAPD 342

Query: 75  GVGTSNYTNPFAASMSIPP 19
           G       NP  A+ +  P
Sbjct: 343 GGKMIVAQNPSTATCNSRP 361


>ref|XP_002521908.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223538946|gb|EEF40544.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 379

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
 Frame = -1

Query: 435 AEMSLHVLHKATSQGEELDSYFEFCRDIGVLNASEFPRVEKXXXXXXXXXXXXXXEVKNR 256
           A +SL VL KA +QGE+L  YFEFCRD GV NA E P+V K               V  +
Sbjct: 231 ATLSLKVLQKAMNQGEDLALYFEFCRDFGVFNAMEVPKVTKIPDEDIKDLERIINGVYEK 290

Query: 255 EMNTTSLINVEE-ANLEQKQSREMEKL--KEGSVKLMKTIITSNWVVFDDEFK 106
           +       N++E  N   K + ++  +  K+ +++ +KTIIT  W VFD+E K
Sbjct: 291 K-------NIDENDNNNNKNNNKIVAIDEKKEAIQKLKTIITDKWEVFDEELK 336


>ref|XP_003631794.1| PREDICTED: putative clathrin assembly protein At1g25240-like [Vitis
           vinifera]
          Length = 373

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 46/145 (31%), Positives = 65/145 (44%)
 Frame = -1

Query: 435 AEMSLHVLHKATSQGEELDSYFEFCRDIGVLNASEFPRVEKXXXXXXXXXXXXXXEVKNR 256
           A M+L +L KA+ Q E+L  Y  FCR IGV N S+FP VE+               V   
Sbjct: 233 AAMALEILQKASQQREQLALYLNFCRKIGVFNESKFPEVEQIPKKDIQKLERIVSGVSEN 292

Query: 255 EMNTTSLINVEEANLEQKQSREMEKLKEGSVKLMKTIITSNWVVFDDEFKTDEERRGSVD 76
           +      I  +E   E K             +++KTIIT  W VFD++  ++     ++ 
Sbjct: 293 QATVVKTIEPKEEQEEPK-------------RVLKTIITETWEVFDEDPDSNGIGFSNIP 339

Query: 75  GVGTSNYTNPFAASMSIPPV*YGSK 1
           G  T    NP AA +  PP  +G K
Sbjct: 340 GKTTVG-QNPSAAPLKFPPNTHGQK 363


>ref|XP_002444488.1| hypothetical protein SORBIDRAFT_07g022710 [Sorghum bicolor]
           gi|241940838|gb|EES13983.1| hypothetical protein
           SORBIDRAFT_07g022710 [Sorghum bicolor]
          Length = 402

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
 Frame = -1

Query: 423 LHVLHKATSQGEELDSYFEFCRDIGVLNASEFPRVEKXXXXXXXXXXXXXXEVKNREMNT 244
           + VL KA  Q  +L SYF+ CR +GVLNA+EFP VE+              ++++ E   
Sbjct: 269 MRVLRKAAEQSAQLSSYFDLCRGLGVLNAAEFPAVER----------VPDDDIRDLEKII 318

Query: 243 TSLINVEEANLEQKQSREMEKL---KEGSVKLMKTIITSNWVVFDDEFKTDEERRGSVDG 73
            S +  E    E+++ +E + L    E +    +T++T  WVVFDD+   D    G+  G
Sbjct: 319 MSHVVEESGKEEEEEEKETKALVVAVEETRPASETVVTKEWVVFDDD-DDDNAAAGARPG 377

Query: 72  VGTSNYTNPFAAS 34
                Y NPF A+
Sbjct: 378 -HFGGYVNPFVAA 389


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