BLASTX nr result

ID: Coptis23_contig00018130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018130
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298708.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
gb|AFK42834.1| unknown [Lotus japonicus]                               63   4e-08
gb|AFK33954.1| unknown [Lotus japonicus]                               63   4e-08
ref|NP_001235294.1| uncharacterized protein LOC100527126 [Glycin...    63   4e-08
gb|AFK42323.1| unknown [Medicago truncatula]                           62   8e-08

>ref|XP_002298708.1| predicted protein [Populus trichocarpa] gi|222845966|gb|EEE83513.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -3

Query: 566 ICLSEFVDGDGVRILPKCKHGFHVKCIEGWLSS 468
           IC+SEFV GD VRILPKC HGFHVKCI+ WLSS
Sbjct: 119 ICISEFVHGDRVRILPKCSHGFHVKCIDEWLSS 151


>gb|AFK42834.1| unknown [Lotus japonicus]
          Length = 107

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -3

Query: 566 ICLSEFVDGDGVRILPKCKHGFHVKCIEGWLSS 468
           ICLSEF DG+ VR+LPKC HGFHV+CI+ WLSS
Sbjct: 20  ICLSEFTDGEKVRVLPKCNHGFHVRCIDKWLSS 52


>gb|AFK33954.1| unknown [Lotus japonicus]
          Length = 229

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -3

Query: 566 ICLSEFVDGDGVRILPKCKHGFHVKCIEGWLSS 468
           ICLSEF DG+ VR+LPKC HGFHV+CI+ WLSS
Sbjct: 142 ICLSEFTDGEKVRVLPKCNHGFHVRCIDKWLSS 174


>ref|NP_001235294.1| uncharacterized protein LOC100527126 [Glycine max]
           gi|255631612|gb|ACU16173.1| unknown [Glycine max]
          Length = 232

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = -3

Query: 566 ICLSEFVDGDGVRILPKCKHGFHVKCIEGWLSS 468
           ICLSEF +GD VRILPKC HGFHV+CI+ WLSS
Sbjct: 146 ICLSEFANGDKVRILPKCNHGFHVRCIDKWLSS 178


>gb|AFK42323.1| unknown [Medicago truncatula]
          Length = 228

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -3

Query: 566 ICLSEFVDGDGVRILPKCKHGFHVKCIEGWLSS 468
           ICLSEF +GD VR+LPKC HGFHV+CI+ WLSS
Sbjct: 138 ICLSEFTNGDKVRLLPKCNHGFHVRCIDKWLSS 170


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