BLASTX nr result

ID: Coptis23_contig00018128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018128
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300264.1| predicted protein [Populus trichocarpa] gi|2...   321   2e-85
ref|XP_002275234.1| PREDICTED: ankyrin repeat domain-containing ...   315   1e-83
ref|XP_002451459.1| hypothetical protein SORBIDRAFT_04g002300 [S...   303   4e-80
gb|ACF80469.2| unknown [Zea mays] gi|413926728|gb|AFW66660.1| hy...   301   2e-79
ref|XP_002517389.1| aberrant large forked product, putative [Ric...   301   2e-79

>ref|XP_002300264.1| predicted protein [Populus trichocarpa] gi|222847522|gb|EEE85069.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  321 bits (823), Expect = 2e-85
 Identities = 162/254 (63%), Positives = 190/254 (74%), Gaps = 10/254 (3%)
 Frame = -2

Query: 987 LETEYDSWEDPDDGSNSDYESEKXXXXXXXXXXXXXXXXXXXXVVTRTQ----------Y 838
           LET++  WEDPDDGS SDY+ E                      VT T           Y
Sbjct: 1   LETKHGVWEDPDDGSGSDYDQEDEEEAKENDLDFDSNWEEEKNSVTATSTVTNSTTENNY 60

Query: 837 EDDYIKEIEQLLTPDERAILEQNDAPVFSKISTTKWGLLQTLALSAQIPFMDKLLVQGLP 658
            +D +KE+EQLL P+ERAI +QN +P   KIST KW  LQTLALS QI FMDKLL  GL 
Sbjct: 61  GEDLVKEVEQLLGPEERAIFQQNASPNLRKISTAKWNPLQTLALSGQIKFMDKLLDDGLD 120

Query: 657 IDAPDKDGLTALHKAVIGKREPVISHLLRKGANPHVRDKDGATPLHYAVQVGAMQTVKLL 478
           ID  D DG TALHKA+IGK+E VISHLLRKGA+PH+RD+DGA+PLHYAVQVGAMQTVKLL
Sbjct: 121 IDDQDNDGFTALHKAIIGKKEAVISHLLRKGASPHIRDRDGASPLHYAVQVGAMQTVKLL 180

Query: 477 IKYKVDVNAEDTEGWTPLHVAIQSRCRDIAKVLLVNGADKTRRTKDGMSVLDLALCYGKD 298
           +KY+VDVNA D EGWTPLH+A+QSR RDIAKVLLVNGADKTRRTKDGM+ LDL+LC+GKD
Sbjct: 181 LKYEVDVNAADNEGWTPLHIAVQSRNRDIAKVLLVNGADKTRRTKDGMTPLDLSLCFGKD 240

Query: 297 FKSYELTKLVKLVP 256
           FKS+++ KL+K++P
Sbjct: 241 FKSFDIAKLLKVLP 254


>ref|XP_002275234.1| PREDICTED: ankyrin repeat domain-containing protein EMB506,
           chloroplastic [Vitis vinifera]
           gi|147786877|emb|CAN75542.1| hypothetical protein
           VITISV_022633 [Vitis vinifera]
          Length = 322

 Score =  315 bits (808), Expect = 1e-83
 Identities = 166/258 (64%), Positives = 186/258 (72%), Gaps = 8/258 (3%)
 Frame = -2

Query: 993 ASLETEYDSWEDPDDGSNSDYESEKXXXXXXXXXXXXXXXXXXXXVVTRT--------QY 838
           +SL+    +WEDPDDGS S+Y+ E                       T T        +Y
Sbjct: 64  SSLQPRTRAWEDPDDGSGSEYDDEDEEMEEYDLDFESDWEEEKDASATVTGVNKSTARKY 123

Query: 837 EDDYIKEIEQLLTPDERAILEQNDAPVFSKISTTKWGLLQTLALSAQIPFMDKLLVQGLP 658
           E D +KE+ QLL P+ER IL+QN AP   KIST KW  L TLALS QI  MDKLL  GL 
Sbjct: 124 EADLVKEVVQLLGPEERQILQQNAAPNLEKISTAKWSPLHTLALSGQIHSMDKLLANGLD 183

Query: 657 IDAPDKDGLTALHKAVIGKREPVISHLLRKGANPHVRDKDGATPLHYAVQVGAMQTVKLL 478
           ID  DKDGLTALH+A+IGK+E VISHLLRKGANPHVRD+DGATPLHYAVQVGAMQTVKLL
Sbjct: 184 IDNVDKDGLTALHRAIIGKKEAVISHLLRKGANPHVRDRDGATPLHYAVQVGAMQTVKLL 243

Query: 477 IKYKVDVNAEDTEGWTPLHVAIQSRCRDIAKVLLVNGADKTRRTKDGMSVLDLALCYGKD 298
           IKY VD+NA D EGWTPLH+AIQSR R IAK LLVNGADKTRR +DG + LDL+LCYGKD
Sbjct: 244 IKYNVDINAADNEGWTPLHIAIQSRNRIIAKRLLVNGADKTRRNQDGKTPLDLSLCYGKD 303

Query: 297 FKSYELTKLVKLVPAGID 244
           FKSYEL KL+KLVPA  D
Sbjct: 304 FKSYELAKLLKLVPANRD 321


>ref|XP_002451459.1| hypothetical protein SORBIDRAFT_04g002300 [Sorghum bicolor]
            gi|241931290|gb|EES04435.1| hypothetical protein
            SORBIDRAFT_04g002300 [Sorghum bicolor]
          Length = 299

 Score =  303 bits (777), Expect = 4e-80
 Identities = 159/277 (57%), Positives = 191/277 (68%), Gaps = 2/277 (0%)
 Frame = -2

Query: 1077 PLKTTFKRVPTPWIKPITT--CVVYSTLAGASLETEYDSWEDPDDGSNSDYESEKXXXXX 904
            PL+    R P P  +P+    C   +    A+       WE+PDDGS SDYE +      
Sbjct: 22   PLRAAAPRPPPPLCRPLPRMLCAGLNPPPRAASSDGNVFWEEPDDGSGSDYEDD---GPE 78

Query: 903  XXXXXXXXXXXXXXXVVTRTQYEDDYIKEIEQLLTPDERAILEQNDAPVFSKISTTKWGL 724
                           +    Q E D  +EIE LLTP+E+AIL+Q++ P  +KIS+ KW  
Sbjct: 79   QRRALRFPSSSPSSRLEAARQQEQDLRREIELLLTPEEKAILDQHETPDVTKISSPKWHP 138

Query: 723  LQTLALSAQIPFMDKLLVQGLPIDAPDKDGLTALHKAVIGKREPVISHLLRKGANPHVRD 544
            L + AL+ QIP MDKLL  G+ I+  D+DG T LHKAVIGK+E VISHLLRKGANPHVRD
Sbjct: 139  LHSYALALQIPLMDKLLDSGVDINLLDRDGFTCLHKAVIGKKEAVISHLLRKGANPHVRD 198

Query: 543  KDGATPLHYAVQVGAMQTVKLLIKYKVDVNAEDTEGWTPLHVAIQSRCRDIAKVLLVNGA 364
            +DGATPLHYAVQ GA+QTVKLLIKYKVDVN  D +GWTPLH+AIQSR RDI KVLLVNG 
Sbjct: 199  RDGATPLHYAVQAGALQTVKLLIKYKVDVNVADNDGWTPLHLAIQSRNRDIVKVLLVNGV 258

Query: 363  DKTRRTKDGMSVLDLALCYGKDFKSYELTKLVKLVPA 253
            DKTRRTKDG + LDL+LC+G+DFKSY+L KLVKL+PA
Sbjct: 259  DKTRRTKDGRTALDLSLCFGRDFKSYDLAKLVKLIPA 295


>gb|ACF80469.2| unknown [Zea mays] gi|413926728|gb|AFW66660.1| hypothetical protein
           ZEAMMB73_120984 [Zea mays]
          Length = 312

 Score =  301 bits (772), Expect = 2e-79
 Identities = 152/241 (63%), Positives = 181/241 (75%)
 Frame = -2

Query: 966 WEDPDDGSNSDYESEKXXXXXXXXXXXXXXXXXXXXVVTRTQYEDDYIKEIEQLLTPDER 787
           WE+PDDGS SDYE +                     +    Q E D  +EIE LLTP+E+
Sbjct: 61  WEEPDDGSGSDYEDD---GPEQRRALRFPSSSPSYRLEASAQQEQDLRREIELLLTPEEK 117

Query: 786 AILEQNDAPVFSKISTTKWGLLQTLALSAQIPFMDKLLVQGLPIDAPDKDGLTALHKAVI 607
           A L+Q++ P  ++IS+ KW  L + AL+ QIP MDKLL  G+ I+  D+DG T+LHKAVI
Sbjct: 118 ATLDQHETPDVTRISSPKWHPLHSYALALQIPLMDKLLNSGVDINLVDRDGFTSLHKAVI 177

Query: 606 GKREPVISHLLRKGANPHVRDKDGATPLHYAVQVGAMQTVKLLIKYKVDVNAEDTEGWTP 427
           GK+E VISHLLRKGANPHVRD+DGATPLHYAVQ GA+QTVKLLIKYKVDVN  D +GWTP
Sbjct: 178 GKKEAVISHLLRKGANPHVRDRDGATPLHYAVQAGALQTVKLLIKYKVDVNVADNDGWTP 237

Query: 426 LHVAIQSRCRDIAKVLLVNGADKTRRTKDGMSVLDLALCYGKDFKSYELTKLVKLVPAGI 247
           LH+AIQSR RDIAKVLLVNGADKTRRTKDG + LDL+LC+G+DFKSY+L KLVKL+PA  
Sbjct: 238 LHLAIQSRNRDIAKVLLVNGADKTRRTKDGRTALDLSLCFGRDFKSYDLAKLVKLIPANR 297

Query: 246 D 244
           D
Sbjct: 298 D 298


>ref|XP_002517389.1| aberrant large forked product, putative [Ricinus communis]
            gi|223543400|gb|EEF44931.1| aberrant large forked
            product, putative [Ricinus communis]
          Length = 343

 Score =  301 bits (771), Expect = 2e-79
 Identities = 165/297 (55%), Positives = 190/297 (63%), Gaps = 33/297 (11%)
 Frame = -2

Query: 1035 KPITTCVVYSTLAGASLETEYDSWEDPDDGSNSDYESEKXXXXXXXXXXXXXXXXXXXXV 856
            + +TTC V S  A  S E     WEDPDDGS SDY+  +                     
Sbjct: 47   RKLTTCRVESKWAYPS-ERLPGVWEDPDDGSGSDYDEVEELEENDMDYESDWEEETYAKS 105

Query: 855  VTRT---------------------------------QYEDDYIKEIEQLLTPDERAILE 775
             TR                                   YE+D  KEI QLL P+ERAIL+
Sbjct: 106  TTRIVDYSTSNNYEEDSEEATYVASTSTTTVRNSTSKNYEEDLSKEIIQLLQPEERAILQ 165

Query: 774  QNDAPVFSKISTTKWGLLQTLALSAQIPFMDKLLVQGLPIDAPDKDGLTALHKAVIGKRE 595
            QN      K+ST KW  LQTLALS QI FMDKLL  GL ID+ DKDGLTALHKA++GK+E
Sbjct: 166  QNATYNLDKLSTAKWKPLQTLALSGQIRFMDKLLADGLDIDSVDKDGLTALHKAIVGKKE 225

Query: 594  PVISHLLRKGANPHVRDKDGATPLHYAVQVGAMQTVKLLIKYKVDVNAEDTEGWTPLHVA 415
             VISHLLRKGANPHV+D+DGA+ LHYAVQ+GA+QTVKLLIKY VD+N  D EGWTPLHVA
Sbjct: 226  AVISHLLRKGANPHVKDRDGASSLHYAVQIGALQTVKLLIKYNVDINVADNEGWTPLHVA 285

Query: 414  IQSRCRDIAKVLLVNGADKTRRTKDGMSVLDLALCYGKDFKSYELTKLVKLVPAGID 244
            +Q+R RDI KVLLVNGADK R+ KDGM+ +DL LCYGKDFKSY+L KLVK+VPA  D
Sbjct: 286  VQTRKRDIVKVLLVNGADKNRKNKDGMTPVDLCLCYGKDFKSYDLAKLVKVVPANRD 342


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