BLASTX nr result
ID: Coptis23_contig00018123
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00018123 (340 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267786.1| PREDICTED: 21 kDa protein [Vitis vinifera] 71 8e-11 ref|XP_002321006.1| predicted protein [Populus trichocarpa] gi|2... 70 2e-10 ref|XP_002523085.1| 21 kDa protein precursor, putative [Ricinus ... 64 1e-08 ref|XP_004160554.1| PREDICTED: 21 kDa protein-like [Cucumis sati... 60 2e-07 ref|XP_003591526.1| 21 kDa protein [Medicago truncatula] gi|3554... 59 5e-07 >ref|XP_002267786.1| PREDICTED: 21 kDa protein [Vitis vinifera] Length = 196 Score = 71.2 bits (173), Expect = 8e-11 Identities = 35/74 (47%), Positives = 48/74 (64%) Frame = -3 Query: 224 MKSVLASVVLILFVSMTKCGGYSMSSIGDSYVRDACRVTRYRKLCIRSLRSFSNSARRSP 45 M + S+ ++ + G S S G++Y+R+AC VTRYR LCI SL SFS++A+RSP Sbjct: 1 MAGLHVSLSFLVLAGLMNLGMLSASENGNNYLREACSVTRYRDLCIHSLASFSHTAKRSP 60 Query: 44 RRWAVAAVFVTMNE 3 RWA A V VT+ E Sbjct: 61 SRWARAGVSVTIGE 74 >ref|XP_002321006.1| predicted protein [Populus trichocarpa] gi|222861779|gb|EEE99321.1| predicted protein [Populus trichocarpa] Length = 195 Score = 70.1 bits (170), Expect = 2e-10 Identities = 34/70 (48%), Positives = 46/70 (65%) Frame = -3 Query: 212 LASVVLILFVSMTKCGGYSMSSIGDSYVRDACRVTRYRKLCIRSLRSFSNSARRSPRRWA 33 ++ ++ LF+S C S GD+YVR+AC VTRY LC+ SL SFS++A RSP +WA Sbjct: 4 ISILITFLFLSWLTCATSRGSDNGDTYVREACSVTRYHDLCMHSLASFSHTAGRSPSKWA 63 Query: 32 VAAVFVTMNE 3 A V VT+ E Sbjct: 64 RAGVSVTIGE 73 >ref|XP_002523085.1| 21 kDa protein precursor, putative [Ricinus communis] gi|223537647|gb|EEF39270.1| 21 kDa protein precursor, putative [Ricinus communis] Length = 197 Score = 63.9 bits (154), Expect = 1e-08 Identities = 33/74 (44%), Positives = 42/74 (56%) Frame = -3 Query: 224 MKSVLASVVLILFVSMTKCGGYSMSSIGDSYVRDACRVTRYRKLCIRSLRSFSNSARRSP 45 M+ VL+ + + GD+YVRDAC VTRY+ LC+ SL SFS A+RSP Sbjct: 1 MRPAYVFFVLLFLSWAANAISWGSKTNGDTYVRDACSVTRYQDLCLHSLSSFSQVAKRSP 60 Query: 44 RRWAVAAVFVTMNE 3 WA A V VT+ E Sbjct: 61 SIWARAGVSVTIGE 74 >ref|XP_004160554.1| PREDICTED: 21 kDa protein-like [Cucumis sativus] Length = 197 Score = 60.1 bits (144), Expect = 2e-07 Identities = 27/45 (60%), Positives = 37/45 (82%) Frame = -3 Query: 137 SYVRDACRVTRYRKLCIRSLRSFSNSARRSPRRWAVAAVFVTMNE 3 SYV++ACRVTR++ LCI+SL FS++A+RSP +WA A V VT+ E Sbjct: 31 SYVQEACRVTRHQDLCIQSLSPFSSAAKRSPTKWARAGVSVTITE 75 >ref|XP_003591526.1| 21 kDa protein [Medicago truncatula] gi|355480574|gb|AES61777.1| 21 kDa protein [Medicago truncatula] Length = 225 Score = 58.5 bits (140), Expect = 5e-07 Identities = 29/66 (43%), Positives = 42/66 (63%) Frame = -3 Query: 200 VLILFVSMTKCGGYSMSSIGDSYVRDACRVTRYRKLCIRSLRSFSNSARRSPRRWAVAAV 21 +L+ F+ + + + G + VR+AC+VTRY+ LC+RSL FS SA R P +WA A V Sbjct: 10 LLLAFIFIPYLASQLVFAKGRNNVREACKVTRYQNLCMRSLAPFSYSAGRGPSKWARAGV 69 Query: 20 FVTMNE 3 VT+ E Sbjct: 70 SVTIGE 75