BLASTX nr result

ID: Coptis23_contig00018123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018123
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267786.1| PREDICTED: 21 kDa protein [Vitis vinifera]         71   8e-11
ref|XP_002321006.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002523085.1| 21 kDa protein precursor, putative [Ricinus ...    64   1e-08
ref|XP_004160554.1| PREDICTED: 21 kDa protein-like [Cucumis sati...    60   2e-07
ref|XP_003591526.1| 21 kDa protein [Medicago truncatula] gi|3554...    59   5e-07

>ref|XP_002267786.1| PREDICTED: 21 kDa protein [Vitis vinifera]
          Length = 196

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/74 (47%), Positives = 48/74 (64%)
 Frame = -3

Query: 224 MKSVLASVVLILFVSMTKCGGYSMSSIGDSYVRDACRVTRYRKLCIRSLRSFSNSARRSP 45
           M  +  S+  ++   +   G  S S  G++Y+R+AC VTRYR LCI SL SFS++A+RSP
Sbjct: 1   MAGLHVSLSFLVLAGLMNLGMLSASENGNNYLREACSVTRYRDLCIHSLASFSHTAKRSP 60

Query: 44  RRWAVAAVFVTMNE 3
            RWA A V VT+ E
Sbjct: 61  SRWARAGVSVTIGE 74


>ref|XP_002321006.1| predicted protein [Populus trichocarpa] gi|222861779|gb|EEE99321.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/70 (48%), Positives = 46/70 (65%)
 Frame = -3

Query: 212 LASVVLILFVSMTKCGGYSMSSIGDSYVRDACRVTRYRKLCIRSLRSFSNSARRSPRRWA 33
           ++ ++  LF+S   C     S  GD+YVR+AC VTRY  LC+ SL SFS++A RSP +WA
Sbjct: 4   ISILITFLFLSWLTCATSRGSDNGDTYVREACSVTRYHDLCMHSLASFSHTAGRSPSKWA 63

Query: 32  VAAVFVTMNE 3
            A V VT+ E
Sbjct: 64  RAGVSVTIGE 73


>ref|XP_002523085.1| 21 kDa protein precursor, putative [Ricinus communis]
           gi|223537647|gb|EEF39270.1| 21 kDa protein precursor,
           putative [Ricinus communis]
          Length = 197

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/74 (44%), Positives = 42/74 (56%)
 Frame = -3

Query: 224 MKSVLASVVLILFVSMTKCGGYSMSSIGDSYVRDACRVTRYRKLCIRSLRSFSNSARRSP 45
           M+      VL+          +   + GD+YVRDAC VTRY+ LC+ SL SFS  A+RSP
Sbjct: 1   MRPAYVFFVLLFLSWAANAISWGSKTNGDTYVRDACSVTRYQDLCLHSLSSFSQVAKRSP 60

Query: 44  RRWAVAAVFVTMNE 3
             WA A V VT+ E
Sbjct: 61  SIWARAGVSVTIGE 74


>ref|XP_004160554.1| PREDICTED: 21 kDa protein-like [Cucumis sativus]
          Length = 197

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/45 (60%), Positives = 37/45 (82%)
 Frame = -3

Query: 137 SYVRDACRVTRYRKLCIRSLRSFSNSARRSPRRWAVAAVFVTMNE 3
           SYV++ACRVTR++ LCI+SL  FS++A+RSP +WA A V VT+ E
Sbjct: 31  SYVQEACRVTRHQDLCIQSLSPFSSAAKRSPTKWARAGVSVTITE 75


>ref|XP_003591526.1| 21 kDa protein [Medicago truncatula] gi|355480574|gb|AES61777.1| 21
           kDa protein [Medicago truncatula]
          Length = 225

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/66 (43%), Positives = 42/66 (63%)
 Frame = -3

Query: 200 VLILFVSMTKCGGYSMSSIGDSYVRDACRVTRYRKLCIRSLRSFSNSARRSPRRWAVAAV 21
           +L+ F+ +       + + G + VR+AC+VTRY+ LC+RSL  FS SA R P +WA A V
Sbjct: 10  LLLAFIFIPYLASQLVFAKGRNNVREACKVTRYQNLCMRSLAPFSYSAGRGPSKWARAGV 69

Query: 20  FVTMNE 3
            VT+ E
Sbjct: 70  SVTIGE 75


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