BLASTX nr result

ID: Coptis23_contig00018121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018121
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529250.1| conserved hypothetical protein [Ricinus comm...    79   9e-13
ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|2...    79   2e-12
ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|NP_001031993.1| uncharacterized protein [Arabidopsis thalian...    66   1e-08
ref|XP_002865566.1| hypothetical protein ARALYDRAFT_494819 [Arab...    65   2e-08

>ref|XP_002529250.1| conserved hypothetical protein [Ricinus communis]
           gi|223531286|gb|EEF33128.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 141

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 47/134 (35%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
 Frame = -3

Query: 692 MGWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTEN 513
           M WF   RRGPEWK                    +F IVIL +WL +Y DY+ ++  +  
Sbjct: 1   MEWFYPRRRGPEWKQGWTGQTLGSISIPPPPLLVIFGIVILLLWLSQYTDYKAQLHHSAI 60

Query: 512 NFHIFXXXXXXXXXXXVRCLSDNWR-LLRLDQGDSSHQ-----DGCS-PWGVAIXXXXXX 354
           NF +F           +   S NW    RL Q  S  +     +G S PWG+A       
Sbjct: 61  NFQLFLFLLPVLLILLIASYSTNWMPYFRLRQPRSGRESVRSAEGSSQPWGIAAFVAVLL 120

Query: 353 VMISYQSSFHSRWF 312
           V++SYQSSFHS+WF
Sbjct: 121 VLLSYQSSFHSKWF 134


>ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|222849390|gb|EEE86937.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 45/133 (33%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
 Frame = -3

Query: 692 MGWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTEN 513
           M WF   RRGPEWK                    +F IVI  +WL  Y  Y+ ++  +  
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTMGSVSSPPLPLLAIFGIVISLLWLSHYTGYKAQLHHSAI 60

Query: 512 NFHIFXXXXXXXXXXXVRCLSDNWRL---LRLDQGDSS-HQDGCSPWGVAIXXXXXXVMI 345
           N  IF           +   S NW L   LR  Q DS     G  PWG+AI      +++
Sbjct: 61  NLQIFLVLLPILLILFMASYSTNWLLYYRLRSSQHDSDPRSSGSFPWGIAIFVVVLLMLL 120

Query: 344 SYQSSFHSRWFKL 306
           SY+S+FHS+WF L
Sbjct: 121 SYRSTFHSKWFGL 133


>ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|222849131|gb|EEE86678.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 44/131 (33%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
 Frame = -3

Query: 692 MGWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTEN 513
           M WF   RRGPEWK                    +F IVI  +WL  Y  Y  ++  +  
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTVASMSTPPFPLLAIFGIVISLLWLSHYTGYEAQLRHSAV 60

Query: 512 NFHIFXXXXXXXXXXXVRCLSDNWRL---LRLDQGDSSHQDGCS-PWGVAIXXXXXXVMI 345
           N  IF           +   S NW L   LR    DS+ +   S PWG+A+      +++
Sbjct: 61  NLQIFLFLLPILLILFMASYSTNWLLYYRLRDSPPDSAPRSTSSFPWGIAVFVVLLLMLL 120

Query: 344 SYQSSFHSRWF 312
           SYQSSFHS+WF
Sbjct: 121 SYQSSFHSKWF 131


>ref|NP_001031993.1| uncharacterized protein [Arabidopsis thaliana]
           gi|98962135|gb|ABF59397.1| unknown protein [Arabidopsis
           thaliana] gi|149944379|gb|ABR46232.1| At5g42146
           [Arabidopsis thaliana] gi|332007390|gb|AED94773.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 137

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
 Frame = -3

Query: 692 MGWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTEN 513
           MGWF+++RRG  WK                    + AI+ L ++L  Y  Y+ E+EKT  
Sbjct: 1   MGWFIKERRGGSWKRGWLEETLLTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAA 60

Query: 512 NFHIFXXXXXXXXXXXVRCLSDNWRLL-------RLDQGDSSHQDGCSPWGVAIXXXXXX 354
           N  +F           +  LS   RLL       R +Q  S   +G  PWGV +      
Sbjct: 61  NLKLFMLFLPILFVFVLVSLSFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLL 120

Query: 353 VMISYQSSFHSRWF 312
           +++S QS FHS W+
Sbjct: 121 LLVSKQSYFHSLWY 134


>ref|XP_002865566.1| hypothetical protein ARALYDRAFT_494819 [Arabidopsis lyrata subsp.
           lyrata] gi|297311401|gb|EFH41825.1| hypothetical protein
           ARALYDRAFT_494819 [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
 Frame = -3

Query: 692 MGWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTEN 513
           MGWF+++RRG  WK                    + AI+ L ++L  Y  Y+ E+EKT  
Sbjct: 1   MGWFIKERRGGSWKRGWLEETLLTTSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAA 60

Query: 512 NFHIFXXXXXXXXXXXVRCLSDNWRLL-------RLDQGDSSHQDGCSPWGVAIXXXXXX 354
           N  +F           +  L+   RLL       R +Q  S   +G  PWGV +      
Sbjct: 61  NLKLFMLFLPILFVFLLLSLNFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLL 120

Query: 353 VMISYQSSFHSRWF 312
           +++S QS FHS W+
Sbjct: 121 LLVSKQSYFHSLWY 134


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