BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018112
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635406.1| PREDICTED: putative nuclear matrix constitue...   102   4e-20
ref|XP_003549990.1| PREDICTED: putative nuclear matrix constitue...    94   2e-17
ref|XP_003524701.1| PREDICTED: putative nuclear matrix constitue...    94   2e-17
dbj|BAI67718.1| nuclear matrix constituent protein 2 [Daucus car...    92   4e-17
ref|XP_004143416.1| PREDICTED: putative nuclear matrix constitue...    91   8e-17

>ref|XP_003635406.1| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like [Vitis vinifera]
           gi|296085718|emb|CBI29518.3| unnamed protein product
           [Vitis vinifera]
          Length = 1117

 Score =  102 bits (253), Expect = 4e-20
 Identities = 44/57 (77%), Positives = 55/57 (96%)
 Frame = +1

Query: 58  VGDDSLWVKLRDAGFDEESVKRRDKASLIAYIAKLEAEIFDYQHHMGLLLMEKKDWA 228
           + DD++W +LRDAGFDEES+KRRDKA+LIAYIAKLEAEIFD+QHHMGLL++E+K+WA
Sbjct: 24  LSDDAIWKRLRDAGFDEESIKRRDKAALIAYIAKLEAEIFDHQHHMGLLILERKEWA 80


>ref|XP_003549990.1| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like [Glycine max]
          Length = 1050

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/57 (71%), Positives = 52/57 (91%)
 Frame = +1

Query: 58  VGDDSLWVKLRDAGFDEESVKRRDKASLIAYIAKLEAEIFDYQHHMGLLLMEKKDWA 228
           + D+ +W +LRDAGFDEES+K +DKA+LIAYIAKLEAEI+D+QHHMGLL++EKKD A
Sbjct: 26  LSDEQIWKRLRDAGFDEESIKHKDKAALIAYIAKLEAEIYDHQHHMGLLILEKKDLA 82


>ref|XP_003524701.1| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like [Glycine max]
          Length = 1048

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/57 (71%), Positives = 52/57 (91%)
 Frame = +1

Query: 58  VGDDSLWVKLRDAGFDEESVKRRDKASLIAYIAKLEAEIFDYQHHMGLLLMEKKDWA 228
           + D+ +W +LRDAGFDEES+K +DKA+LIAYIAKLEAEI+D+QHHMGLL++EKKD A
Sbjct: 26  LSDEQIWKRLRDAGFDEESIKHKDKAALIAYIAKLEAEIYDHQHHMGLLILEKKDLA 82


>dbj|BAI67718.1| nuclear matrix constituent protein 2 [Daucus carota]
          Length = 927

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/72 (55%), Positives = 58/72 (80%)
 Frame = +1

Query: 10  EKDRLGLMTRRSSPMVVGDDSLWVKLRDAGFDEESVKRRDKASLIAYIAKLEAEIFDYQH 189
           + ++  + + R S   + DD +W +L++AGFDE+S+KRRDKASLIAYI KLEAEI+D+Q+
Sbjct: 10  QSEKTTVTSSRVSRSSMSDDDIWKRLQEAGFDEDSIKRRDKASLIAYITKLEAEIYDHQY 69

Query: 190 HMGLLLMEKKDW 225
            MGLL+ME+K+W
Sbjct: 70  QMGLLIMERKEW 81


>ref|XP_004143416.1| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like [Cucumis sativus]
          Length = 1025

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 39/57 (68%), Positives = 54/57 (94%)
 Frame = +1

Query: 58  VGDDSLWVKLRDAGFDEESVKRRDKASLIAYIAKLEAEIFDYQHHMGLLLMEKKDWA 228
           + D+++W +L++AGFDEES+KRRDKA+LIAYIAKLEAE+FD+QHHMGLL++E+K+ A
Sbjct: 30  LADEAIWRRLKEAGFDEESIKRRDKAALIAYIAKLEAEMFDHQHHMGLLILERKELA 86