BLASTX nr result
ID: Coptis23_contig00018109
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00018109 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAA63968.1| pom30 [Solanum tuberosum] 94 4e-30 ref|XP_002525270.1| voltage-dependent anion-selective channel, p... 88 4e-30 gb|ABB16970.1| POM30-like protein [Solanum tuberosum] 94 4e-30 ref|XP_002279650.2| PREDICTED: mitochondrial outer membrane prot... 96 1e-29 ref|XP_002306507.1| porin/voltage-dependent anion-selective chan... 94 2e-29 >emb|CAA63968.1| pom30 [Solanum tuberosum] Length = 276 Score = 94.0 bits (232), Expect(2) = 4e-30 Identities = 44/77 (57%), Positives = 54/77 (70%) Frame = -1 Query: 447 HSTLTTAANLNQSPVVDFSVTLGTANFAFGVESTYETKLGSLTKYNAGISVKSADYDASA 268 H+ +TA L QSP+VD SVTLGT FA G E++YET G L KY AGISV D A+ Sbjct: 114 HAAFSTAVGLKQSPIVDLSVTLGTPTFAIGAEASYETAEGKLAKYTAGISVTKPDSCAAI 173 Query: 267 VLADKGDTLKGSYVHYL 217 +L DKGDT+K SY+H+L Sbjct: 174 ILGDKGDTIKASYIHHL 190 Score = 62.4 bits (150), Expect(2) = 4e-30 Identities = 29/39 (74%), Positives = 33/39 (84%) Frame = -2 Query: 119 KRSAGVIEIARRFSTNENTITAGGSYAIDNLTVVKARLN 3 K+SA V EI RRFSTNENT T GGSYA+DNLT+VK +LN Sbjct: 194 KKSAAVGEITRRFSTNENTFTVGGSYAVDNLTIVKLKLN 232 >ref|XP_002525270.1| voltage-dependent anion-selective channel, putative [Ricinus communis] gi|223535428|gb|EEF37098.1| voltage-dependent anion-selective channel, putative [Ricinus communis] Length = 276 Score = 88.2 bits (217), Expect(2) = 4e-30 Identities = 42/77 (54%), Positives = 54/77 (70%) Frame = -1 Query: 447 HSTLTTAANLNQSPVVDFSVTLGTANFAFGVESTYETKLGSLTKYNAGISVKSADYDASA 268 H+T TTA L++SP VD S T+GT AFG E++Y+T G+ TKY +GISV D AS Sbjct: 114 HATFTTALALSKSPGVDVSATIGTPAIAFGAEASYDTTTGNFTKYTSGISVTKPDSCASI 173 Query: 267 VLADKGDTLKGSYVHYL 217 +L KGDT+K SY+HYL Sbjct: 174 ILGHKGDTIKASYLHYL 190 Score = 68.2 bits (165), Expect(2) = 4e-30 Identities = 32/39 (82%), Positives = 37/39 (94%) Frame = -2 Query: 119 KRSAGVIEIARRFSTNENTITAGGSYAIDNLTVVKARLN 3 K+SAGV EI+RRFSTNENTIT GGSYA+D+LTVVKA+LN Sbjct: 194 KKSAGVAEISRRFSTNENTITVGGSYAVDHLTVVKAKLN 232 >gb|ABB16970.1| POM30-like protein [Solanum tuberosum] Length = 275 Score = 94.0 bits (232), Expect(2) = 4e-30 Identities = 44/77 (57%), Positives = 54/77 (70%) Frame = -1 Query: 447 HSTLTTAANLNQSPVVDFSVTLGTANFAFGVESTYETKLGSLTKYNAGISVKSADYDASA 268 H+ +TA L QSP+VD SVTLGT FA G E++YET G L KY AGISV D A+ Sbjct: 113 HAAFSTAVGLKQSPIVDLSVTLGTPTFAIGAEASYETAEGKLAKYTAGISVTKPDSCAAI 172 Query: 267 VLADKGDTLKGSYVHYL 217 +L DKGDT+K SY+H+L Sbjct: 173 ILGDKGDTIKASYIHHL 189 Score = 62.4 bits (150), Expect(2) = 4e-30 Identities = 29/39 (74%), Positives = 33/39 (84%) Frame = -2 Query: 119 KRSAGVIEIARRFSTNENTITAGGSYAIDNLTVVKARLN 3 K+SA V EI RRFSTNENT T GGSYA+DNLT+VK +LN Sbjct: 193 KKSAAVGEITRRFSTNENTFTVGGSYAVDNLTIVKLKLN 231 >ref|XP_002279650.2| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa-like [Vitis vinifera] gi|147772866|emb|CAN75907.1| hypothetical protein VITISV_001975 [Vitis vinifera] gi|296087320|emb|CBI33694.3| unnamed protein product [Vitis vinifera] Length = 276 Score = 96.3 bits (238), Expect(2) = 1e-29 Identities = 46/77 (59%), Positives = 56/77 (72%) Frame = -1 Query: 447 HSTLTTAANLNQSPVVDFSVTLGTANFAFGVESTYETKLGSLTKYNAGISVKSADYDASA 268 H+TLTT+ LNQSP VD SVT+GT + AFG E+ Y+T G TKY AGISV D AS Sbjct: 114 HATLTTSVALNQSPAVDLSVTIGTPSIAFGAEAGYDTTSGCFTKYTAGISVAKPDSCASI 173 Query: 267 VLADKGDTLKGSYVHYL 217 +L DKGDT++ SYVH+L Sbjct: 174 ILGDKGDTIRASYVHHL 190 Score = 58.5 bits (140), Expect(2) = 1e-29 Identities = 29/39 (74%), Positives = 33/39 (84%) Frame = -2 Query: 119 KRSAGVIEIARRFSTNENTITAGGSYAIDNLTVVKARLN 3 K+SA V EI+RRFSTN+NT T GGSYAID LT VKA+LN Sbjct: 194 KKSAAVGEISRRFSTNDNTFTVGGSYAIDPLTNVKAKLN 232 >ref|XP_002306507.1| porin/voltage-dependent anion-selective channel protein [Populus trichocarpa] gi|222855956|gb|EEE93503.1| porin/voltage-dependent anion-selective channel protein [Populus trichocarpa] Length = 276 Score = 94.0 bits (232), Expect(2) = 2e-29 Identities = 44/77 (57%), Positives = 55/77 (71%) Frame = -1 Query: 447 HSTLTTAANLNQSPVVDFSVTLGTANFAFGVESTYETKLGSLTKYNAGISVKSADYDASA 268 H+T TTAA LNQSP +D + T+GT AFG E+ Y+T GS TKY AGISV D AS Sbjct: 114 HATFTTAAALNQSPAIDVTATIGTPTIAFGAEAGYDTTSGSFTKYTAGISVTKPDSYASI 173 Query: 267 VLADKGDTLKGSYVHYL 217 +L DKGD+++ SYVH+L Sbjct: 174 ILGDKGDSIRASYVHHL 190 Score = 60.1 bits (144), Expect(2) = 2e-29 Identities = 29/41 (70%), Positives = 35/41 (85%) Frame = -2 Query: 125 LPKRSAGVIEIARRFSTNENTITAGGSYAIDNLTVVKARLN 3 L K+SA V EI RRFS+NENT T GGS+A+D+LTVVKA+LN Sbjct: 192 LLKKSAAVGEITRRFSSNENTFTVGGSFAVDHLTVVKAKLN 232