BLASTX nr result

ID: Coptis23_contig00018102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018102
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511418.1| DNA binding protein, putative [Ricinus commu...   190   4e-46
ref|XP_002322161.1| predicted protein [Populus trichocarpa] gi|2...   185   1e-44
ref|XP_002318646.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44
ref|XP_002279841.1| PREDICTED: uncharacterized protein LOC100253...   171   1e-40
ref|XP_003525498.1| PREDICTED: uncharacterized protein LOC100811...   163   4e-38

>ref|XP_002511418.1| DNA binding protein, putative [Ricinus communis]
           gi|223550533|gb|EEF52020.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 173

 Score =  190 bits (482), Expect = 4e-46
 Identities = 99/159 (62%), Positives = 123/159 (77%), Gaps = 5/159 (3%)
 Frame = +3

Query: 3   KTVEKNRRVYMKGLSIKLASLIPKHH-NFSKDTLSQQDRLDHAEVYIKELRERVEMLKRK 179
           KTVE+NRR++MKGL  KLASLIP HH   SKDTLSQQD+LDHA  YIK L+ER+E LK+ 
Sbjct: 15  KTVERNRRIHMKGLCFKLASLIPSHHLKHSKDTLSQQDQLDHAAAYIKHLKERIEKLKKM 74

Query: 180 KQRMMRS----TRNEYGTKSVTVGVTLPVLELRETDSTLEVILVSSLDKNFMFYQVIGVL 347
           K++ MRS    + N     + T+G  LP++ELR+  S++EVIL+S L KNFM Y+VI ++
Sbjct: 75  KEQAMRSLATNSTNNNALDATTMGSRLPMIELRDLGSSIEVILISGLKKNFMLYEVITIV 134

Query: 348 EEEGADVVNASFSIVGDKVFHTIHSQVMSSRVGVEISRL 464
           EEEGA+VV+ASFS VGDKVFH IH+QV  SRVGVE SRL
Sbjct: 135 EEEGAEVVSASFSTVGDKVFHIIHAQVKISRVGVETSRL 173


>ref|XP_002322161.1| predicted protein [Populus trichocarpa] gi|222869157|gb|EEF06288.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  185 bits (469), Expect = 1e-44
 Identities = 101/165 (61%), Positives = 130/165 (78%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   KTVEKNRRVYMKGLSIKLASLIPKHHNF--SKDTLSQQDRLDHAEVYIKELRERVEMLKR 176
           KTVEKNRRV+MK L  KLASL+P HH F  SKD LSQQD+L+ A  YIK++RERVE LKR
Sbjct: 14  KTVEKNRRVHMKDLCFKLASLVP-HHFFKPSKDMLSQQDQLELAACYIKQMRERVEKLKR 72

Query: 177 KKQRMMRSTR-NEYGTKSVTVGVTLPVLELRETDSTLEVILVSSLDKNFMFYQVIGVLEE 353
            K++ + + + +  G  S+ +G+ LPV+ELR+  S++EV+LVS L+KNFMFY+VI VL +
Sbjct: 73  VKEQAITTIQTSRSGMTSMMIGLRLPVIELRDFGSSIEVVLVSGLNKNFMFYEVITVLSD 132

Query: 354 EGADVVNASFSIVGDKVFHTIHSQVMSSRVGVEISRLSARLNELL 488
           EGA+VV+AS+S VGDKVFHTIH+QV  SRVGVE SR+  RL EL+
Sbjct: 133 EGAEVVSASYSTVGDKVFHTIHAQVRISRVGVETSRVWERLQELI 177


>ref|XP_002318646.1| predicted protein [Populus trichocarpa] gi|222859319|gb|EEE96866.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  184 bits (468), Expect = 2e-44
 Identities = 99/165 (60%), Positives = 130/165 (78%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   KTVEKNRRVYMKGLSIKLASLIPKH-HNFSKDTLSQQDRLDHAEVYIKELRERVEMLKR- 176
           KTVE+NRR++MK L +KLASL+P H    SKD LSQQD+L+ A  YIK+LRERVE LKR 
Sbjct: 14  KTVERNRRIHMKDLCLKLASLLPPHLFKPSKDMLSQQDQLELAACYIKQLRERVEGLKRV 73

Query: 177 KKQRMMRSTRNEYGTK-SVTVGVTLPVLELRETDSTLEVILVSSLDKNFMFYQVIGVLEE 353
           K+++ + +TR     K S+ +G+ LPV+ELR+  ST+EV+L+S L+KNFMFY+VI VL +
Sbjct: 74  KEEQAITTTRTSSSAKTSMMIGLRLPVVELRDFGSTIEVVLISGLNKNFMFYEVINVLSD 133

Query: 354 EGADVVNASFSIVGDKVFHTIHSQVMSSRVGVEISRLSARLNELL 488
           EGA+V++AS+S VGDKVFHTIH+QV  SRVGVE SR+  RL EL+
Sbjct: 134 EGAEVISASYSTVGDKVFHTIHAQVRISRVGVETSRVCERLQELI 178


>ref|XP_002279841.1| PREDICTED: uncharacterized protein LOC100253569 [Vitis vinifera]
           gi|297733800|emb|CBI15047.3| unnamed protein product
           [Vitis vinifera]
          Length = 178

 Score =  171 bits (434), Expect = 1e-40
 Identities = 92/165 (55%), Positives = 124/165 (75%), Gaps = 2/165 (1%)
 Frame = +3

Query: 3   KTVEKNRRVYMKGLSIKLASLIPKHH-NFSKDTLSQQDRLDHAEVYIKELRERVEMLKRK 179
           KT E+NRR++MK L  KL+SLIP +    SKD LSQQD+L+ A  YIK+L+ER+E LK +
Sbjct: 14  KTTERNRRIHMKSLCFKLSSLIPPNQFKTSKDMLSQQDQLEQAANYIKQLKERIEELKGR 73

Query: 180 KQRMMR-STRNEYGTKSVTVGVTLPVLELRETDSTLEVILVSSLDKNFMFYQVIGVLEEE 356
           K+   R +  N     +V +G+ LPV++LR+  S+LEV+L+S L+KNFM Y+VI VLEEE
Sbjct: 74  KELATRVAGTNNNLIDAVMIGLRLPVIDLRDLGSSLEVMLISGLNKNFMLYEVISVLEEE 133

Query: 357 GADVVNASFSIVGDKVFHTIHSQVMSSRVGVEISRLSARLNELLF 491
           GA+VV+AS S VGDKVFH++H+QV  SRVGVE SR+  RL EL++
Sbjct: 134 GAEVVSASVSTVGDKVFHSLHAQVKISRVGVETSRVWQRLQELIY 178


>ref|XP_003525498.1| PREDICTED: uncharacterized protein LOC100811485 [Glycine max]
          Length = 191

 Score =  163 bits (413), Expect = 4e-38
 Identities = 85/165 (51%), Positives = 119/165 (72%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   KTVEKNRRVYMKGLSIKLASLIPKHH-NFSKDTLSQQDRLDHAEVYIKELRERVEMLKRK 179
           KT+E+NRR++MK L  KL S IP +    +KD LSQQD+LD A  YIK L+ER+E LK +
Sbjct: 17  KTIERNRRIHMKSLCFKLVSTIPSNDLKPTKDMLSQQDQLDLATTYIKRLKERIEKLKGE 76

Query: 180 KQRMMRS--TRNEYGTKSVTVGVTLPVLELRETDSTLEVILVSSLDKNFMFYQVIGVLEE 353
           K+++M    + N+       +G  LP+LE+++  S +EV+L+S L+KNFM Y+VI VLEE
Sbjct: 77  KEKIMNMMMSSNQNNNSIFNIGSQLPLLEIKDLGSGIEVMLISGLNKNFMLYEVISVLEE 136

Query: 354 EGADVVNASFSIVGDKVFHTIHSQVMSSRVGVEISRLSARLNELL 488
           EGA+VV A+FS V DK+F+T+H+QV  SRVGVE +R+  RL EL+
Sbjct: 137 EGAEVVTANFSTVADKIFYTVHAQVKISRVGVEPTRVYQRLQELI 181


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