BLASTX nr result

ID: Coptis23_contig00018086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018086
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298988.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002518967.1| conserved hypothetical protein [Ricinus comm...    59   3e-07
ref|XP_002317646.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_004145887.1| PREDICTED: transmembrane protein 120 homolog...    59   5e-07
ref|XP_002276903.2| PREDICTED: transmembrane protein 120 homolog...    57   2e-06

>ref|XP_002298988.1| predicted protein [Populus trichocarpa] gi|222846246|gb|EEE83793.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/55 (54%), Positives = 43/55 (78%)
 Frame = +2

Query: 305 EEAGRLVELAKELQESASSFISKSTSEEQSLRQRALSINSNIQKLRSSIPQGQKL 469
           EE GR+VE AKELQE+A+S I+KST +EQS+RQ+ALS+ S+I++  S + +   L
Sbjct: 5   EEVGRVVEQAKELQETAASLIAKSTHDEQSVRQKALSLESSIRRCSSLLDRSNHL 59


>ref|XP_002518967.1| conserved hypothetical protein [Ricinus communis]
           gi|223541954|gb|EEF43500.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 360

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/47 (61%), Positives = 41/47 (87%)
 Frame = +2

Query: 305 EEAGRLVELAKELQESASSFISKSTSEEQSLRQRALSINSNIQKLRS 445
           EE  R+VE AK++QE+A+S IS+ST++EQSLRQRALS+ S+I++ RS
Sbjct: 15  EEVERVVEQAKQVQEAAASLISRSTNDEQSLRQRALSLESSIRRCRS 61


>ref|XP_002317646.1| predicted protein [Populus trichocarpa] gi|222860711|gb|EEE98258.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/55 (52%), Positives = 43/55 (78%)
 Frame = +2

Query: 305 EEAGRLVELAKELQESASSFISKSTSEEQSLRQRALSINSNIQKLRSSIPQGQKL 469
           EE  R+VE AKELQE+A+S I+KS+ +EQSLRQ+ALS+ S++++ RS + +   L
Sbjct: 25  EEVARVVEQAKELQETAASLIAKSSHDEQSLRQKALSLESSVRRCRSLLNRNNGL 79


>ref|XP_004145887.1| PREDICTED: transmembrane protein 120 homolog [Cucumis sativus]
           gi|449524416|ref|XP_004169219.1| PREDICTED:
           transmembrane protein 120 homolog [Cucumis sativus]
          Length = 365

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/47 (59%), Positives = 41/47 (87%)
 Frame = +2

Query: 305 EEAGRLVELAKELQESASSFISKSTSEEQSLRQRALSINSNIQKLRS 445
           +E GR+VELAKEL +SA+S IS++  +EQSLRQRALS++S++++L S
Sbjct: 16  DEVGRVVELAKELHDSAASLISRTAIDEQSLRQRALSLDSSVRRLCS 62


>ref|XP_002276903.2| PREDICTED: transmembrane protein 120 homolog isoform 1 [Vitis
           vinifera]
          Length = 371

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/53 (54%), Positives = 41/53 (77%)
 Frame = +2

Query: 293 GEYSEEAGRLVELAKELQESASSFISKSTSEEQSLRQRALSINSNIQKLRSSI 451
           G   E+   +VE AKELQ++ASS IS+++ EEQ+LR+ ALS++SNI +LRS I
Sbjct: 12  GNIDEQVSGVVEQAKELQDAASSHISRTSVEEQALRKSALSLDSNIHRLRSLI 64


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