BLASTX nr result

ID: Coptis23_contig00018070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018070
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vi...   144   3e-32
gb|ACE63260.1| histidine kinase 2 [Betula pendula]                    123   6e-26
emb|CBI28424.3| unnamed protein product [Vitis vinifera]              110   5e-22
emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]   109   1e-21
ref|XP_002321181.1| histidine kinase cytokinin receptor [Populus...    89   2e-15

>ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vinifera]
          Length = 1272

 Score =  144 bits (364), Expect = 3e-32
 Identities = 107/280 (38%), Positives = 152/280 (54%), Gaps = 19/280 (6%)
 Frame = -1

Query: 878 MSIVSIAWVILKLPRLLLRICRWVLVKMALNGKLPSPANRLSWWLK----KEKVQGF--- 720
           MS  ++A V LKL RL+L+ICRWVL+KM+LN KL   + RL   LK    KE + G    
Sbjct: 1   MSFSAVAGVFLKLSRLILKICRWVLLKMSLNCKLSGFSGRLPANLKLKKSKEPLHGSNCV 60

Query: 719 -KWRSRAYLILWVFLVSCVVGFLLF-SPNGNGVSGRKHRGTELLWEEKARILQVRLNVSK 546
            KWR R +L+LW  L+  ++G + F S    G   RK +  +L  EEKARIL    NVSK
Sbjct: 61  RKWR-RKFLLLW--LLGVIIGLICFLSVLNAGALSRKEKTPDLC-EEKARILLEHFNVSK 116

Query: 545 DQLISMASLFMRSEQNQSLACFDELGLQMPSTDGIACALEELSSDMVRFDTWKKWSTKKL 366
           +QL S+ASLF  S+Q  SL C  E G +MP  + IACAL+   S    F+     + + L
Sbjct: 117 NQLHSLASLFAESDQIASLECTKEAGFEMPPGNAIACALKVPCSQNQEFEKQHDQAAESL 176

Query: 365 EGMDQCLVQHDSVPEKLEGTSVKGALVPTVLSQNTLVSLSYD----------QICGKEQC 216
           E  DQC V+ +++P KL+  S+ G    +  SQ+T  S+S D            C KE C
Sbjct: 177 EPNDQCPVRDENIPGKLD-LSLLGDQSASFSSQSTSSSVSLDGQSGEKIRALANCTKEHC 235

Query: 215 KGHHKPFMKMCCCLLFGIMLIWRVSHCQEGFWINQQWKHV 96
           +      +K+   +L G+++  ++S      W N++ K V
Sbjct: 236 ENFSLCLVKVGWWVLVGMVVSCKLSGSHVKLWGNRKQKLV 275



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
 Frame = -1

Query: 734 KVQGFKWRSRAYLILWVFLVSCVVGFLLFSPNGNGVSGRKHRGTELLWEEKARILQVRLN 555
           KV G KWR +  +I    L+  ++   LF      ++ R+      + +E+AR+LQ + N
Sbjct: 306 KVAG-KWRKKLLIIF--VLLGVIISIWLFWHLNKDINLRRRETLTNMCDERARMLQDQFN 362

Query: 554 VSKDQLISMASLFMRSEQNQSLACFDE---------LGLQMPSTDGIACALEELSSDMVR 402
           VS + + ++A L       +  +  D+            + P T G+A AL+ L S+   
Sbjct: 363 VSMNHVHALAILVSTFHHGKHPSAIDQKTFGEYTERTAFERPLTSGVAYALKVLHSEREH 422

Query: 401 FDTWKKWSTKKLEGMDQCLVQHDSVPEKLEGTSVKGALVPTVLSQNTLVSL-SYDQICGK 225
           F+    W+ KK+E  DQ LVQ D + E L+ + ++    P + SQ T+  + S D + GK
Sbjct: 423 FEKEHGWTIKKMETEDQTLVQ-DCILENLDPSPIQDEYAPVIFSQETVSHIVSIDMMSGK 481

Query: 224 E 222
           E
Sbjct: 482 E 482


>gb|ACE63260.1| histidine kinase 2 [Betula pendula]
          Length = 1260

 Score =  123 bits (309), Expect = 6e-26
 Identities = 100/302 (33%), Positives = 140/302 (46%), Gaps = 21/302 (6%)
 Frame = -1

Query: 848 LKLPRLLLRICRWVLVKMALNGKLPSPANRLSWWLK----KEKVQG----FKWRSRAYLI 693
           LKL RLL+ I RWV+VKM+L+ KL     RL    K    KE++ G     KWR R  L 
Sbjct: 11  LKLSRLLVGIHRWVMVKMSLDCKLSGFNGRLPACSKLKKTKEQLHGPNSVRKWR-RKLLF 69

Query: 692 LWVFLVSCVVGFLLFSPNGNGVSGRKHRGTELLWEEKARILQVRLNVSKDQLISMASLFM 513
           LW+ +V  +    +FS    G    K    +   + KA+IL    NVS  QL ++ASLF 
Sbjct: 70  LWLIVVITLGSIWVFSSLNAGTLTGKDMTPDSC-DGKAQILLQHFNVSNSQLHALASLFS 128

Query: 512 RSEQNQSLACFDELGLQMPSTDGIACALEELSSDMVRFDTWKKWSTKKLEGMDQCLVQHD 333
            S+Q  SL C   LG +MP ++ IACAL    SDM  F    +W  +  E  DQC V+ +
Sbjct: 129 ESDQITSLQCSKNLGPKMPLSNSIACALRLPCSDMQEFHKQHRWIAENDEPKDQCSVRDE 188

Query: 332 SVPEKLEGTSVKGALVPTVLSQNTLVSLSYDQICG-------------KEQCKGHHKPFM 192
            +P K + + +    +P      T    +  QICG             KE C G    F+
Sbjct: 189 FIPRKFDLSMLDNTPMPFSSQSGTSSISANHQICGKNILLSSALADCAKEHC-GSFYTFL 247

Query: 191 KMCCCLLFGIMLIWRVSHCQEGFWINQQWKHVMXXXXXXXXXXXXXXXXXQSSVKGDGKW 12
           K+   LL  +++  ++S     FW NQ+ K ++                  S  KG GKW
Sbjct: 248 KVSWLLLVVVIVSRKMSPLHLNFWRNQK-KKLLHQLPVAQQQQQKQQQLAHSPPKGAGKW 306

Query: 11  RR 6
           R+
Sbjct: 307 RK 308



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
 Frame = -1

Query: 719 KWRSRAYLILWVFLVSCVVGFLLFSPNGNGVSGRKHRGTELLWEEKARILQVRLNVSKDQ 540
           KWR + +L+L+V L    +   LF      +  R+      + +E+AR+LQ + NVS + 
Sbjct: 305 KWRKK-FLLLFV-LNGITMSIWLFWYMNQEIILRREETLANMCDERARMLQDQFNVSMNH 362

Query: 539 LISMASLFMRSEQNQSLACFDE---------LGLQMPSTDGIACALEELSSDMVRFDTWK 387
           + ++A L       +  +  D+            + P T G+A AL+   S   +F+   
Sbjct: 363 VHALAILVSTFHHGKHPSAIDQKTFGEYTERTAFERPLTSGVAYALKVPHSMREQFERQH 422

Query: 386 KWSTKKLEGMDQCLVQHDSVPEKLEGTSVKGALVPTVLSQNTLVSL-SYDQICGKE 222
            W+ KK+E  DQ LVQ + +PE L+   ++    P + SQ T+  + S D + GKE
Sbjct: 423 GWTIKKMETEDQTLVQ-ECIPENLDPAPIQDEYAPVIFSQETVSHIVSIDMMSGKE 477


>emb|CBI28424.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score =  110 bits (275), Expect = 5e-22
 Identities = 90/253 (35%), Positives = 130/253 (51%), Gaps = 19/253 (7%)
 Frame = -1

Query: 797 MALNGKLPSPANRLSWWLK----KEKVQGF----KWRSRAYLILWVFLVSCVVGFLLF-S 645
           M+LN KL   + RL   LK    KE + G     KWR R +L+LW  L+  ++G + F S
Sbjct: 1   MSLNCKLSGFSGRLPANLKLKKSKEPLHGSNCVRKWR-RKFLLLW--LLGVIIGLICFLS 57

Query: 644 PNGNGVSGRKHRGTELLWEEKARILQVRLNVSKDQLISMASLFMRSEQNQSLACFDELGL 465
               G   RK +  +L  EEKARIL    NVSK+QL S+ASLF  S+Q  SL C  E G 
Sbjct: 58  VLNAGALSRKEKTPDLC-EEKARILLEHFNVSKNQLHSLASLFAESDQIASLECTKEAGF 116

Query: 464 QMPSTDGIACALEELSSDMVRFDTWKKWSTKKLEGMDQCLVQHDSVPEKLEGTSVKGALV 285
           +MP  + IACAL+   S    F+     + + LE  DQC V+ +++P KL+  S+ G   
Sbjct: 117 EMPPGNAIACALKVPCSQNQEFEKQHDQAAESLEPNDQCPVRDENIPGKLD-LSLLGDQS 175

Query: 284 PTVLSQNTLVSLSYD----------QICGKEQCKGHHKPFMKMCCCLLFGIMLIWRVSHC 135
            +  SQ+T  S+S D            C KE C+      +K+   +L G+++  ++S  
Sbjct: 176 ASFSSQSTSSSVSLDGQSGEKIRALANCTKEHCENFSLCLVKVGWWVLVGMVVSCKLSGS 235

Query: 134 QEGFWINQQWKHV 96
               W N++ K V
Sbjct: 236 HVKLWGNRKQKLV 248



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
 Frame = -1

Query: 734 KVQGFKWRSRAYLILWVFLVSCVVGFLLFSPNGNGVSGRKHRGTELLWEEKARILQVRLN 555
           KV G KWR +  +I    L+  ++   LF      ++ R+      + +E+AR+LQ + N
Sbjct: 279 KVAG-KWRKKLLIIF--VLLGVIISIWLFWHLNKDINLRRRETLTNMCDERARMLQDQFN 335

Query: 554 VSKDQLISMASLFMRSEQNQSLACFDE---------LGLQMPSTDGIACALEELSSDMVR 402
           VS + + ++A L       +  +  D+            + P T G+A AL+ L S+   
Sbjct: 336 VSMNHVHALAILVSTFHHGKHPSAIDQKTFGEYTERTAFERPLTSGVAYALKVLHSEREH 395

Query: 401 FDTWKKWSTKKLEGMDQCLVQHDSVPEKLEGTSVKGALVPTVLSQNTLVSL-SYDQICGK 225
           F+    W+ KK+E  DQ LVQ D + E L+ + ++    P + SQ T+  + S D + GK
Sbjct: 396 FEKEHGWTIKKMETEDQTLVQ-DCILENLDPSPIQDEYAPVIFSQETVSHIVSIDMMSGK 454

Query: 224 E 222
           E
Sbjct: 455 E 455


>emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]
          Length = 1400

 Score =  109 bits (272), Expect = 1e-21
 Identities = 93/282 (32%), Positives = 134/282 (47%), Gaps = 43/282 (15%)
 Frame = -1

Query: 812 WVLVKMALNGKLPSPANRLSWWLK----KEKVQGF----KWRSRAYLILWVFLVSCVVGF 657
           WVL+KM+LN KL   + RL   LK    KE + G     KWR R +L+LW  L+  ++G 
Sbjct: 37  WVLLKMSLNCKLSGFSGRLPANLKLKKSKEPLHGSNCVRKWR-RKFLLLW--LLGVIIGL 93

Query: 656 LLFSPNGNGVSGRKHRGTELLWEEKARILQVRLNVSKDQLISMASLFMRSEQNQ------ 495
           + F    N  +  +   T  L EEKARIL    NVSK+QL S+ASLF  S+Q Q      
Sbjct: 94  ICFLXVLNAGALSRKEKTPDLCEEKARILLEHFNVSKNQLHSLASLFAESDQGQWDIDHK 153

Query: 494 -------------------SLACFDELGLQMPSTDGIACALEELSSDMVRFDTWKKWSTK 372
                              SL C  E G +MP  + IACAL+   S    F+     + +
Sbjct: 154 ANVEFFKYWQKKYKDGKIASLECTKEAGFEMPPGNAIACALKVPCSQNQEFEKQHDQAAE 213

Query: 371 KLEGMDQCLVQHDSVPEKLEGTSVKGALVPTVLSQNTLVSLSYD----------QICGKE 222
            LE  DQC V+ +++P KL+  S+ G    +  SQ+T  S+S D            C KE
Sbjct: 214 SLEPNDQCPVRDENIPGKLD-LSLLGDQSASFSSQSTSSSVSLDGQSGEKIRALANCTKE 272

Query: 221 QCKGHHKPFMKMCCCLLFGIMLIWRVSHCQEGFWINQQWKHV 96
            C+      +K+   +L G+++  ++S      W N++ K V
Sbjct: 273 HCENFSLCLVKVGWWVLVGMVVSCKLSGSHVKLWGNRKQKLV 314



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
 Frame = -1

Query: 734 KVQGFKWRSRAYLILWVFLVSCVVGFLLFSPNGNGVSGRKHRGTELLWEEKARILQVRLN 555
           KV G KWR +  +I    L+  ++   LF      ++ R+      + +E+AR+LQ + N
Sbjct: 345 KVAG-KWRKKLLIIF--VLLGVIISIWLFWHLNKDINLRRRETLTNMCDERARMLQDQFN 401

Query: 554 VSKDQLISMASLFMRSEQNQSLACFDE---------LGLQMPSTDGIACALEELSSDMVR 402
           VS + + ++A L       +  +  D+            + P T G+A AL+ L S+   
Sbjct: 402 VSMNHVHALAILVSTFHHGKHPSAIDQKTFGEYTERTAFERPLTSGVAYALKVLHSEREH 461

Query: 401 FDTWKKWSTKKLEGMDQCLVQHDSVPEKLEGTSVKGALVPTVLSQNTLVSL-SYDQICGK 225
           F+    W+ KK+E  DQ LVQ D + E L+ + ++    P + SQ T+  + S D + GK
Sbjct: 462 FENEHGWTIKKMETEDQTLVQ-DCILENLDPSPIQDEYAPVIFSQETVSHIVSIDMMSGK 520

Query: 224 E 222
           E
Sbjct: 521 E 521


>ref|XP_002321181.1| histidine kinase cytokinin receptor [Populus trichocarpa]
           gi|222861954|gb|EEE99496.1| histidine kinase cytokinin
           receptor [Populus trichocarpa]
          Length = 1234

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 76/249 (30%), Positives = 119/249 (47%), Gaps = 11/249 (4%)
 Frame = -1

Query: 719 KWRSRAYLILWVFLVSCVVG--FLLFSPNGNGVSGRKHRGTELLWEEKARILQVRLNVSK 546
           KW+ R +L+LW   V+  +G  +LLFS + +G  GRK +  +   EE A++L    NVSK
Sbjct: 35  KWK-RKFLLLWFLGVAVTIGSIWLLFSFD-SGALGRKGQSLDSC-EEGAQVLLRHFNVSK 91

Query: 545 DQLISMASLFMRSEQNQSLACFDELGLQMPSTDGIACALEELSSDMVRFDTWKKWSTKKL 366
           +QL ++ SLF  S+Q  SL C  E G +M   DGIACAL+   S    F    +W  + +
Sbjct: 92  NQLHALGSLFSDSDQVASLDCTKEPGPEMLINDGIACALKVPCSKKQEFQQHIRWVAEDV 151

Query: 365 EGMDQCLVQHDSVPEKLEGTSVKGALVPTVLSQNTLVSLSYD------QICGKEQCKGHH 204
               +C VQ ++   KL+ + +  +   + +SQ+T+ S+S D        C ++ CK   
Sbjct: 152 GPNGKCPVQDENEFRKLDRSLLDES--ASFVSQSTISSISQDFGKRREVDCAEDHCKLFS 209

Query: 203 KPFMKMCCCLLFGIMLIWRVSHCQEGFWINQQWKHVM---XXXXXXXXXXXXXXXXXQSS 33
              +K C  +L G+++   +      FW  Q  K V                      S 
Sbjct: 210 FDLVKECWWVLVGMIVSCILLGYNLKFWRKQNQKLVQLEPVPQQRQQLLQMNQHQLSHSP 269

Query: 32  VKGDGKWRR 6
            +G GKWR+
Sbjct: 270 PRGAGKWRK 278



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
 Frame = -1

Query: 719 KWRSRAYLILWVFLVSCVVGFLLFSPNGNGVSGRKHRGTELLWEEKARILQVRLNVSKDQ 540
           KWR +  +I    L+  +V   LF      +  R+      + +E+AR+LQ + NVS + 
Sbjct: 275 KWRKKLLIIF--VLLGVLVSIWLFWHLHEKIISRREETLANMCDERARMLQDQFNVSMNH 332

Query: 539 LISMASLFMRSEQNQSLACFDE---------LGLQMPSTDGIACALEELSSDMVRFDTWK 387
           + ++A L       ++ +  D+            + P T G+A AL+    +  +F+   
Sbjct: 333 VHALAILVSTFHHGKNPSAIDQKTFGEYTKRTDFERPLTSGVAYALKVPHLERKQFEEQH 392

Query: 386 KWSTKKLEGMDQCLVQHDSVPEKLEGTSVKGALVPTVLSQNTLVSL-SYDQICGKE 222
            W+ KK+   DQ LVQ D +P+KL+   ++    P + SQ T+  + S D + GKE
Sbjct: 393 GWTIKKMGTEDQTLVQ-DCIPDKLDPAPIQDEYAPVIFSQETVSHIVSIDMMSGKE 447


Top