BLASTX nr result

ID: Coptis23_contig00018069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018069
         (1713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273924.1| PREDICTED: TBC1 domain family member 22B [Vi...   573   e-161
ref|XP_002530302.1| conserved hypothetical protein [Ricinus comm...   569   e-160
ref|XP_002310419.1| predicted protein [Populus trichocarpa] gi|2...   553   e-155
ref|XP_003546791.1| PREDICTED: GTPase-activating protein GYP1-li...   551   e-154
ref|NP_001063669.1| Os09g0515800 [Oryza sativa Japonica Group] g...   551   e-154

>ref|XP_002273924.1| PREDICTED: TBC1 domain family member 22B [Vitis vinifera]
            gi|296084248|emb|CBI24636.3| unnamed protein product
            [Vitis vinifera]
          Length = 448

 Score =  573 bits (1478), Expect = e-161
 Identities = 270/296 (91%), Positives = 288/296 (97%)
 Frame = -1

Query: 1152 PPYMRPTIWRLLLGYAPPNSDRREGVLTRKRLEYLDCVGQYYEIPDTERSDDEISMLRQI 973
            PPYMRPTIWRLLLGYAPPNSDRREGVL RKRLEYLDCV QYY+IPDTERSDDEI+MLRQI
Sbjct: 153  PPYMRPTIWRLLLGYAPPNSDRREGVLKRKRLEYLDCVSQYYDIPDTERSDDEINMLRQI 212

Query: 972  AVDCPRTVPDVTFFQQLEVQKSLERILYTWAIRHPASGYVQGINDLVTPFLIVFLSEHLQ 793
            AVDCPRTVPDV+FFQ+ +VQKSLERILYTWAIRHPASGYVQGINDLVTPFL+VFLSE+L+
Sbjct: 213  AVDCPRTVPDVSFFQEEQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEYLE 272

Query: 792  GNMENWSILNLSRQKISDVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRID 613
            G+M+NWSI+NLS +KIS+VEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRID
Sbjct: 273  GSMDNWSIINLSPEKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRID 332

Query: 612  EPVSRHMDEQGLDFLQFAFRWFNCLLIREIPFHLVARLWDTYLAEGDALPDFLVYIFASF 433
            EPVSRHM+EQGL+FLQFAFRWFNCLLIREIPF+LV RLWDTYLAEGDALPDFLVYIFASF
Sbjct: 333  EPVSRHMEEQGLEFLQFAFRWFNCLLIREIPFNLVTRLWDTYLAEGDALPDFLVYIFASF 392

Query: 432  LLTWSDKLQSLDFQDMVMFLQHLPTQNWTHQELEMVLSRAYMWHTMFNSSPSHLAS 265
            LLTWSD LQ LDFQ++VMFLQHLPT NWTHQELEMVLSRAYMWHTMFNSSPSHLAS
Sbjct: 393  LLTWSDTLQKLDFQELVMFLQHLPTHNWTHQELEMVLSRAYMWHTMFNSSPSHLAS 448



 Score = 80.1 bits (196), Expect(2) = 5e-26
 Identities = 39/55 (70%), Positives = 47/55 (85%)
 Frame = -1

Query: 1683 NLDSRFNQTLRNVQGLLQGRSFPGKVLLTRRADTPNDSNLTTHSPDIERSYSEND 1519
            +LDSRFNQTLRNVQ LL+GRSFPGKVLLTRR+D  + S++   SPD ERS+S+ND
Sbjct: 14   SLDSRFNQTLRNVQELLKGRSFPGKVLLTRRSDPLDSSSVQERSPDDERSFSDND 68



 Score = 65.9 bits (159), Expect(2) = 5e-26
 Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
 Frame = -3

Query: 1477 PSELMDRASELETQNTSMKD--VTANKLKQSVSNIESTSCETQKTIIGARATDSARVMKF 1304
            PS+ +D++ E E + T   +   TANKLK S  N E+T  +  K+ +GARATDSARVMKF
Sbjct: 71   PSDRIDKSVEEEDEGTGKPNNTATANKLKSSKPNTENTPKDVPKSTMGARATDSARVMKF 130

Query: 1303 TKELSG 1286
            TKELSG
Sbjct: 131  TKELSG 136


>ref|XP_002530302.1| conserved hypothetical protein [Ricinus communis]
            gi|223530158|gb|EEF32069.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 430

 Score =  569 bits (1466), Expect = e-160
 Identities = 267/296 (90%), Positives = 286/296 (96%)
 Frame = -1

Query: 1152 PPYMRPTIWRLLLGYAPPNSDRREGVLTRKRLEYLDCVGQYYEIPDTERSDDEISMLRQI 973
            PPYMRP +WRLLLGYAPPNSDRREGVL RKRLEYLDCV Q+Y+IPDTERSDDEI+MLRQI
Sbjct: 135  PPYMRPNVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVDQFYDIPDTERSDDEINMLRQI 194

Query: 972  AVDCPRTVPDVTFFQQLEVQKSLERILYTWAIRHPASGYVQGINDLVTPFLIVFLSEHLQ 793
            +VDCPRTVPDVTFFQQ +VQKSLERILYTWAIRHPASGYVQGINDL TPFL+VFLSEHL+
Sbjct: 195  SVDCPRTVPDVTFFQQAQVQKSLERILYTWAIRHPASGYVQGINDLATPFLVVFLSEHLE 254

Query: 792  GNMENWSILNLSRQKISDVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRID 613
            G++ENWSI +LS+ KIS++EADCY CLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRID
Sbjct: 255  GDIENWSISDLSQDKISNIEADCYGCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRID 314

Query: 612  EPVSRHMDEQGLDFLQFAFRWFNCLLIREIPFHLVARLWDTYLAEGDALPDFLVYIFASF 433
            EPVSRHM+EQGL+FLQFAFRWFNCLLIREIPFHLV RLWDTYLAEGDALPDFLVYI+ASF
Sbjct: 315  EPVSRHMEEQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYIYASF 374

Query: 432  LLTWSDKLQSLDFQDMVMFLQHLPTQNWTHQELEMVLSRAYMWHTMFNSSPSHLAS 265
            LLTWSDKLQ LDFQ+MVMFLQHLPTQNWTHQELEMVLSRAYMWH+MFNSSPSHLAS
Sbjct: 375  LLTWSDKLQKLDFQEMVMFLQHLPTQNWTHQELEMVLSRAYMWHSMFNSSPSHLAS 430



 Score = 68.2 bits (165), Expect(2) = 1e-19
 Identities = 36/65 (55%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
 Frame = -3

Query: 1474 SELMDRASELETQNTSMKDVTA--NKLKQSVSNIESTSCETQKTIIGARATDSARVMKFT 1301
            S+ MD + E E ++T   +++A  NKLK S+SNIE+   ++QK+ +GARATDSAR+MKFT
Sbjct: 54   SDRMDMSREAEARSTGKLNISAATNKLKPSMSNIETKPKDSQKSPMGARATDSARIMKFT 113

Query: 1300 KELSG 1286
            KELSG
Sbjct: 114  KELSG 118



 Score = 56.2 bits (134), Expect(2) = 1e-19
 Identities = 26/41 (63%), Positives = 30/41 (73%)
 Frame = -1

Query: 1641 GLLQGRSFPGKVLLTRRADTPNDSNLTTHSPDIERSYSEND 1519
            GLL+GRS PGKVLLTR+ D P D +L   SP   RS+SEND
Sbjct: 10   GLLKGRSIPGKVLLTRKTDPPEDPSLQERSPSFGRSFSEND 50


>ref|XP_002310419.1| predicted protein [Populus trichocarpa] gi|222853322|gb|EEE90869.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  553 bits (1425), Expect = e-155
 Identities = 260/296 (87%), Positives = 281/296 (94%)
 Frame = -1

Query: 1152 PPYMRPTIWRLLLGYAPPNSDRREGVLTRKRLEYLDCVGQYYEIPDTERSDDEISMLRQI 973
            PPYMRP IWRLLLGYA PNSDRREGVL RKRLEYLDCV Q+Y+IPDTERSDDEI+MLRQI
Sbjct: 147  PPYMRPNIWRLLLGYASPNSDRREGVLRRKRLEYLDCVAQFYDIPDTERSDDEINMLRQI 206

Query: 972  AVDCPRTVPDVTFFQQLEVQKSLERILYTWAIRHPASGYVQGINDLVTPFLIVFLSEHLQ 793
            +VDCPRTVPDV FFQQ +VQKSLERILYTWAIRHPASGYVQGINDL TPFL+VFLSEHL+
Sbjct: 207  SVDCPRTVPDVIFFQQEQVQKSLERILYTWAIRHPASGYVQGINDLATPFLVVFLSEHLE 266

Query: 792  GNMENWSILNLSRQKISDVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRID 613
            G++  WSI +LS  KIS+VEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELV RID
Sbjct: 267  GDIHKWSISDLSPDKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVNRID 326

Query: 612  EPVSRHMDEQGLDFLQFAFRWFNCLLIREIPFHLVARLWDTYLAEGDALPDFLVYIFASF 433
            EPVSRHM+EQGL+FLQFAFRWFNCLLIREIPF+LV RLWDTYLAEGDALPDFLVYIFASF
Sbjct: 327  EPVSRHMEEQGLEFLQFAFRWFNCLLIREIPFNLVTRLWDTYLAEGDALPDFLVYIFASF 386

Query: 432  LLTWSDKLQSLDFQDMVMFLQHLPTQNWTHQELEMVLSRAYMWHTMFNSSPSHLAS 265
            LLTWS++LQ LDFQ++VMFLQHLPTQNWTHQELEMVLSRA+MWH+MFN+SPSHLAS
Sbjct: 387  LLTWSEELQKLDFQELVMFLQHLPTQNWTHQELEMVLSRAFMWHSMFNNSPSHLAS 442



 Score = 74.7 bits (182), Expect(2) = 8e-27
 Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
 Frame = -3

Query: 1474 SELMDRASELETQNTSMK---DVTANKLKQSVSNIESTSCETQKTIIGARATDSARVMKF 1304
            S+ MD + E E Q TS +   ++T NKLK + SN+E TS E QK+++GARATDSARVMKF
Sbjct: 65   SDQMDMSKEAEAQGTSKQLNNNMTTNKLKPTNSNVEITSKEVQKSVMGARATDSARVMKF 124

Query: 1303 TKELSG 1286
            TKELSG
Sbjct: 125  TKELSG 130



 Score = 73.9 bits (180), Expect(2) = 8e-27
 Identities = 38/62 (61%), Positives = 45/62 (72%)
 Frame = -1

Query: 1704 REKEGTFNLDSRFNQTLRNVQGLLQGRSFPGKVLLTRRADTPNDSNLTTHSPDIERSYSE 1525
            +  +   +LDSR NQTL+NVQGLL+GRS PGKVLLTRRAD P D +L   S    RS+SE
Sbjct: 2    KNSDNNSSLDSRINQTLKNVQGLLKGRSIPGKVLLTRRADPPEDPSL--RSSTFGRSFSE 59

Query: 1524 ND 1519
            ND
Sbjct: 60   ND 61


>ref|XP_003546791.1| PREDICTED: GTPase-activating protein GYP1-like [Glycine max]
          Length = 455

 Score =  551 bits (1421), Expect = e-154
 Identities = 257/296 (86%), Positives = 282/296 (95%)
 Frame = -1

Query: 1152 PPYMRPTIWRLLLGYAPPNSDRREGVLTRKRLEYLDCVGQYYEIPDTERSDDEISMLRQI 973
            P YMRPT+WRLLLGYAPPNSDRREGVL RKRLEYLDCV QYY+IPDTERSDDEI+MLRQI
Sbjct: 160  PDYMRPTVWRLLLGYAPPNSDRREGVLKRKRLEYLDCVSQYYDIPDTERSDDEINMLRQI 219

Query: 972  AVDCPRTVPDVTFFQQLEVQKSLERILYTWAIRHPASGYVQGINDLVTPFLIVFLSEHLQ 793
            AVDCPRTVP+V+FFQQ +VQKSLERILYTWAIRHPASGYVQGINDLVTPFL+VFLSE+L+
Sbjct: 220  AVDCPRTVPEVSFFQQQQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEYLE 279

Query: 792  GNMENWSILNLSRQKISDVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRID 613
            G ++NWS+ +LS  +IS++EADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRID
Sbjct: 280  GGIDNWSMSDLSSDEISNIEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRID 339

Query: 612  EPVSRHMDEQGLDFLQFAFRWFNCLLIREIPFHLVARLWDTYLAEGDALPDFLVYIFASF 433
            +P S HM+EQGL+FLQFAFRWFNCLLIREIPFHLV RLWDTYLAEGDALPDFLVYI ASF
Sbjct: 340  DPASNHMEEQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYISASF 399

Query: 432  LLTWSDKLQSLDFQDMVMFLQHLPTQNWTHQELEMVLSRAYMWHTMFNSSPSHLAS 265
            LLTWSDKLQ LDFQ+MVMFLQHLPT+NWT QELEMVLSRA+MWH+MFN+SPSHLA+
Sbjct: 400  LLTWSDKLQKLDFQEMVMFLQHLPTKNWTQQELEMVLSRAFMWHSMFNNSPSHLAN 455



 Score = 63.5 bits (153), Expect(2) = 3e-18
 Identities = 30/52 (57%), Positives = 43/52 (82%)
 Frame = -1

Query: 1680 LDSRFNQTLRNVQGLLQGRSFPGKVLLTRRADTPNDSNLTTHSPDIERSYSE 1525
            LDSRFNQTLRNVQGLL+GR+ PGK+LL++R ++P+ ++L++ +     SYSE
Sbjct: 24   LDSRFNQTLRNVQGLLKGRNIPGKILLSQRVESPDYTSLSSPTYIRSSSYSE 75



 Score = 56.2 bits (134), Expect(2) = 3e-18
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = -3

Query: 1408 NKLKQSVSNIESTSCETQKTIIGARATDSARVMKFTKELS 1289
            NKLK S SN+ES+S E +K+ +GARATDSARVMKFTK LS
Sbjct: 103  NKLKISASNVESSSEEVRKSSMGARATDSARVMKFTKVLS 142


>ref|NP_001063669.1| Os09g0515800 [Oryza sativa Japonica Group]
            gi|50725365|dbj|BAD34437.1| putative tbc1 domain family
            protein [Oryza sativa Japonica Group]
            gi|50726241|dbj|BAD33817.1| putative tbc1 domain family
            protein [Oryza sativa Japonica Group]
            gi|113631902|dbj|BAF25583.1| Os09g0515800 [Oryza sativa
            Japonica Group] gi|215694618|dbj|BAG89809.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218202457|gb|EEC84884.1| hypothetical protein
            OsI_32040 [Oryza sativa Indica Group]
            gi|222641918|gb|EEE70050.1| hypothetical protein
            OsJ_30011 [Oryza sativa Japonica Group]
          Length = 444

 Score =  551 bits (1419), Expect = e-154
 Identities = 255/296 (86%), Positives = 278/296 (93%)
 Frame = -1

Query: 1152 PPYMRPTIWRLLLGYAPPNSDRREGVLTRKRLEYLDCVGQYYEIPDTERSDDEISMLRQI 973
            PPYMRP IWRLLLGYAPPN+DRREGVLTRKRLEY++CV QYY+IPDTERSD+EI+MLRQI
Sbjct: 149  PPYMRPNIWRLLLGYAPPNADRREGVLTRKRLEYVECVSQYYDIPDTERSDEEINMLRQI 208

Query: 972  AVDCPRTVPDVTFFQQLEVQKSLERILYTWAIRHPASGYVQGINDLVTPFLIVFLSEHLQ 793
            AVDCPRTVPDVTFFQ  ++QKSLERILYTWAIRHPASGYVQGINDL+TPFL+VFLSEHL+
Sbjct: 209  AVDCPRTVPDVTFFQHPQIQKSLERILYTWAIRHPASGYVQGINDLLTPFLVVFLSEHLE 268

Query: 792  GNMENWSILNLSRQKISDVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRID 613
            GNM+ WS+  LS Q +S++EADCYWCLSK LDGMQDHYTFAQPGIQRLVF+LKELV RID
Sbjct: 269  GNMDTWSMEKLSPQDVSNIEADCYWCLSKFLDGMQDHYTFAQPGIQRLVFRLKELVHRID 328

Query: 612  EPVSRHMDEQGLDFLQFAFRWFNCLLIREIPFHLVARLWDTYLAEGDALPDFLVYIFASF 433
            EPVS+HM+EQGLDFLQFAFRWFNCL+IREIPFHLV RLWDTYLAEGD LPDFLVYI ASF
Sbjct: 329  EPVSKHMEEQGLDFLQFAFRWFNCLMIREIPFHLVTRLWDTYLAEGDYLPDFLVYISASF 388

Query: 432  LLTWSDKLQSLDFQDMVMFLQHLPTQNWTHQELEMVLSRAYMWHTMFNSSPSHLAS 265
            LLTWSDKL+ LDFQ+MVMFLQHLPT+NW H ELEMVLSRAYMWHTMF SSPSHLAS
Sbjct: 389  LLTWSDKLKKLDFQEMVMFLQHLPTRNWAHHELEMVLSRAYMWHTMFKSSPSHLAS 444



 Score = 58.9 bits (141), Expect(2) = 7e-12
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = -1

Query: 1683 NLDSRFNQTLRNVQGLLQGRSFPGKVLLTRRADTPNDSNLTTHSPDIERSYSEND 1519
            N + RFNQTLRNVQG+L+GRSFPGKVLLTRR++  +    +    +    Y +N+
Sbjct: 18   NTEWRFNQTLRNVQGMLKGRSFPGKVLLTRRSEPLSPPEYSPRYENDRDEYEQNE 72



 Score = 39.3 bits (90), Expect(2) = 7e-12
 Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
 Frame = -3

Query: 1414 TANKLKQSVSNIESTSC-----ETQKTIIGARATDSARVMKFTKELS 1289
            TA+ +    SN  STS      + Q  + GARATDSAR+ KFT ELS
Sbjct: 85   TADSMSAKKSNPPSTSSTNSLPDAQGLVSGARATDSARIAKFTNELS 131


Top