BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018064
         (1462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containi...   564   e-158
emb|CBI33534.3| unnamed protein product [Vitis vinifera]              562   e-158
ref|XP_002301697.1| predicted protein [Populus trichocarpa] gi|2...   559   e-157
ref|XP_002532468.1| pentatricopeptide repeat-containing protein,...   541   e-151
ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containi...   528   e-147

>ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Vitis vinifera]
          Length = 502

 Score =  564 bits (1453), Expect = e-158
 Identities = 280/470 (59%), Positives = 355/470 (75%)
 Frame = +2

Query: 53   RTKKRPTSQPDPSPNKKPHEKKRPTFPSYLQTPNLTPKIKLVCEILANTPTPNVETTLED 232
            R K+  +S  D + + +    KRP+FP+YL+TPNL+PK++L+CEI+ANTP+  VE  L D
Sbjct: 23   RNKRHSSSTTDSATHHQT--PKRPSFPTYLETPNLSPKVRLLCEIIANTPSSTVEEVLHD 80

Query: 233  TGIRVTTDDVEQVLKLSYAHPGPAVKFFRWSGKQLNDNHSPYGWNLVVDLLGSNSLFEAM 412
            T IRV+ +DVE  LKLSY  PG AVKFFRWSG QLNDNHSPY WNLVVD+LG N LF+AM
Sbjct: 81   TAIRVSPEDVEDSLKLSYGFPGSAVKFFRWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAM 140

Query: 413  WDAIKSMKKEGLLSLATFASVFSSYVVGECVDEAMMTFEVMDQYGCARDVVALNSLLSAI 592
            WDA+KSMKK+GLLSLATFAS+FSSYV+ + V EA+MTF+VM+QYGC RD+VALNSLLSAI
Sbjct: 141  WDAVKSMKKQGLLSLATFASIFSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLSAI 200

Query: 593  CRQGKTVKAWEFLHIAKEKIRLDGDTYAILLEGWESEGDVGNAHKTFGEMVIQFGWDPVN 772
            CR G+TV+A EFL   +  IR D DTYAILLEGWESEG+ G A +TF EMV+  GWDP N
Sbjct: 201  CRDGRTVQAAEFLRNVRGLIRPDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGN 260

Query: 773  VPAYDAFLNTLLKSHHDGVRETMKFFDVMKSNRCFPGMKFFRSALNEFLKTSNLRDASNV 952
            V AYD+FLN LL    DG RE MKFF++M+  +C PGM+F+R  L E +KTS+ + A  +
Sbjct: 261  VSAYDSFLNALLHG-PDGRREAMKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLL 319

Query: 953  WETMVRLNGCKPDTEMYNGMMSLQCYLNQADVAYRLLDEMVFYGAFPDLETYSTLLKFML 1132
            W+TM+  N C+PDTEMYN M++L C  +   +A  +LDEMV  GAFPD ETY+ L +F++
Sbjct: 320  WQTMLSRNICRPDTEMYNSMIALHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLI 379

Query: 1133 KLRKVREVSVIFNEMVKNEFIPTHENCSAALTLYVDIGDPDMAIKVWKCMLENEMMPGWE 1312
            + RK+ E   IF+EMV+NE +P   NC+AA+ +Y+D+GD   AIKVWK ++EN    G E
Sbjct: 380  RRRKLEEAFSIFSEMVQNECVPDLTNCNAAVRIYLDLGDVYKAIKVWKYIIENH-DSGLE 438

Query: 1313 IAGNKFIVGLRDLNRLPEARKYAEDMIERGIKLHSKTLSKLKQSLTQLGK 1462
              GN  + GLRD +R+PEA KYA+DMI RGIKL S TLSKLK +L ++GK
Sbjct: 439  ETGNLLVTGLRDHDRIPEAVKYAKDMIVRGIKLTSSTLSKLKHALVEVGK 488


>emb|CBI33534.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  562 bits (1449), Expect = e-158
 Identities = 283/490 (57%), Positives = 360/490 (73%), Gaps = 7/490 (1%)
 Frame = +2

Query: 14   SKNIFSFLLSTMDRTKKRPTSQP-----DPSPNKKPHEK--KRPTFPSYLQTPNLTPKIK 172
            ++N+  F  S  +  K    S P       + +   H +  KRP+FP+YL+TPNL+PK++
Sbjct: 5    TENMSPFFFSWAENQKNVYISSPARRHSSSTTDSATHHQTPKRPSFPTYLETPNLSPKVR 64

Query: 173  LVCEILANTPTPNVETTLEDTGIRVTTDDVEQVLKLSYAHPGPAVKFFRWSGKQLNDNHS 352
            L+CEI+ANTP+  VE  L DT IRV+ +DVE  LKLSY  PG AVKFFRWSG QLNDNHS
Sbjct: 65   LLCEIIANTPSSTVEEVLHDTAIRVSPEDVEDSLKLSYGFPGSAVKFFRWSGHQLNDNHS 124

Query: 353  PYGWNLVVDLLGSNSLFEAMWDAIKSMKKEGLLSLATFASVFSSYVVGECVDEAMMTFEV 532
            PY WNLVVD+LG N LF+AMWDA+KSMKK+GLLSLATFAS+FSSYV+ + V EA+MTF+V
Sbjct: 125  PYSWNLVVDMLGKNFLFDAMWDAVKSMKKQGLLSLATFASIFSSYVIADRVREAIMTFDV 184

Query: 533  MDQYGCARDVVALNSLLSAICRQGKTVKAWEFLHIAKEKIRLDGDTYAILLEGWESEGDV 712
            M+QYGC RD+VALNSLLSAICR G+TV+A EFL   +  IR D DTYAILLEGWESEG+ 
Sbjct: 185  MEQYGCPRDIVALNSLLSAICRDGRTVQAAEFLRNVRGLIRPDADTYAILLEGWESEGNC 244

Query: 713  GNAHKTFGEMVIQFGWDPVNVPAYDAFLNTLLKSHHDGVRETMKFFDVMKSNRCFPGMKF 892
            G A +TF EMV+  GWDP NV AYD+FLN LL    DG RE MKFF++M+  +C PGM+F
Sbjct: 245  GAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHG-PDGRREAMKFFEIMRDRQCSPGMRF 303

Query: 893  FRSALNEFLKTSNLRDASNVWETMVRLNGCKPDTEMYNGMMSLQCYLNQADVAYRLLDEM 1072
            +R  L E +KTS+ + A  +W+TM+  N C+PDTEMYN M++L C  +   +A  +LDEM
Sbjct: 304  YRIGLQECVKTSDSKGAQLLWQTMLSRNICRPDTEMYNSMIALHCSCDNIVMARGMLDEM 363

Query: 1073 VFYGAFPDLETYSTLLKFMLKLRKVREVSVIFNEMVKNEFIPTHENCSAALTLYVDIGDP 1252
            V  GAFPD ETY+ L +F+++ RK+ E   IF+EMV+NE +P   NC+AA+ +Y+D+GD 
Sbjct: 364  VCNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEMVQNECVPDLTNCNAAVRIYLDLGDV 423

Query: 1253 DMAIKVWKCMLENEMMPGWEIAGNKFIVGLRDLNRLPEARKYAEDMIERGIKLHSKTLSK 1432
              AIKVWK ++EN    G E  GN  + GLRD +R+PEA KYA+DMI RGIKL S TLSK
Sbjct: 424  YKAIKVWKYIIENH-DSGLEETGNLLVTGLRDHDRIPEAVKYAKDMIVRGIKLTSSTLSK 482

Query: 1433 LKQSLTQLGK 1462
            LK +L ++GK
Sbjct: 483  LKHALVEVGK 492


>ref|XP_002301697.1| predicted protein [Populus trichocarpa] gi|222843423|gb|EEE80970.1|
            predicted protein [Populus trichocarpa]
          Length = 499

 Score =  559 bits (1440), Expect = e-157
 Identities = 275/446 (61%), Positives = 341/446 (76%)
 Frame = +2

Query: 116  KRPTFPSYLQTPNLTPKIKLVCEILANTPTPNVETTLEDTGIRVTTDDVEQVLKLSYAHP 295
            K+P+F SYL+TPNL P IKL+CEI+ANTP+ NVE+ L+ T IRV   DVEQVLKLSY+ P
Sbjct: 35   KKPSFQSYLETPNLPPTIKLLCEIIANTPSHNVESVLDATVIRVKQTDVEQVLKLSYSSP 94

Query: 296  GPAVKFFRWSGKQLNDNHSPYGWNLVVDLLGSNSLFEAMWDAIKSMKKEGLLSLATFASV 475
            G AVKFFRW+G QLND HSPY WNLVVDLLG NS+F+AMW AIKSMK+E L+SLATFASV
Sbjct: 95   GSAVKFFRWAGLQLNDKHSPYSWNLVVDLLGKNSMFDAMWGAIKSMKRENLVSLATFASV 154

Query: 476  FSSYVVGECVDEAMMTFEVMDQYGCARDVVALNSLLSAICRQGKTVKAWEFLHIAKEKIR 655
            FSSYV+ + V EA+MTFEVMDQYGC R+VVALNSLLSAICR+G+T  A EFLH+AK +I 
Sbjct: 155  FSSYVIVDRVKEAIMTFEVMDQYGCTRNVVALNSLLSAICREGRTFDAVEFLHVAKNRIL 214

Query: 656  LDGDTYAILLEGWESEGDVGNAHKTFGEMVIQFGWDPVNVPAYDAFLNTLLKSHHDGVRE 835
             D D+YAILLEGWE E +V +A  TF +MV   GWDP NVPAYD FL+TLL   +DG+RE
Sbjct: 215  PDADSYAILLEGWEKEMNVASARTTFADMVSMVGWDPRNVPAYDTFLSTLLMG-YDGLRE 273

Query: 836  TMKFFDVMKSNRCFPGMKFFRSALNEFLKTSNLRDASNVWETMVRLNGCKPDTEMYNGMM 1015
             MK FD MK   CFPG+KFFR AL E LK +++R A  +WET+V   G +PD ++YN M+
Sbjct: 274  AMKHFDTMKDRGCFPGVKFFRLALEECLKCNDVRAAMLIWETLVARVGFRPDIQLYNLMI 333

Query: 1016 SLQCYLNQADVAYRLLDEMVFYGAFPDLETYSTLLKFMLKLRKVREVSVIFNEMVKNEFI 1195
             + CY NQ D+A + LDEM++ G FPD +TY+ L ++++K +K++E S + NEM+KNEF 
Sbjct: 334  GIHCYDNQTDIANKFLDEMIYNGVFPDSQTYNVLFQYLIKYKKLKEASFVLNEMIKNEFF 393

Query: 1196 PTHENCSAALTLYVDIGDPDMAIKVWKCMLENEMMPGWEIAGNKFIVGLRDLNRLPEARK 1375
            P   NC+AA+  Y+D  +P MAIKVWKCM+EN      E AGN  +V LR  + +PEA K
Sbjct: 394  PNKTNCNAAIKAYMDSKEPYMAIKVWKCMMENYGESDLEEAGNMLVVELRYHHMVPEAVK 453

Query: 1376 YAEDMIERGIKLHSKTLSKLKQSLTQ 1453
            YAE MIE+GIKL S +LSKLKQ L +
Sbjct: 454  YAEVMIEKGIKLTSSSLSKLKQMLNE 479


>ref|XP_002532468.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527826|gb|EEF29924.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 510

 Score =  541 bits (1394), Expect = e-151
 Identities = 270/452 (59%), Positives = 335/452 (74%)
 Frame = +2

Query: 107  HEKKRPTFPSYLQTPNLTPKIKLVCEILANTPTPNVETTLEDTGIRVTTDDVEQVLKLSY 286
            +  K PTFPSYL+TPNL+PKIKL+CEI+A  P+  VET L++TG+ V+  DVEQV+KLSY
Sbjct: 47   YPNKHPTFPSYLETPNLSPKIKLLCEIIAKIPSSTVETILDETGLYVSQYDVEQVIKLSY 106

Query: 287  AHPGPAVKFFRWSGKQLNDNHSPYGWNLVVDLLGSNSLFEAMWDAIKSMKKEGLLSLATF 466
            + PGPAVKFFRW+G +L DNHSPY WNLVVDLLG N LF+AMWDAIKSMK + L+SLATF
Sbjct: 107  SFPGPAVKFFRWAGFRLQDNHSPYSWNLVVDLLGKNCLFDAMWDAIKSMKSKELVSLATF 166

Query: 467  ASVFSSYVVGECVDEAMMTFEVMDQYGCARDVVALNSLLSAICRQGKTVKAWEFLHIAKE 646
            ASVF SYV    V +A+ TFEVM+QYG  RDVVALNSLLSAICR GKTV A +FL +AK 
Sbjct: 167  ASVFGSYVTAGRVKDAIFTFEVMNQYGVVRDVVALNSLLSAICRDGKTVDAVDFLFVAKN 226

Query: 647  KIRLDGDTYAILLEGWESEGDVGNAHKTFGEMVIQFGWDPVNVPAYDAFLNTLLKSHHDG 826
             I+ D DT+AILLEGWE E ++ N+ +TF EMV + GWDP N PAYD FL TLL     G
Sbjct: 227  SIKPDADTFAILLEGWEKELNLVNSRQTFDEMVREIGWDPANTPAYDTFLCTLLMG-RIG 285

Query: 827  VRETMKFFDVMKSNRCFPGMKFFRSALNEFLKTSNLRDASNVWETMVRLNGCKPDTEMYN 1006
              E ++F ++MK  RC PGM+FFR+A+ E LK +++R A  +WE M+  NG +PD EMYN
Sbjct: 286  FNEVIEFLEIMKEKRCCPGMRFFRAAIEECLKVNDVRVAGLIWEVMMETNGFRPDIEMYN 345

Query: 1007 GMMSLQCYLNQADVAYRLLDEMVFYGAFPDLETYSTLLKFMLKLRKVREVSVIFNEMVKN 1186
             M+SL CY N  D+A R LDEMV+ G FPD +TY+ L +F++K RK++E SV+FNEM+KN
Sbjct: 346  LMISLYCYTNNTDIALRFLDEMVYNGVFPDRQTYNLLFQFLIKSRKLKEASVLFNEMIKN 405

Query: 1187 EFIPTHENCSAALTLYVDIGDPDMAIKVWKCMLENEMMPGWEIAGNKFIVGLRDLNRLPE 1366
            E +P   NCSAA+ +++   DP MAIKVWKCM+EN  +   E  GN  IV L DL+  PE
Sbjct: 406  ECLPNQANCSAAVRVFMHSKDPYMAIKVWKCMIENYEL-DLEETGNLLIVELCDLHMDPE 464

Query: 1367 ARKYAEDMIERGIKLHSKTLSKLKQSLTQLGK 1462
            A KYAE MI +GIK+ S T+ KLK  L Q  K
Sbjct: 465  AVKYAESMIGKGIKVTSPTMEKLKLCLKQARK 496


>ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Glycine max]
          Length = 485

 Score =  528 bits (1360), Expect = e-147
 Identities = 269/466 (57%), Positives = 335/466 (71%), Gaps = 1/466 (0%)
 Frame = +2

Query: 53   RTKKRPTSQPDPSP-NKKPHEKKRPTFPSYLQTPNLTPKIKLVCEILANTPTPNVETTLE 229
            R K+   S   PSP +KKP      TFPS+   PNL   IK +C ++A T   +VE +L+
Sbjct: 8    RRKRAHPSSSSPSPISKKPQ-----TFPSFQDIPNLPSNIKSLCHLIATTSAASVEHSLQ 62

Query: 230  DTGIRVTTDDVEQVLKLSYAHPGPAVKFFRWSGKQLNDNHSPYGWNLVVDLLGSNSLFEA 409
               I VT  DVE+VLKLSY  PG AVKFFRWSG+ LNDNH+PY WNLVVD+LG N  F+A
Sbjct: 63   SAAISVTPHDVEEVLKLSYGFPGQAVKFFRWSGRHLNDNHTPYSWNLVVDILGKNRFFDA 122

Query: 410  MWDAIKSMKKEGLLSLATFASVFSSYVVGECVDEAMMTFEVMDQYGCARDVVALNSLLSA 589
            MWDAIKSM KEGLLSLATFASVFSSYV  + + EA+M FE+MD Y   RDVVALNSLLSA
Sbjct: 123  MWDAIKSMNKEGLLSLATFASVFSSYVAADRIREAIMAFEIMDNYCVVRDVVALNSLLSA 182

Query: 590  ICRQGKTVKAWEFLHIAKEKIRLDGDTYAILLEGWESEGDVGNAHKTFGEMVIQFGWDPV 769
            IC  G+T+ A ++L +AK+ +R D DTYAIL+EGWE E  V  A +TF EMVI+ GWDP+
Sbjct: 183  ICSNGRTLDACDYLQVAKKLVRPDTDTYAILMEGWEGENGVVGAKETFAEMVIEIGWDPL 242

Query: 770  NVPAYDAFLNTLLKSHHDGVRETMKFFDVMKSNRCFPGMKFFRSALNEFLKTSNLRDASN 949
            NVPAYD+FL TL++   DG+ E +KF D M+  RCFPG++F ++AL+E +K+ ++R A  
Sbjct: 243  NVPAYDSFLCTLVRG-PDGLLEAIKFVDSMRDRRCFPGVRFLKAALDECVKSHDVRTAEF 301

Query: 950  VWETMVRLNGCKPDTEMYNGMMSLQCYLNQADVAYRLLDEMVFYGAFPDLETYSTLLKFM 1129
             WE +V     +P  EMYN M+ L CY    D A R+LDEMV+ GAFPD+ETY+ L KF+
Sbjct: 302  FWEVLVVGKVVQPTAEMYNLMIGLCCYRGDTDAARRMLDEMVYQGAFPDVETYNLLFKFL 361

Query: 1130 LKLRKVREVSVIFNEMVKNEFIPTHENCSAALTLYVDIGDPDMAIKVWKCMLENEMMPGW 1309
            +K RK+RE SV+F EMVKNE +P  +NC AA+  YVD G+P MAIKVWK ++EN      
Sbjct: 362  IKGRKLREASVVFAEMVKNECVPEQDNCDAAVKAYVDCGEPVMAIKVWKYLVEN-YKKDL 420

Query: 1310 EIAGNKFIVGLRDLNRLPEARKYAEDMIERGIKLHSKTLSKLKQSL 1447
            E   N  +VGLRDLNRLPEA KYAEDMI+R I+L S T+SKL+QSL
Sbjct: 421  ERTANFLVVGLRDLNRLPEAVKYAEDMIDREIRLSSNTMSKLRQSL 466