BLASTX nr result

ID: Coptis23_contig00018055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018055
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39695.3| unnamed protein product [Vitis vinifera]              122   3e-26
emb|CAN77579.1| hypothetical protein VITISV_015345 [Vitis vinifera]   122   3e-26
ref|XP_002315099.1| predicted protein [Populus trichocarpa] gi|2...   101   1e-19
ref|XP_004145969.1| PREDICTED: uncharacterized protein LOC101212...    91   2e-16
ref|XP_003576741.1| PREDICTED: uncharacterized protein LOC100828...    78   9e-13

>emb|CBI39695.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  122 bits (307), Expect = 3e-26
 Identities = 80/192 (41%), Positives = 107/192 (55%), Gaps = 16/192 (8%)
 Frame = -1

Query: 555 DKNDYDWLKTPPATPLFASLEMDAGAPDLVVQRELPILTHLSRFSGNSQEAPKMIPRSKS 376
           +KNDYDWLKTPPATPLF SLEM+A APDLVV RE+PIL  LSRFS NS+   +   RS S
Sbjct: 77  NKNDYDWLKTPPATPLFPSLEMEANAPDLVVHREIPILQPLSRFSSNSEAPKEGNGRSLS 136

Query: 375 PNPMAKVLPRSFAQNIRPNVPPSWTDATSKKGPWVSK----IITNERSNXXXXXXXXXXX 208
           P+P  K+ PRS   + R ++  S  +  + KGP +      I  ++RSN           
Sbjct: 137 PSPTPKIPPRSTTPSGRSSI--SLAETKNPKGPLILNQKVGIDPSKRSNLGTITSKPTTQ 194

Query: 207 XXXXPFNTQKSTKRDLSSD---------LSPLKLTVVSSE---SLNETPPNLITNRSSST 64
                     +  R++ +D         +SPL  T + ++     +ETPPNL T+RSSS 
Sbjct: 195 QESDANFITTNLLRNMGTDSKMKPTSRGVSPLVRTKIPAQIPGFSDETPPNLKTDRSSSA 254

Query: 63  SRGGPSNPSIAS 28
           SRG   NP ++S
Sbjct: 255 SRGRSCNPVLSS 266


>emb|CAN77579.1| hypothetical protein VITISV_015345 [Vitis vinifera]
          Length = 1494

 Score =  122 bits (307), Expect = 3e-26
 Identities = 80/192 (41%), Positives = 107/192 (55%), Gaps = 16/192 (8%)
 Frame = -1

Query: 555 DKNDYDWLKTPPATPLFASLEMDAGAPDLVVQRELPILTHLSRFSGNSQEAPKMIPRSKS 376
           +KNDYDWLKTPPATPLF SLEM+A APDLVV RE+PIL  LSRFS NS+   +   RS S
Sbjct: 77  NKNDYDWLKTPPATPLFPSLEMEANAPDLVVHREIPILQPLSRFSSNSEAPKEGNGRSLS 136

Query: 375 PNPMAKVLPRSFAQNIRPNVPPSWTDATSKKGPWVSK----IITNERSNXXXXXXXXXXX 208
           P+P  K+ PRS   + R ++  S  +  + KGP +      I  ++RSN           
Sbjct: 137 PSPTPKIPPRSTTPSGRSSI--SLAETKNPKGPLILNQKVGIDPSKRSNLGTITSKPTTQ 194

Query: 207 XXXXPFNTQKSTKRDLSSD---------LSPLKLTVVSSE---SLNETPPNLITNRSSST 64
                     +  R++ +D         +SPL  T + ++     +ETPPNL T+RSSS 
Sbjct: 195 QESDANFITTNLLRNMGTDSKMKPTSRGVSPLVRTKIPAQIPGFSDETPPNLKTDRSSSA 254

Query: 63  SRGGPSNPSIAS 28
           SRG   NP ++S
Sbjct: 255 SRGRSCNPVLSS 266


>ref|XP_002315099.1| predicted protein [Populus trichocarpa] gi|222864139|gb|EEF01270.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  101 bits (251), Expect = 1e-19
 Identities = 69/204 (33%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
 Frame = -1

Query: 561 ESDKNDYDWLKTPPATPLFASLEMDAGAPDLVVQRELPILTHLSRFSGNSQEAPKMIPRS 382
           E+DKN+YDWLKTPPATPLF SLEM+A AP  +VQRE+PI+  LSRF+ N+          
Sbjct: 76  ENDKNEYDWLKTPPATPLFPSLEMEANAPGNIVQREIPIIQPLSRFADNTDALKGSTVTL 135

Query: 381 KSPNPMAKVLPRSFAQNIRPNVPPSWTDATSKKGPWVSKIITNERS---NXXXXXXXXXX 211
           ++PN     +P+   +++ P      + +T  K   V+  I N++               
Sbjct: 136 RTPNSKPNRIPQ---RSVTPGQKQRISTSTENKNSKVAAQILNQKMAQFTTDPNRKTNVI 192

Query: 210 XXXXXPFNTQKSTKRDLSSDLS-------------PLKLTVVSSES---LNETPPNLITN 79
                P N + S    LSS+LS             P   + ++++     N+TPPNL T+
Sbjct: 193 ANSAKPTNQKSSQTNFLSSNLSKDIKTKPENRGVSPSVRSTIAAQIPGFSNDTPPNLRTD 252

Query: 78  RSSSTSRGGPSNPSIASSARQPTD 7
           R++S +RG P   +  +S RQ  D
Sbjct: 253 RATSATRGRPVAANPTASVRQKQD 276


>ref|XP_004145969.1| PREDICTED: uncharacterized protein LOC101212726 [Cucumis sativus]
          Length = 373

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 73/202 (36%), Positives = 97/202 (48%), Gaps = 31/202 (15%)
 Frame = -1

Query: 567 LNESDKNDYDWLKTPPATPLFASLEMDAGAPD-LVVQRELPILTHL----SRFSGNSQEA 403
           L E +KNDYDWLKTPPATPLF SLEM+A AP     Q+E P++  L    S+ S NS+  
Sbjct: 77  LFEGNKNDYDWLKTPPATPLFPSLEMEATAPSHKNAQKETPLVQPLSQPQSQASSNSEST 136

Query: 402 PKMIPRSKSPNPMAKVLPRSFAQNIRP----NVPPSWTDATSKKGP-------WVSKI-I 259
            K     KSP   AK+  RS   + RP    ++ P  T  T+   P         S+I +
Sbjct: 137 KKSSGIEKSPITKAKIPSRSITPSNRPRINSSIDPKNTKRTTNPSPNPNHRIDQTSQIDL 196

Query: 258 TNERSNXXXXXXXXXXXXXXXPFNTQKSTKRDL-----------SSDLSPLKLTVVSS-- 118
           T +R+N                 N  K +   +           S   SP+  + ++S  
Sbjct: 197 TVKRNNNIKPTNLKESYTDYLTSNLLKGSTNSVKPNQNQNPNPRSRPTSPIVRSTIASQI 256

Query: 117 -ESLNETPPNLITNRSSSTSRG 55
            E  NETPPNL T+RSSS +RG
Sbjct: 257 PEFSNETPPNLRTDRSSSVTRG 278


>ref|XP_003576741.1| PREDICTED: uncharacterized protein LOC100828226 [Brachypodium
           distachyon]
          Length = 336

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
 Frame = -1

Query: 567 LNESDKNDYDWLKTPPATPLFASLEMDAGAPDLVVQRELPIL--THLSRFSGNSQEAPKM 394
           L + +KNDYDWLKTPPATPLF SLEM+A +P +V QRELP+L     SRFS   + A   
Sbjct: 74  LTDGEKNDYDWLKTPPATPLFRSLEMEADSPQMVFQRELPLLQPVKTSRFSKKPETASIT 133

Query: 393 IPRSKSPNPMAKVLPRSFAQNIRPNVPPSWTDATSKK 283
             RS+SP         S +++  P   PS   ++SKK
Sbjct: 134 STRSESPT------TSSSSKSATPTARPS---SSSKK 161


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