BLASTX nr result
ID: Coptis23_contig00018054
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00018054
(1719 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269554.1| PREDICTED: prolycopene isomerase, chloroplas... 926 0.0
ref|XP_002323362.1| predicted protein [Populus trichocarpa] gi|2... 921 0.0
ref|XP_004136535.1| PREDICTED: prolycopene isomerase, chloroplas... 915 0.0
ref|XP_004161282.1| PREDICTED: LOW QUALITY PROTEIN: prolycopene ... 912 0.0
dbj|BAE79546.1| carotenoid isomerase [Chrysanthemum x morifolium] 912 0.0
>ref|XP_002269554.1| PREDICTED: prolycopene isomerase, chloroplastic-like isoform 1 [Vitis
vinifera]
Length = 641
Score = 926 bits (2393), Expect = 0.0
Identities = 452/523 (86%), Positives = 484/523 (92%)
Frame = -1
Query: 1716 GEKSYYDAIVIGSGIGGLVAGTQLAVKGAKVLVLEKYIIPGGSSGFYERDGYTFDVGSSV 1537
GE+ YDAIVIGSGIGGLVA TQLAVKGA+VLVLEKY+IPGGSSGFY+RDGYTFDVGSSV
Sbjct: 119 GEEKQYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGFYQRDGYTFDVGSSV 178
Query: 1536 MFGFSDKGNLNLITQALAAVGCEMQVIPDPTTVHFHLPNNLSVRVHREYSDFIEELISKF 1357
MFGFSDKGNLNLITQAL AVGC+MQVIPDPTTVHFHLP+NLSVRVHR+Y +FI EL F
Sbjct: 179 MFGFSDKGNLNLITQALEAVGCKMQVIPDPTTVHFHLPSNLSVRVHRQYGEFIAELTKNF 238
Query: 1356 PHEKEGINKFYSECWKIFNALNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGNI 1177
PHEKEGI KFY+ECWKIFNALNSLELKSLEEP+YLFGQFFQKPLECLTLAYYLPQNAG+I
Sbjct: 239 PHEKEGILKFYNECWKIFNALNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDI 298
Query: 1176 ARKFIKDPEVLSFIDAECFIVSTVNALQTPMINASMVLCDRHFXXXXXXXXXXXXIAKSL 997
ARK+IKDP++LSFIDAECFIVSTVNALQTPMINASMVLCDRHF IAKSL
Sbjct: 299 ARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSL 358
Query: 996 AKGLIDQGSNILYRANVTNIILEHGKAVGVKLSDGREFFSKTIISNATRWDTFGKLLKKQ 817
AKGL++ GS ILY+ANVT+IIL GKAVGVKLSDGREFF+KTI+SNATRWDTFGKLLK +
Sbjct: 359 AKGLVENGSEILYKANVTSIILAQGKAVGVKLSDGREFFAKTIVSNATRWDTFGKLLKGE 418
Query: 816 DLPKEEENFQRVYVKAPSFLSIHMGVKADVLPPDTDCHHFVLENGWDSLEEPYGSIFLSI 637
+LPKEE NFQ+VYVKAPSFLSIHMGVKA+VLPPDTDCHHFVLEN W LEEPYGSIFLSI
Sbjct: 419 ELPKEEVNFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLENDWSRLEEPYGSIFLSI 478
Query: 636 PTILDSSLAPEGRHILHIFTTSCMEDWKGLPQKEYEAKKELVADVIISRLEKKLFPGLKA 457
PT+LD+SLAPEGRHILHIFTTS +EDWKGLP K+YEAKKELVAD IISRLEKKLFPGLK+
Sbjct: 479 PTMLDASLAPEGRHILHIFTTSPIEDWKGLPLKDYEAKKELVADEIISRLEKKLFPGLKS 538
Query: 456 SIVFKEIGTPKTHRRYLARDNGTYGPMPRTIPKGLLGMPFNTTAVDGLYCVGDSCFPGQG 277
SIVFKE+GTPKTHRRYLARDNGTYGPMPR PKGLLGMPFNTTA+ GLYCVGDSCFPGQG
Sbjct: 539 SIVFKEVGTPKTHRRYLARDNGTYGPMPRRTPKGLLGMPFNTTAIHGLYCVGDSCFPGQG 598
Query: 276 VIAVAFSGVMCAHRVAADIGLEKKSPILDAVLLRLLGWFRTLA 148
VIAVAFSGVMCAHRVAADIGLEKKSP+LDA LLRLLGW RTLA
Sbjct: 599 VIAVAFSGVMCAHRVAADIGLEKKSPVLDAALLRLLGWLRTLA 641
>ref|XP_002323362.1| predicted protein [Populus trichocarpa] gi|222867992|gb|EEF05123.1|
predicted protein [Populus trichocarpa]
Length = 613
Score = 921 bits (2381), Expect = 0.0
Identities = 449/522 (86%), Positives = 483/522 (92%)
Frame = -1
Query: 1713 EKSYYDAIVIGSGIGGLVAGTQLAVKGAKVLVLEKYIIPGGSSGFYERDGYTFDVGSSVM 1534
E+S YDAIVIGSGIGGLVA TQLAVKGAKVLVLEKY+IPGGSSG+YERDG+TFDVGSSVM
Sbjct: 92 ERSNYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGYYERDGFTFDVGSSVM 151
Query: 1533 FGFSDKGNLNLITQALAAVGCEMQVIPDPTTVHFHLPNNLSVRVHREYSDFIEELISKFP 1354
FGFSDKGNLNLITQALAAVGCEM+VIPDPTTVHFHLPN+LSV+VHREY DFI EL +KFP
Sbjct: 152 FGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVQVHREYIDFISELAAKFP 211
Query: 1353 HEKEGINKFYSECWKIFNALNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGNIA 1174
HEK+GI KFY ECWKIFNALNSLELKSLEEP+YLFGQFFQKPLECLTLAYYLPQNAG+IA
Sbjct: 212 HEKDGILKFYGECWKIFNALNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDIA 271
Query: 1173 RKFIKDPEVLSFIDAECFIVSTVNALQTPMINASMVLCDRHFXXXXXXXXXXXXIAKSLA 994
RK+IKDP++LSFIDAECFIVSTVNALQTPMINA+MVLCDRHF IAKSL+
Sbjct: 272 RKYIKDPQLLSFIDAECFIVSTVNALQTPMINAAMVLCDRHFGGINYPVGGVGGIAKSLS 331
Query: 993 KGLIDQGSNILYRANVTNIILEHGKAVGVKLSDGREFFSKTIISNATRWDTFGKLLKKQD 814
KGL+DQGS ILYRANVTNIILEHGKAVGV+LSDGREFF KTIISNATRWDTFGKLLK +
Sbjct: 332 KGLVDQGSEILYRANVTNIILEHGKAVGVRLSDGREFFGKTIISNATRWDTFGKLLKGET 391
Query: 813 LPKEEENFQRVYVKAPSFLSIHMGVKADVLPPDTDCHHFVLENGWDSLEEPYGSIFLSIP 634
LPKEEENFQ+VYVKAPSFLSIHMGVKA+VLPPDTDCHHFVLE+ W LEEPYGSIFLSIP
Sbjct: 392 LPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWARLEEPYGSIFLSIP 451
Query: 633 TILDSSLAPEGRHILHIFTTSCMEDWKGLPQKEYEAKKELVADVIISRLEKKLFPGLKAS 454
TILDSSLAPEG HILHIFTTS +EDW+GL K+YEAKK++ AD IISRLEKKLFPG+++S
Sbjct: 452 TILDSSLAPEGHHILHIFTTSSIEDWEGLSTKDYEAKKKVAADEIISRLEKKLFPGIRSS 511
Query: 453 IVFKEIGTPKTHRRYLARDNGTYGPMPRTIPKGLLGMPFNTTAVDGLYCVGDSCFPGQGV 274
I F E+G+PKTHRRYLARD GTYGPMPR PKGLLGMPFNTTAVDGLYCVGDSCFPGQGV
Sbjct: 512 IAFMEVGSPKTHRRYLARDKGTYGPMPRRTPKGLLGMPFNTTAVDGLYCVGDSCFPGQGV 571
Query: 273 IAVAFSGVMCAHRVAADIGLEKKSPILDAVLLRLLGWFRTLA 148
IAVAFSGVMCAHRVAADIG+EKKSP+LDA LLRLLGW RTLA
Sbjct: 572 IAVAFSGVMCAHRVAADIGIEKKSPVLDAALLRLLGWLRTLA 613
>ref|XP_004136535.1| PREDICTED: prolycopene isomerase, chloroplastic-like [Cucumis
sativus]
Length = 666
Score = 915 bits (2366), Expect = 0.0
Identities = 443/522 (84%), Positives = 484/522 (92%)
Frame = -1
Query: 1713 EKSYYDAIVIGSGIGGLVAGTQLAVKGAKVLVLEKYIIPGGSSGFYERDGYTFDVGSSVM 1534
EKS YDAIVIGSGIGGLVA TQLAVKGAKVLVLEKY+IPGGSSG+Y++DGYTFDVGSSVM
Sbjct: 145 EKSLYDAIVIGSGIGGLVASTQLAVKGAKVLVLEKYVIPGGSSGYYQKDGYTFDVGSSVM 204
Query: 1533 FGFSDKGNLNLITQALAAVGCEMQVIPDPTTVHFHLPNNLSVRVHREYSDFIEELISKFP 1354
FGFSDKGNLNLITQAL+AVGCEMQVIPDPTTVHFHLP NLSVR+HREY++FIEEL+S FP
Sbjct: 205 FGFSDKGNLNLITQALSAVGCEMQVIPDPTTVHFHLPTNLSVRIHREYNEFIEELVSNFP 264
Query: 1353 HEKEGINKFYSECWKIFNALNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGNIA 1174
HEKEGI KFY +CWKIFNALNSLELKSLEEP+YLFGQFFQKPLECLTLAYYLPQNAG++A
Sbjct: 265 HEKEGILKFYGDCWKIFNALNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDLA 324
Query: 1173 RKFIKDPEVLSFIDAECFIVSTVNALQTPMINASMVLCDRHFXXXXXXXXXXXXIAKSLA 994
RK+IKDP +LSFIDAECFIVSTVNALQTPMINA+MVLCDRHF IAKSLA
Sbjct: 325 RKYIKDPRLLSFIDAECFIVSTVNALQTPMINAAMVLCDRHFGGINYPIGGVGGIAKSLA 384
Query: 993 KGLIDQGSNILYRANVTNIILEHGKAVGVKLSDGREFFSKTIISNATRWDTFGKLLKKQD 814
KGL+D GS+I+Y+ANVT II E+GKAVGVKLSDGREFF+KTI+SNATRWDTFGKLLK D
Sbjct: 385 KGLVDHGSSIMYKANVTKIITENGKAVGVKLSDGREFFAKTIVSNATRWDTFGKLLKGVD 444
Query: 813 LPKEEENFQRVYVKAPSFLSIHMGVKADVLPPDTDCHHFVLENGWDSLEEPYGSIFLSIP 634
LPKEEENFQ++YVKAPSFLSIHMGVKA+VLPPDTDCHHFVLE+ W LEEPYGSIFLSIP
Sbjct: 445 LPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLESDWRRLEEPYGSIFLSIP 504
Query: 633 TILDSSLAPEGRHILHIFTTSCMEDWKGLPQKEYEAKKELVADVIISRLEKKLFPGLKAS 454
T+LD SLAP+GRHILHIFTTS MEDW+GL ++EYEAKK L+AD II+RLEKKLFPGLK+S
Sbjct: 505 TVLDPSLAPDGRHILHIFTTSSMEDWEGLSREEYEAKKALIADEIITRLEKKLFPGLKSS 564
Query: 453 IVFKEIGTPKTHRRYLARDNGTYGPMPRTIPKGLLGMPFNTTAVDGLYCVGDSCFPGQGV 274
I F E+GTP+THRR+LAR+NGTYGPMPR PKGLLGMPFNTT++DGLYCVGDSCFPGQGV
Sbjct: 565 IDFMEVGTPRTHRRFLARNNGTYGPMPRGTPKGLLGMPFNTTSIDGLYCVGDSCFPGQGV 624
Query: 273 IAVAFSGVMCAHRVAADIGLEKKSPILDAVLLRLLGWFRTLA 148
IAVAFSGVMCAHRVAADIGLEKKSPILDA LLRLLGW RTLA
Sbjct: 625 IAVAFSGVMCAHRVAADIGLEKKSPILDAALLRLLGWLRTLA 666
>ref|XP_004161282.1| PREDICTED: LOW QUALITY PROTEIN: prolycopene isomerase,
chloroplastic-like [Cucumis sativus]
Length = 666
Score = 912 bits (2358), Expect = 0.0
Identities = 442/522 (84%), Positives = 483/522 (92%)
Frame = -1
Query: 1713 EKSYYDAIVIGSGIGGLVAGTQLAVKGAKVLVLEKYIIPGGSSGFYERDGYTFDVGSSVM 1534
EKS YDAIVIGSGIGGLVA TQLAVKGAKVLVLEKY+IPGGSSG+Y++DGYTFDVGSSVM
Sbjct: 145 EKSLYDAIVIGSGIGGLVASTQLAVKGAKVLVLEKYVIPGGSSGYYQKDGYTFDVGSSVM 204
Query: 1533 FGFSDKGNLNLITQALAAVGCEMQVIPDPTTVHFHLPNNLSVRVHREYSDFIEELISKFP 1354
FGFSDKGNLNLITQAL+AVGCEMQVIPDPTTVHFHLP NLSVR+HREY++FIEEL+S FP
Sbjct: 205 FGFSDKGNLNLITQALSAVGCEMQVIPDPTTVHFHLPTNLSVRIHREYNEFIEELVSNFP 264
Query: 1353 HEKEGINKFYSECWKIFNALNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGNIA 1174
HEKEGI KFY +CWKIFNALNSLELKSLEEP+YLFGQFFQKPLECLTLAYYLPQNAG++A
Sbjct: 265 HEKEGILKFYGDCWKIFNALNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDLA 324
Query: 1173 RKFIKDPEVLSFIDAECFIVSTVNALQTPMINASMVLCDRHFXXXXXXXXXXXXIAKSLA 994
RK+IKDP +LSFIDAECFIVSTVNALQTPMINA+MVLCDRHF IAKSLA
Sbjct: 325 RKYIKDPRLLSFIDAECFIVSTVNALQTPMINAAMVLCDRHFGGINYPIGGVGGIAKSLA 384
Query: 993 KGLIDQGSNILYRANVTNIILEHGKAVGVKLSDGREFFSKTIISNATRWDTFGKLLKKQD 814
KGL+D GS+I+Y+ANVT II E+GKAVGVKLSDGREFF+KTI+SNATRWDTFGKLLK D
Sbjct: 385 KGLVDHGSSIMYKANVTKIITENGKAVGVKLSDGREFFAKTIVSNATRWDTFGKLLKGVD 444
Query: 813 LPKEEENFQRVYVKAPSFLSIHMGVKADVLPPDTDCHHFVLENGWDSLEEPYGSIFLSIP 634
LPKEEENFQ++YVKAPSFLSIHMGVKA+VLPPDTDCHHFVLE+ W LEEPYGSIFLSIP
Sbjct: 445 LPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLESDWRRLEEPYGSIFLSIP 504
Query: 633 TILDSSLAPEGRHILHIFTTSCMEDWKGLPQKEYEAKKELVADVIISRLEKKLFPGLKAS 454
T+LD SLAP+GRHILHIF TS MEDW+GL ++EYEAKK L+AD II+RLEKKLFPGLK+S
Sbjct: 505 TVLDPSLAPDGRHILHIFXTSSMEDWEGLSREEYEAKKALLADEIITRLEKKLFPGLKSS 564
Query: 453 IVFKEIGTPKTHRRYLARDNGTYGPMPRTIPKGLLGMPFNTTAVDGLYCVGDSCFPGQGV 274
I F E+GTP+THRR+LAR+NGTYGPMPR PKGLLGMPFNTT++DGLYCVGDSCFPGQGV
Sbjct: 565 IDFMEVGTPRTHRRFLARNNGTYGPMPRGTPKGLLGMPFNTTSIDGLYCVGDSCFPGQGV 624
Query: 273 IAVAFSGVMCAHRVAADIGLEKKSPILDAVLLRLLGWFRTLA 148
IAVAFSGVMCAHRVAADIGLEKKSPILDA LLRLLGW RTLA
Sbjct: 625 IAVAFSGVMCAHRVAADIGLEKKSPILDAALLRLLGWLRTLA 666
>dbj|BAE79546.1| carotenoid isomerase [Chrysanthemum x morifolium]
Length = 641
Score = 912 bits (2356), Expect = 0.0
Identities = 446/518 (86%), Positives = 480/518 (92%)
Frame = -1
Query: 1701 YDAIVIGSGIGGLVAGTQLAVKGAKVLVLEKYIIPGGSSGFYERDGYTFDVGSSVMFGFS 1522
YDAIVIGSGIGGLVA TQLAVKGAKVLVLEKY+IPGGSSGFYERDGYTFDVGSSVMFGFS
Sbjct: 124 YDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGFYERDGYTFDVGSSVMFGFS 183
Query: 1521 DKGNLNLITQALAAVGCEMQVIPDPTTVHFHLPNNLSVRVHREYSDFIEELISKFPHEKE 1342
DKGNLNLITQALAAVGC+M VIPDP+TVHFHLPNNLSV VHREY+DFI EL S+FPHEKE
Sbjct: 184 DKGNLNLITQALAAVGCKMDVIPDPSTVHFHLPNNLSVLVHREYTDFISELTSRFPHEKE 243
Query: 1341 GINKFYSECWKIFNALNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGNIARKFI 1162
GI KFY CWKIFNALNSLELKSLEEP+YLFGQFF+KP+ECLTLAYYLPQNAG+IAR FI
Sbjct: 244 GILKFYDVCWKIFNALNSLELKSLEEPIYLFGQFFKKPVECLTLAYYLPQNAGSIARNFI 303
Query: 1161 KDPEVLSFIDAECFIVSTVNALQTPMINASMVLCDRHFXXXXXXXXXXXXIAKSLAKGLI 982
KDPEVLSFIDAECFIVSTVNALQTPMINA MVLCDRHF IAKSLAKGL+
Sbjct: 304 KDPEVLSFIDAECFIVSTVNALQTPMINAGMVLCDRHFGGINYPVGGVGGIAKSLAKGLV 363
Query: 981 DQGSNILYRANVTNIILEHGKAVGVKLSDGREFFSKTIISNATRWDTFGKLLKKQDLPKE 802
DQGS ILY+ANVT+II+++GKAVGVKLSDGREF +KTIISNATRWDTFGKLLKKQDLPKE
Sbjct: 364 DQGSEILYKANVTSIIIDNGKAVGVKLSDGREFLAKTIISNATRWDTFGKLLKKQDLPKE 423
Query: 801 EENFQRVYVKAPSFLSIHMGVKADVLPPDTDCHHFVLENGWDSLEEPYGSIFLSIPTILD 622
EENFQ+VYVKAPSFLSIHMGVKA+VLPPDTDCHHFVLE+ W +LE PYGSIFLSIPTILD
Sbjct: 424 EENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWKNLEAPYGSIFLSIPTILD 483
Query: 621 SSLAPEGRHILHIFTTSCMEDWKGLPQKEYEAKKELVADVIISRLEKKLFPGLKASIVFK 442
SSLAP GRHILHIFTTS +EDW+GL K+YEAKK+LVAD IISRLE KLFPGLK+SI F
Sbjct: 484 SSLAPRGRHILHIFTTSSIEDWQGLSTKDYEAKKQLVADKIISRLENKLFPGLKSSIEFI 543
Query: 441 EIGTPKTHRRYLARDNGTYGPMPRTIPKGLLGMPFNTTAVDGLYCVGDSCFPGQGVIAVA 262
E+GTPKTHRRYLARD+GTYGPMPR+IPKGLLGMPFNTTA++GLYCVGDSCFPGQGVIAVA
Sbjct: 544 EVGTPKTHRRYLARDSGTYGPMPRSIPKGLLGMPFNTTAINGLYCVGDSCFPGQGVIAVA 603
Query: 261 FSGVMCAHRVAADIGLEKKSPILDAVLLRLLGWFRTLA 148
FSGVMCAHRVAAD+GLEKKSP+LDA LL +LGW R+LA
Sbjct: 604 FSGVMCAHRVAADVGLEKKSPVLDAGLLGILGWLRSLA 641