BLASTX nr result

ID: Coptis23_contig00018053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018053
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281862.2| PREDICTED: guanine nucleotide-binding protei...    62   4e-08
emb|CBI20732.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_002516152.1| GTP-binding protein (p) alpha subunit, gpa1,...    58   9e-07
ref|XP_002324197.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
gb|ACF48819.1| G protein alpha subunit [Gossypium hirsutum]            56   3e-06

>ref|XP_002281862.2| PREDICTED: guanine nucleotide-binding protein alpha-1 subunit
           [Vitis vinifera]
          Length = 392

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = +3

Query: 129 LLIQKMGSLCSKHHHYNEADLEENAQAAEIERRIAQE 239
           ++I++MGS+CS+H HY+EAD EENAQAAEIERRI QE
Sbjct: 4   IVIERMGSICSRHKHYHEADAEENAQAAEIERRIEQE 40


>emb|CBI20732.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +3

Query: 144 MGSLCSKHHHYNEADLEENAQAAEIERRIAQE 239
           MGS+CS+H HY+EAD EENAQAAEIERRI QE
Sbjct: 1   MGSICSRHKHYHEADAEENAQAAEIERRIEQE 32


>ref|XP_002516152.1| GTP-binding protein (p) alpha subunit, gpa1, putative [Ricinus
           communis] gi|223544638|gb|EEF46154.1| GTP-binding
           protein (p) alpha subunit, gpa1, putative [Ricinus
           communis]
          Length = 392

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +3

Query: 132 LIQKMGSLCSKHHHYNEADLEENAQAAEIERRIAQE 239
           ++  MGSLCSK   YNEAD EENAQAAEIERRI QE
Sbjct: 5   VVHNMGSLCSKQRRYNEADAEENAQAAEIERRIEQE 40


>ref|XP_002324197.1| predicted protein [Populus trichocarpa] gi|222865631|gb|EEF02762.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/32 (84%), Positives = 27/32 (84%)
 Frame = +3

Query: 144 MGSLCSKHHHYNEADLEENAQAAEIERRIAQE 239
           MG LCSK H YNEAD EENAQAAEIERRI QE
Sbjct: 1   MGLLCSKRHRYNEADTEENAQAAEIERRIEQE 32


>gb|ACF48819.1| G protein alpha subunit [Gossypium hirsutum]
          Length = 392

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = +3

Query: 132 LIQKMGSLCSKHHHYNEADLEENAQAAEIERRIAQE 239
           +++ MG LCSK+H Y EAD EENAQAAEI+RRI QE
Sbjct: 5   VLENMGLLCSKNHRYTEADAEENAQAAEIDRRIEQE 40


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