BLASTX nr result

ID: Coptis23_contig00018050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018050
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886372.1| hypothetical protein ARALYDRAFT_474957 [Arab...   317   8e-85
emb|CBI34392.3| unnamed protein product [Vitis vinifera]              314   9e-84
ref|NP_176582.2| meiotic recombination protein SPO11-2 [Arabidop...   313   2e-83
ref|XP_004143970.1| PREDICTED: meiotic recombination protein SPO...   312   3e-83
ref|XP_003538691.1| PREDICTED: meiotic recombination protein SPO...   310   1e-82

>ref|XP_002886372.1| hypothetical protein ARALYDRAFT_474957 [Arabidopsis lyrata subsp.
           lyrata] gi|297332213|gb|EFH62631.1| hypothetical protein
           ARALYDRAFT_474957 [Arabidopsis lyrata subsp. lyrata]
          Length = 383

 Score =  317 bits (813), Expect = 8e-85
 Identities = 149/206 (72%), Positives = 180/206 (87%)
 Frame = +1

Query: 1   LKCTRQSLGIIASSRGLIAGRITLQEDDSNIVDCSLCGSSGYPITGDLNLLNTLIIKSDA 180
           L+C+R SLGI+ASSRGL+AGR+ LQE     VDCS CGSSG+ ITGDLNLL+  I++SDA
Sbjct: 151 LRCSRYSLGIMASSRGLVAGRLFLQEPGKEAVDCSACGSSGFTITGDLNLLDNTIMRSDA 210

Query: 181 RYIVVIEKHAIFQRLAEDRVFNKIPCVLITAKGYPDIATRLLLHRISRIYPSLPILALVD 360
           RYI+++EKHAIF RL EDRVFN IPCV ITAKGYPDIATR  LHR+S  +P+LPILALVD
Sbjct: 211 RYIIIVEKHAIFHRLVEDRVFNHIPCVFITAKGYPDIATRFFLHRMSTTFPNLPILALVD 270

Query: 361 WNPAGLAIICTYKYGSIGMGLEAYRYACDVKWLGLRGDDLRLVPEEALAQLKPKDLQIAK 540
           WNPAGLAI+CT+K+GSIGMGLEAYRYAC+VKW+GLRGDDL L+P+E+L  LKPKD QIAK
Sbjct: 271 WNPAGLAILCTFKFGSIGMGLEAYRYACNVKWIGLRGDDLNLIPDESLVPLKPKDSQIAK 330

Query: 541 SLMSSEMLQDEYKEELELMVRSCERA 618
           SL+SS++LQD Y++EL LMV++ +RA
Sbjct: 331 SLLSSKILQDNYRDELSLMVQTGKRA 356


>emb|CBI34392.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  314 bits (804), Expect = 9e-84
 Identities = 149/206 (72%), Positives = 182/206 (88%)
 Frame = +1

Query: 1   LKCTRQSLGIIASSRGLIAGRITLQEDDSNIVDCSLCGSSGYPITGDLNLLNTLIIKSDA 180
           L+C+R SLGI+ASSRG + GR+ LQ   S  VDCS CGSSG+ I+GD+NLL  +++K+DA
Sbjct: 149 LRCSRYSLGIMASSRGAVTGRLLLQAFISETVDCSACGSSGHAISGDMNLLERMVMKTDA 208

Query: 181 RYIVVIEKHAIFQRLAEDRVFNKIPCVLITAKGYPDIATRLLLHRISRIYPSLPILALVD 360
           RYI+V+EKHAIFQRLAEDRVFN+IP +LITAKGYPDIATR LL+R+SR +P LPILALVD
Sbjct: 209 RYIIVVEKHAIFQRLAEDRVFNQIPSILITAKGYPDIATRFLLYRMSRAFPDLPILALVD 268

Query: 361 WNPAGLAIICTYKYGSIGMGLEAYRYACDVKWLGLRGDDLRLVPEEALAQLKPKDLQIAK 540
           WNPAGLAI+CT+K+GSIGMGLEAYRYAC+VKWLGLRGDDL+L+PEE+L  LKP+DLQIAK
Sbjct: 269 WNPAGLAILCTFKFGSIGMGLEAYRYACNVKWLGLRGDDLQLIPEESLIPLKPRDLQIAK 328

Query: 541 SLMSSEMLQDEYKEELELMVRSCERA 618
           SL SSE+L++ Y+ ELE+MV+S  RA
Sbjct: 329 SLKSSEILEENYRNELEVMVQSGRRA 354


>ref|NP_176582.2| meiotic recombination protein SPO11-2 [Arabidopsis thaliana]
           gi|75335899|sp|Q9M4A1.1|SPO12_ARATH RecName:
           Full=Meiotic recombination protein SPO11-2;
           Short=AtSPO11-2 gi|7270977|emb|CAB81545.1| putative
           topoisomerase VIA [Arabidopsis thaliana]
           gi|91806019|gb|ABE65738.1| DNA topoisomerase VIA
           [Arabidopsis thaliana] gi|332196057|gb|AEE34178.1|
           meiotic recombination protein SPO11-2 [Arabidopsis
           thaliana]
          Length = 383

 Score =  313 bits (802), Expect = 2e-83
 Identities = 148/206 (71%), Positives = 177/206 (85%)
 Frame = +1

Query: 1   LKCTRQSLGIIASSRGLIAGRITLQEDDSNIVDCSLCGSSGYPITGDLNLLNTLIIKSDA 180
           L+C+R SLGI+ASSRGL+AGR+ LQE     VDCS CGSSG+ ITGDLNLL+  I+++DA
Sbjct: 151 LRCSRYSLGIMASSRGLVAGRLFLQEPGKEAVDCSACGSSGFAITGDLNLLDNTIMRTDA 210

Query: 181 RYIVVIEKHAIFQRLAEDRVFNKIPCVLITAKGYPDIATRLLLHRISRIYPSLPILALVD 360
           RYI+++EKHAIF RL EDRVFN IPCV ITAKGYPDIATR  LHR+S  +P LPIL LVD
Sbjct: 211 RYIIIVEKHAIFHRLVEDRVFNHIPCVFITAKGYPDIATRFFLHRMSTTFPDLPILVLVD 270

Query: 361 WNPAGLAIICTYKYGSIGMGLEAYRYACDVKWLGLRGDDLRLVPEEALAQLKPKDLQIAK 540
           WNPAGLAI+CT+K+GSIGMGLEAYRYAC+VKW+GLRGDDL L+PEE+L  LKPKD QIAK
Sbjct: 271 WNPAGLAILCTFKFGSIGMGLEAYRYACNVKWIGLRGDDLNLIPEESLVPLKPKDSQIAK 330

Query: 541 SLMSSEMLQDEYKEELELMVRSCERA 618
           SL+SS++LQ+ Y EEL LMV++ +RA
Sbjct: 331 SLLSSKILQENYIEELSLMVQTGKRA 356


>ref|XP_004143970.1| PREDICTED: meiotic recombination protein SPO11-2-like [Cucumis
           sativus]
          Length = 384

 Score =  312 bits (800), Expect = 3e-83
 Identities = 144/206 (69%), Positives = 182/206 (88%)
 Frame = +1

Query: 1   LKCTRQSLGIIASSRGLIAGRITLQEDDSNIVDCSLCGSSGYPITGDLNLLNTLIIKSDA 180
           L+C+R SLGI+ASSRGL+AGR+ LQE +  +VDC+ CGSSGYPI+GDL+LL TL +K+DA
Sbjct: 152 LQCSRYSLGIMASSRGLVAGRLLLQEPEQEVVDCTACGSSGYPISGDLDLLQTLTLKTDA 211

Query: 181 RYIVVIEKHAIFQRLAEDRVFNKIPCVLITAKGYPDIATRLLLHRISRIYPSLPILALVD 360
           RYI+VIEKHAIFQRLA+DRVFN+IP +LITAKGYPD+ATR  LH+I + +  LP+  LVD
Sbjct: 212 RYIIVIEKHAIFQRLADDRVFNRIPSILITAKGYPDLATRYFLHKICKTFSHLPMFGLVD 271

Query: 361 WNPAGLAIICTYKYGSIGMGLEAYRYACDVKWLGLRGDDLRLVPEEALAQLKPKDLQIAK 540
           WNPAGLAI+CT+KYGSIGMGLEAYRYAC+VKWLG+RGDDL+L+P+E+L  LKP+DLQIAK
Sbjct: 272 WNPAGLAILCTFKYGSIGMGLEAYRYACNVKWLGVRGDDLQLIPQESLVPLKPRDLQIAK 331

Query: 541 SLMSSEMLQDEYKEELELMVRSCERA 618
           SL+SS++LQ+ Y++EL LMV   ++A
Sbjct: 332 SLLSSKILQENYRQELTLMVERGQKA 357


>ref|XP_003538691.1| PREDICTED: meiotic recombination protein SPO11-2-like [Glycine max]
          Length = 382

 Score =  310 bits (794), Expect = 1e-82
 Identities = 147/206 (71%), Positives = 180/206 (87%)
 Frame = +1

Query: 1   LKCTRQSLGIIASSRGLIAGRITLQEDDSNIVDCSLCGSSGYPITGDLNLLNTLIIKSDA 180
           L+C+R SLGI+ASSRGL+AGR+ LQE     VDCSLCGSSG+ I+GDLNLL++L++ +DA
Sbjct: 150 LRCSRFSLGIMASSRGLVAGRLILQEPGKEAVDCSLCGSSGFAISGDLNLLDSLVLNADA 209

Query: 181 RYIVVIEKHAIFQRLAEDRVFNKIPCVLITAKGYPDIATRLLLHRISRIYPSLPILALVD 360
           RY++++EKHAIFQRL EDR F++IP +LITAKGYPDIATR LL+RIS+ +P LPILALVD
Sbjct: 210 RYVIIVEKHAIFQRLTEDRFFHQIPSILITAKGYPDIATRFLLYRISKAFPDLPILALVD 269

Query: 361 WNPAGLAIICTYKYGSIGMGLEAYRYACDVKWLGLRGDDLRLVPEEALAQLKPKDLQIAK 540
           WNPAGLAI+CT+K+GSIGMGLEAYRYAC+VKWLGLRG DL L+P ++   LKPKDLQIA+
Sbjct: 270 WNPAGLAILCTFKFGSIGMGLEAYRYACNVKWLGLRGHDLPLLPNQSFVPLKPKDLQIAQ 329

Query: 541 SLMSSEMLQDEYKEELELMVRSCERA 618
           SLMSS +LQD YKEE+ LMV+S  RA
Sbjct: 330 SLMSSGILQDNYKEEVALMVQSGRRA 355


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