BLASTX nr result

ID: Coptis23_contig00018048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018048
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    82   9e-14
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    79   6e-13
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    75   1e-11
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    73   4e-11

>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 54/172 (31%), Positives = 83/172 (48%)
 Frame = +3

Query: 102 QWVKPPADTIKINSDXXXXXXXXXXXXXLRNHEGAPLIVFMGNTNLRSVIIQELKGIEAG 281
           +W KP     K+N+D             LR++ G P+  F+       V + EL  I  G
Sbjct: 307 EWTKPEFGWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIWRG 366

Query: 282 LLAACYMNCKRIMLESDSLRAVNVINRKEDCPWYCWDLVESIRKNMRLFETVVVTHVYRE 461
           L+ +  +  K I +ESDS+  V  +NRK+ CP      +  I K ++ F+   ++H +RE
Sbjct: 367 LVLSLGLGIKAIWVESDSMSVVRTVNRKQLCP-KAVGYLNQIWKLLKKFDKYQISHSWRE 425

Query: 462 MNRVADWLAKSSTVRDRINSCVSLGTIYSTPPLVYELFVIVEEDARGMMYQR 617
            NR AD LAK     D + + V L  +   P     L  I+E+DA+G  Y+R
Sbjct: 426 TNRAADHLAK----MDLLANDVVLSPVDFPP----SLSRIIEDDAKGTKYRR 469


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 7/178 (3%)
 Frame = +3

Query: 105 WVKPPADTIKINSDXXXXXXXXXXXXXLRNHEGAPLIVFMGNTNLRSVIIQELKGIEAGL 284
           W KP     K+N+D              R+H G P+  +    +   + + EL  I  GL
Sbjct: 268 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 327

Query: 285 LAACYMNCKRIMLESDSLRAVNVINRKE-------DCPWYCWDLVESIRKNMRLFETVVV 443
           + A  +  K I +ESDS+ AV  INRK+        C  + W L+E        FE  +V
Sbjct: 328 VLASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEK-------FEKYLV 380

Query: 444 THVYREMNRVADWLAKSSTVRDRINSCVSLGTIYSTPPLVYELFVIVEEDARGMMYQR 617
           +H +RE N+ AD+L+K     D   + V LG    T      L  I+++DA G MY+R
Sbjct: 381 SHTWRETNKAADFLSK----MDLSGNDVVLG----TADFPNGLNSIIKDDAEGRMYRR 430


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 52/172 (30%), Positives = 83/172 (48%)
 Frame = +3

Query: 102 QWVKPPADTIKINSDXXXXXXXXXXXXXLRNHEGAPLIVFMGNTNLRSVIIQELKGIEAG 281
           QW +P    IK+N+D              R++EG  +  F+   +   + + EL  I  G
Sbjct: 166 QWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWRG 225

Query: 282 LLAACYMNCKRIMLESDSLRAVNVINRKEDCPWYCWDLVESIRKNMRLFETVVVTHVYRE 461
           L+ A  ++ + + +ESDSL  VN INR++         ++ IR  ++ F+   V+H +RE
Sbjct: 226 LVLALNLHIQVLWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWRE 285

Query: 462 MNRVADWLAKSSTVRDRINSCVSLGTIYSTPPLVYELFVIVEEDARGMMYQR 617
            NR AD+LAK    RD +       T          L  I+++DA GM+Y R
Sbjct: 286 TNRAADYLAKMVVERDVVLWPADFPT---------SLNNIIKDDAEGMVYCR 328


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 52/171 (30%), Positives = 77/171 (45%)
 Frame = +3

Query: 105 WVKPPADTIKINSDXXXXXXXXXXXXXLRNHEGAPLIVFMGNTNLRSVIIQELKGIEAGL 284
           W KP     K+N+D              R+H G P+  +    +   + + EL  I  GL
Sbjct: 155 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 214

Query: 285 LAACYMNCKRIMLESDSLRAVNVINRKEDCPWYCWDLVESIRKNMRLFETVVVTHVYREM 464
           + A  +  K I +ESDS+  V  INRK+         +  I   +  FE   V+H +RE 
Sbjct: 215 VLASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRET 274

Query: 465 NRVADWLAKSSTVRDRINSCVSLGTIYSTPPLVYELFVIVEEDARGMMYQR 617
           N+ AD+L++     D   S V LG    T      L  I+++DA G MY+R
Sbjct: 275 NKAADFLSR----MDLSGSDVVLG----TADFPNGLNSIIKDDAEGRMYRR 317


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 53/171 (30%), Positives = 80/171 (46%)
 Frame = +3

Query: 105 WVKPPADTIKINSDXXXXXXXXXXXXXLRNHEGAPLIVFMGNTNLRSVIIQELKGIEAGL 284
           W KP    IK+N+D             LR++EG  +  F+    L  + + EL  I  GL
Sbjct: 274 WKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGL 333

Query: 285 LAACYMNCKRIMLESDSLRAVNVINRKEDCPWYCWDLVESIRKNMRLFETVVVTHVYREM 464
           + A  +  K I +ESDS+ AV  INR +         +  I   ++ FE   V+H +RE 
Sbjct: 334 VLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWRET 393

Query: 465 NRVADWLAKSSTVRDRINSCVSLGTIYSTPPLVYELFVIVEEDARGMMYQR 617
           N+ AD+L+K    R   N  V     + T      L  I+++DA+G +Y R
Sbjct: 394 NKAADYLSKMVLER---NDVVLWPVHFPT-----TLQNIIKDDAQGRIYCR 436


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