BLASTX nr result

ID: Coptis23_contig00018041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018041
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278464.1| PREDICTED: probable cyclic nucleotide-gated ...    68   9e-10
ref|XP_003540100.1| PREDICTED: probable cyclic nucleotide-gated ...    67   2e-09
ref|XP_002325129.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_004168115.1| PREDICTED: probable cyclic nucleotide-gated ...    66   3e-09
ref|XP_004144729.1| PREDICTED: probable cyclic nucleotide-gated ...    66   3e-09

>ref|XP_002278464.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5 [Vitis
           vinifera] gi|297743648|emb|CBI36531.3| unnamed protein
           product [Vitis vinifera]
          Length = 743

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/43 (79%), Positives = 37/43 (86%)
 Frame = -2

Query: 301 AAIYASRFAKNALRGVYRLRNTKSAMELVKLQKPPEPDFTADE 173
           A I ASRFA NALRGV+R R TKSA ELVKLQKPPEPDF+AD+
Sbjct: 699 ATILASRFAANALRGVHRNRITKSARELVKLQKPPEPDFSADD 741


>ref|XP_003540100.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5-like
           [Glycine max]
          Length = 732

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/43 (76%), Positives = 35/43 (81%)
 Frame = -2

Query: 301 AAIYASRFAKNALRGVYRLRNTKSAMELVKLQKPPEPDFTADE 173
           A   ASRFA NALRGV+R R  KSA ELVKLQKPPEPDFTAD+
Sbjct: 688 ATFLASRFAANALRGVHRNREAKSARELVKLQKPPEPDFTADD 730


>ref|XP_002325129.1| predicted protein [Populus trichocarpa] gi|222866563|gb|EEF03694.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = -2

Query: 301 AAIYASRFAKNALRGVYRLRNTKSAMELVKLQKPPEPDFTADE 173
           A   A+RFA NALRG++R RN K+A ELVKLQKPPEPDFTAD+
Sbjct: 689 ATFLATRFAANALRGIHRNRNAKTARELVKLQKPPEPDFTADD 731


>ref|XP_004168115.1| PREDICTED: probable cyclic nucleotide-gated ion channel 6-like,
           partial [Cucumis sativus]
          Length = 711

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/43 (72%), Positives = 35/43 (81%)
 Frame = -2

Query: 301 AAIYASRFAKNALRGVYRLRNTKSAMELVKLQKPPEPDFTADE 173
           A   AS+FA NALRGV R RN KSA EL+KLQKPPEPDF+AD+
Sbjct: 667 ATFLASKFAANALRGVQRYRNAKSAQELIKLQKPPEPDFSADD 709


>ref|XP_004144729.1| PREDICTED: probable cyclic nucleotide-gated ion channel 6-like
           [Cucumis sativus]
          Length = 731

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/43 (72%), Positives = 35/43 (81%)
 Frame = -2

Query: 301 AAIYASRFAKNALRGVYRLRNTKSAMELVKLQKPPEPDFTADE 173
           A   AS+FA NALRGV R RN KSA EL+KLQKPPEPDF+AD+
Sbjct: 687 ATFLASKFAANALRGVQRYRNAKSAQELIKLQKPPEPDFSADD 729


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