BLASTX nr result

ID: Coptis23_contig00018016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018016
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98196.1|AC000107_19 F17F8.23 [Arabidopsis thaliana]              80   2e-13
ref|NP_174375.1| vacuolar sorting receptor 6 [Arabidopsis thalia...    80   2e-13
ref|XP_002890913.1| hypothetical protein ARALYDRAFT_313733 [Arab...    80   2e-13
ref|XP_002869948.1| hypothetical protein ARALYDRAFT_492857 [Arab...    77   1e-12
ref|XP_002297915.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>gb|AAF98196.1|AC000107_19 F17F8.23 [Arabidopsis thaliana]
          Length = 649

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/62 (61%), Positives = 44/62 (70%)
 Frame = -2

Query: 191 GCISFGDGFRFRSSRPTILLLDRGECYFALKVWNXXXXXXXXXXXADNIDEPLITMDSPE 12
           GC SF   F+ +  RPTIL++DRGECYFALKVWN           ADN+DEPLITMDSPE
Sbjct: 75  GCDSFDKTFKPKFPRPTILIIDRGECYFALKVWNGQQSGVAAVLVADNVDEPLITMDSPE 134

Query: 11  EN 6
           E+
Sbjct: 135 ES 136


>ref|NP_174375.1| vacuolar sorting receptor 6 [Arabidopsis thaliana]
           gi|374095475|sp|Q9FYH7.3|VSR6_ARATH RecName:
           Full=Vacuolar-sorting receptor 6; Short=AtVSR6; AltName:
           Full=BP80-like protein d; Short=AtBP80d; AltName:
           Full=Epidermal growth factor receptor-like protein 6;
           Short=AtELP6; Flags: Precursor
           gi|332193170|gb|AEE31291.1| vacuolar sorting receptor 6
           [Arabidopsis thaliana]
          Length = 631

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/62 (61%), Positives = 44/62 (70%)
 Frame = -2

Query: 191 GCISFGDGFRFRSSRPTILLLDRGECYFALKVWNXXXXXXXXXXXADNIDEPLITMDSPE 12
           GC SF   F+ +  RPTIL++DRGECYFALKVWN           ADN+DEPLITMDSPE
Sbjct: 75  GCDSFDKTFKPKFPRPTILIIDRGECYFALKVWNGQQSGVAAVLVADNVDEPLITMDSPE 134

Query: 11  EN 6
           E+
Sbjct: 135 ES 136


>ref|XP_002890913.1| hypothetical protein ARALYDRAFT_313733 [Arabidopsis lyrata subsp.
           lyrata] gi|297336755|gb|EFH67172.1| hypothetical protein
           ARALYDRAFT_313733 [Arabidopsis lyrata subsp. lyrata]
          Length = 631

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/62 (61%), Positives = 44/62 (70%)
 Frame = -2

Query: 191 GCISFGDGFRFRSSRPTILLLDRGECYFALKVWNXXXXXXXXXXXADNIDEPLITMDSPE 12
           GC SF   F+ +  RPTIL++DRGECYFALKVWN           ADN+DEPLITMDSPE
Sbjct: 75  GCDSFDKTFKPKFPRPTILIIDRGECYFALKVWNGQQSGAAAVLVADNVDEPLITMDSPE 134

Query: 11  EN 6
           E+
Sbjct: 135 ES 136


>ref|XP_002869948.1| hypothetical protein ARALYDRAFT_492857 [Arabidopsis lyrata subsp.
           lyrata] gi|297315784|gb|EFH46207.1| hypothetical protein
           ARALYDRAFT_492857 [Arabidopsis lyrata subsp. lyrata]
          Length = 625

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/64 (57%), Positives = 44/64 (68%)
 Frame = -2

Query: 197 STGCISFGDGFRFRSSRPTILLLDRGECYFALKVWNXXXXXXXXXXXADNIDEPLITMDS 18
           S GC +FG  F+ +  RPTILLLDRG CYFALK W+           ADN+DEPL+TMDS
Sbjct: 74  SDGCSAFGKTFKPKFPRPTILLLDRGGCYFALKAWHAQQAGAAAVLVADNVDEPLLTMDS 133

Query: 17  PEEN 6
           PEE+
Sbjct: 134 PEES 137


>ref|XP_002297915.1| predicted protein [Populus trichocarpa] gi|222845173|gb|EEE82720.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/68 (60%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
 Frame = -2

Query: 197 STGCISFGDG---FRFRSSRPTILLLDRGECYFALKVWNXXXXXXXXXXXADNIDEPLIT 27
           + GC  F DG   F+ + SRPTILLLDRGECYFALK WN           AD+IDEPLIT
Sbjct: 73  ANGCQPF-DGDKPFKSKGSRPTILLLDRGECYFALKAWNAQQAGAAAVLVADSIDEPLIT 131

Query: 26  MDSPEENN 3
           MDSPE++N
Sbjct: 132 MDSPEQSN 139


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